RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 FBXO41Q8TF61 875 aa20.22■□□□□ 0.83
CDK4-214ENST00000552862 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
CDK4-214ENST00000552862 ZNF518AQ6AHZ1 1483 aa20.22■□□□□ 0.83
CDK4-214ENST00000552862 RICTORQ6R327 1708 aa20.21■□□□□ 0.83
CDK4-214ENST00000552862 FRMPD1Q5SYB0 1578 aa20.2■□□□□ 0.82
CDK4-214ENST00000552862 KIF14Q15058 1648 aa20.2■□□□□ 0.82
CDK4-214ENST00000552862 CDK13Q14004 1512 aaKnown RBP20.19■□□□□ 0.82
CDK4-214ENST00000552862 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
CDK4-214ENST00000552862 C9orf84Q5VXU9 1444 aa20.18■□□□□ 0.82
CDK4-214ENST00000552862 TTC37Q6PGP7 1564 aa20.17■□□□□ 0.82
CDK4-214ENST00000552862 CASKIN1Q8WXD9 1431 aa20.17■□□□□ 0.82
CDK4-214ENST00000552862 ARHGAP5Q13017 1502 aa20.15■□□□□ 0.82
CDK4-214ENST00000552862 PCF11O94913 1555 aaKnown RBP20.15■□□□□ 0.82
CDK4-214ENST00000552862 MYO5CQ9NQX4 1742 aa20.15■□□□□ 0.82
CDK4-214ENST00000552862 MLECQ14165 292 aa20.14■□□□□ 0.81
CDK4-214ENST00000552862 MADDQ8WXG6 1647 aa20.13■□□□□ 0.81
CDK4-214ENST00000552862 YEATS2Q9ULM3 1422 aa20.11■□□□□ 0.81
CDK4-214ENST00000552862 AFAP1Q8N556 730 aa20.11■□□□□ 0.81
CDK4-214ENST00000552862 MLH3Q9UHC1 1453 aa20.09■□□□□ 0.81
CDK4-214ENST00000552862 LMTK3Q96Q04 1460 aa20.07■□□□□ 0.8
CDK4-214ENST00000552862 FYCO1Q9BQS8 1478 aa20.06■□□□□ 0.8
CDK4-214ENST00000552862 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
CDK4-214ENST00000552862 RIMS1Q86UR5 1692 aaKnown RBP20.06■□□□□ 0.8
CDK4-214ENST00000552862 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
CDK4-214ENST00000552862 PLEKHH2Q8IVE3 1493 aa20.04■□□□□ 0.8
CDK4-214ENST00000552862 CNTLNQ9NXG0 1405 aa20.03■□□□□ 0.8
CDK4-214ENST00000552862 KDM5CP41229 1560 aa20.03■□□□□ 0.8
CDK4-214ENST00000552862 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
CDK4-214ENST00000552862 ARHGEF12Q9NZN5 1544 aa20.02■□□□□ 0.8
CDK4-214ENST00000552862 CFDP1Q9UEE9 299 aaPredicted RBP20.02■□□□□ 0.8
CDK4-214ENST00000552862 REREQ9P2R6 1566 aa20.02■□□□□ 0.8
CDK4-214ENST00000552862 RSPH4AQ5TD94 716 aa20■□□□□ 0.79
CDK4-214ENST00000552862 UHRF1BP1Q6BDS2 1440 aa20■□□□□ 0.79
CDK4-214ENST00000552862 AGLP35573 1532 aa19.99■□□□□ 0.79
CDK4-214ENST00000552862 HSPA2P54652 639 aa19.99■□□□□ 0.79
CDK4-214ENST00000552862 ZNF777Q9ULD5 760 aaPredicted RBP19.99■□□□□ 0.79
CDK4-214ENST00000552862 KIAA1107Q9UPP5 1409 aa19.99■□□□□ 0.79
CDK4-214ENST00000552862 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
CDK4-214ENST00000552862 FER1L4A9Z1Z3 1794 aa19.98■□□□□ 0.79
CDK4-214ENST00000552862 MTUS2Q5JR59 1369 aa19.97■□□□□ 0.79
CDK4-214ENST00000552862 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
CDK4-214ENST00000552862 CERKQ8TCT0 537 aa19.95■□□□□ 0.78
CDK4-214ENST00000552862 PREX2Q70Z35 1606 aa19.94■□□□□ 0.78
