RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 IQSEC2Q5JU85 1478 aa20.56■□□□□ 0.88
SNRPF-205ENST00000553192 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
SNRPF-205ENST00000553192 RAPGEF6Q8TEU7 1601 aa20.56■□□□□ 0.88
SNRPF-205ENST00000553192 NUP153P49790 1475 aaKnown RBP20.56■□□□□ 0.88
SNRPF-205ENST00000553192 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
SNRPF-205ENST00000553192 UHRF1BP1Q6BDS2 1440 aa20.55■□□□□ 0.88
SNRPF-205ENST00000553192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.53■□□□□ 0.886e-17■■□□□ 13.5
SNRPF-205ENST00000553192 CFAP74Q9C0B2 1584 aa20.51■□□□□ 0.87
SNRPF-205ENST00000553192 ATP10AO60312 1499 aa20.5■□□□□ 0.87
SNRPF-205ENST00000553192 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
SNRPF-205ENST00000553192 C9orf84Q5VXU9 1444 aa20.48■□□□□ 0.87
SNRPF-205ENST00000553192 SCAPERQ9BY12 1400 aa20.48■□□□□ 0.87
SNRPF-205ENST00000553192 SAMD9Q5K651 1589 aa20.47■□□□□ 0.87
SNRPF-205ENST00000553192 SETD1BQ9UPS6 1966 aaKnown RBP20.43■□□□□ 0.86
SNRPF-205ENST00000553192 NCOA1Q15788 1441 aa20.43■□□□□ 0.86
SNRPF-205ENST00000553192 UBAP1LF5GYI3 381 aa20.41■□□□□ 0.86
SNRPF-205ENST00000553192 PLCH2O75038 1416 aa20.38■□□□□ 0.85
SNRPF-205ENST00000553192 ZNF335Q9H4Z2 1342 aaPredicted RBP20.37■□□□□ 0.85
SNRPF-205ENST00000553192 TRAPPC8Q9Y2L5 1435 aa20.36■□□□□ 0.85
SNRPF-205ENST00000553192 MED1Q15648 1581 aaPredicted RBP20.34■□□□□ 0.85
SNRPF-205ENST00000553192 C3P01024 1663 aa20.34■□□□□ 0.85
SNRPF-205ENST00000553192 HSPA1LP34931 641 aa20.3■□□□□ 0.84
SNRPF-205ENST00000553192 AFAP1Q8N556 730 aa20.3■□□□□ 0.84
SNRPF-205ENST00000553192 NCKAP5LQ9HCH0 1330 aa20.28■□□□□ 0.84
SNRPF-205ENST00000553192 CAMSAP1Q5T5Y3 1602 aa20.28■□□□□ 0.84
SNRPF-205ENST00000553192 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
SNRPF-205ENST00000553192 KDM5CP41229 1560 aa20.27■□□□□ 0.84
SNRPF-205ENST00000553192 DIP2CQ9Y2E4 1556 aa20.27■□□□□ 0.84
SNRPF-205ENST00000553192 REREQ9P2R6 1566 aa20.26■□□□□ 0.83
SNRPF-205ENST00000553192 ZNF518AQ6AHZ1 1483 aa20.26■□□□□ 0.83
SNRPF-205ENST00000553192 RANGAP1P46060 587 aaPredicted RBP20.25■□□□□ 0.83
SNRPF-205ENST00000553192 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
SNRPF-205ENST00000553192 AGLP35573 1532 aa20.22■□□□□ 0.83
SNRPF-205ENST00000553192 ABCA6Q8N139 1617 aa20.2■□□□□ 0.82
SNRPF-205ENST00000553192 ESF1Q9H501 851 aaKnown RBP20.2■□□□□ 0.82
SNRPF-205ENST00000553192 MYT1LQ9UL68 1186 aa20.19■□□□□ 0.82
SNRPF-205ENST00000553192 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
SNRPF-205ENST00000553192 NPATQ14207 1427 aa20.18■□□□□ 0.82
SNRPF-205ENST00000553192 CNTLNQ9NXG0 1405 aa20.18■□□□□ 0.82
SNRPF-205ENST00000553192 PIP4K2BP78356 416 aa20.17■□□□□ 0.82
SNRPF-205ENST00000553192 TCOF1Q13428 1488 aaKnown RBP20.17■□□□□ 0.82
SNRPF-205ENST00000553192 PKD2Q13563 968 aa20.16■□□□□ 0.82
SNRPF-205ENST00000553192 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
SNRPF-205ENST00000553192 MYO5CQ9NQX4 1742 aa20.16■□□□□ 0.82
SNRPF-205ENST00000553192 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
SNRPF-205ENST00000553192 PLA2R1Q13018 1463 aa20.15■□□□□ 0.82
SNRPF-205ENST00000553192 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
SNRPF-205ENST00000553192 ZMYM3Q14202 1370 aa20.12■□□□□ 0.81
SNRPF-205ENST00000553192 ARHGAP5Q13017 1502 aa20.12■□□□□ 0.81
SNRPF-205ENST00000553192 TOM1O60784 492 aa20.11■□□□□ 0.81