CDK4-214ENST00000552862 TRAPPC8Q9Y2L5 1435 aa19.94■□□□□ 0.78
CDK4-214ENST00000552862 ABCC1P33527 1531 aa19.92■□□□□ 0.78
CDK4-214ENST00000552862 CEBPAP49715 358 aaPredicted RBP19.91■□□□□ 0.78
CDK4-214ENST00000552862 PREX1Q8TCU6 1659 aa19.91■□□□□ 0.78
CDK4-214ENST00000552862 CDC42BPBQ9Y5S2 1711 aa19.9■□□□□ 0.78
CDK4-214ENST00000552862 GPATCH8Q9UKJ3 1502 aaKnown RBP19.89■□□□□ 0.77
CDK4-214ENST00000552862 DIP2CQ9Y2E4 1556 aa19.88■□□□□ 0.77
CDK4-214ENST00000552862 NPATQ14207 1427 aa19.88■□□□□ 0.77
CDK4-214ENST00000552862 HNRNPMP52272 730 aaKnown RBP eCLIP19.88■□□□□ 0.77
CDK4-214ENST00000552862 PTPRTO14522 1441 aa19.85■□□□□ 0.77
CDK4-214ENST00000552862 ITSN2Q9NZM3 1697 aa19.83■□□□□ 0.76
CDK4-214ENST00000552862 RTEL1-TNFRSF6BF6WH68 1400 aa19.83■□□□□ 0.76
CDK4-214ENST00000552862 ZMYM3Q14202 1370 aa19.83■□□□□ 0.76
CDK4-214ENST00000552862 TSPY4P0CV99 314 aa19.82■□□□□ 0.76
CDK4-214ENST00000552862 TSPY10P0CW01 314 aa19.82■□□□□ 0.76
CDK4-214ENST00000552862 PKD2Q13563 968 aa19.81■□□□□ 0.76
CDK4-214ENST00000552862 SAMD9LQ8IVG5 1584 aa19.81■□□□□ 0.76
CDK4-214ENST00000552862 CDC42BPAQ5VT25 1732 aa19.81■□□□□ 0.76
CDK4-214ENST00000552862 LRRIQ1Q96JM4 1722 aa19.81■□□□□ 0.76
CDK4-214ENST00000552862 ABCA6Q8N139 1617 aa19.8■□□□□ 0.76
CDK4-214ENST00000552862 A2MP01023 1474 aa19.79■□□□□ 0.76
CDK4-214ENST00000552862 GGT6Q6P531 493 aa19.79■□□□□ 0.76
CDK4-214ENST00000552862 SIGLEC1Q9BZZ2 1709 aa19.79■□□□□ 0.76
CDK4-214ENST00000552862 CEP162Q5TB80 1403 aa19.78■□□□□ 0.76
CDK4-214ENST00000552862 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
CDK4-214ENST00000552862 EHBP1L1Q8N3D4 1523 aa19.77■□□□□ 0.76
CDK4-214ENST00000552862 ATP7AQ04656 1500 aa19.76■□□□□ 0.75
CDK4-214ENST00000552862 SYCP2Q9BX26 1530 aa19.76■□□□□ 0.75
CDK4-214ENST00000552862 MROH2AA6NES4 1674 aa19.75■□□□□ 0.75
CDK4-214ENST00000552862 DHX29Q7Z478 1369 aaKnown RBP19.73■□□□□ 0.75
CDK4-214ENST00000552862 IQSEC2Q5JU85 1478 aa19.73■□□□□ 0.75
CDK4-214ENST00000552862 C3P01024 1663 aa19.72■□□□□ 0.75
CDK4-214ENST00000552862 APLP2Q06481 763 aa19.71■□□□□ 0.75
CDK4-214ENST00000552862 FAM135AQ9P2D6 1515 aa19.71■□□□□ 0.75
CDK4-214ENST00000552862 NCOA1Q15788 1441 aa19.68■□□□□ 0.74
CDK4-214ENST00000552862 WASHC2CQ9Y4E1 1318 aa19.68■□□□□ 0.74
CDK4-214ENST00000552862 ADGBQ8N7X0 1667 aa19.68■□□□□ 0.74
CDK4-214ENST00000552862 KIF3BO15066 747 aa19.67■□□□□ 0.74
CDK4-214ENST00000552862 PLA2R1Q13018 1463 aa19.67■□□□□ 0.74
CDK4-214ENST00000552862 THEMISQ8N1K5 641 aaPredicted RBP19.66■□□□□ 0.74
CDK4-214ENST00000552862 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
CDK4-214ENST00000552862 MBD5Q9P267 1494 aa19.66■□□□□ 0.74
CDK4-214ENST00000552862 INO80Q9ULG1 1556 aaPredicted RBP19.66■□□□□ 0.74
CDK4-214ENST00000552862 PLXNC1O60486 1568 aa19.65■□□□□ 0.74
CDK4-214ENST00000552862 ZNF644Q9H582 1327 aaPredicted RBP19.64■□□□□ 0.73