SNRPF-205ENST00000553192 PPP6R1Q9UPN7 881 aa20.11■□□□□ 0.81
SNRPF-205ENST00000553192 KIF14Q15058 1648 aa20.11■□□□□ 0.81
SNRPF-205ENST00000553192 MROH2AA6NES4 1674 aa20.06■□□□□ 0.8
SNRPF-205ENST00000553192 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
SNRPF-205ENST00000553192 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
SNRPF-205ENST00000553192 ALKQ9UM73 1620 aa20.05■□□□□ 0.8
SNRPF-205ENST00000553192 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
SNRPF-205ENST00000553192 RGS17Q9UGC6 210 aaPredicted RBP20.04■□□□□ 0.8
SNRPF-205ENST00000553192 PTPRKQ15262 1439 aa20.03■□□□□ 0.8
SNRPF-205ENST00000553192 KIDINS220Q9ULH0 1771 aa20.03■□□□□ 0.8
SNRPF-205ENST00000553192 TROQ12816 1431 aaPredicted RBP20.02■□□□□ 0.8
SNRPF-205ENST00000553192 CPS1P31327 1500 aa20.02■□□□□ 0.79
SNRPF-205ENST00000553192 ABCC1P33527 1531 aa20.02■□□□□ 0.79
SNRPF-205ENST00000553192 CDK11AQ9UQ88 783 aaPredicted RBP20■□□□□ 0.79
SNRPF-205ENST00000553192 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
SNRPF-205ENST00000553192 ATP1B4Q9UN42 357 aaPredicted RBP19.99■□□□□ 0.79
SNRPF-205ENST00000553192 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
SNRPF-205ENST00000553192 ITSN2Q9NZM3 1697 aa19.95■□□□□ 0.78
SNRPF-205ENST00000553192 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
SNRPF-205ENST00000553192 CLTCQ00610 1675 aaKnown RBP19.94■□□□□ 0.78
SNRPF-205ENST00000553192 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
SNRPF-205ENST00000553192 CLIP1P30622 1438 aa19.93■□□□□ 0.78
SNRPF-205ENST00000553192 A2ML1A8K2U0 1454 aa19.92■□□□□ 0.78
SNRPF-205ENST00000553192 DNMT1P26358 1616 aaKnown RBP19.92■□□□□ 0.78
SNRPF-205ENST00000553192 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
SNRPF-205ENST00000553192 SAMD9LQ8IVG5 1584 aa19.91■□□□□ 0.78
SNRPF-205ENST00000553192 VWDEQ8N2E2 1590 aa19.91■□□□□ 0.78
SNRPF-205ENST00000553192 PREX2Q70Z35 1606 aa19.91■□□□□ 0.78
SNRPF-205ENST00000553192 FMN1Q68DA7 1419 aa19.9■□□□□ 0.78
SNRPF-205ENST00000553192 GGT6Q6P531 493 aa19.87■□□□□ 0.77
SNRPF-205ENST00000553192 PLXNC1O60486 1568 aa19.87■□□□□ 0.77
SNRPF-205ENST00000553192 POTEAQ6S8J7 498 aa19.86■□□□□ 0.77
SNRPF-205ENST00000553192 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
SNRPF-205ENST00000553192 A2MP01023 1474 aa19.84■□□□□ 0.77
SNRPF-205ENST00000553192 POLR1AO95602 1720 aaPredicted RBP19.83■□□□□ 0.77
SNRPF-205ENST00000553192 ARHGAP35Q9NRY4 1499 aa19.83■□□□□ 0.76
SNRPF-205ENST00000553192 EEA1Q15075 1411 aa19.83■□□□□ 0.76
SNRPF-205ENST00000553192 LRRIQ1Q96JM4 1722 aa19.82■□□□□ 0.76
SNRPF-205ENST00000553192 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.76
SNRPF-205ENST00000553192 FBXO31Q5XUX0 539 aaPredicted RBP19.8■□□□□ 0.76
SNRPF-205ENST00000553192 ATP7AQ04656 1500 aa19.8■□□□□ 0.76
SNRPF-205ENST00000553192 LRRC7Q96NW7 1537 aa19.8■□□□□ 0.76
SNRPF-205ENST00000553192 SYCP2Q9BX26 1530 aa19.8■□□□□ 0.76
SNRPF-205ENST00000553192 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.8■□□□□ 0.761e-6■■■■■ 38.1
SNRPF-205ENST00000553192 ANKLE2Q86XL3 938 aa19.79■□□□□ 0.76
SNRPF-205ENST00000553192 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
SNRPF-205ENST00000553192 NPHP4O75161 1426 aaPredicted RBP19.78■□□□□ 0.76
SNRPF-205ENST00000553192 MED14O60244 1454 aa19.78■□□□□ 0.76
SNRPF-205ENST00000553192 TNRQ92752 1358 aa19.77■□□□□ 0.76
SNRPF-205ENST00000553192 CDC42BPAQ5VT25 1732 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms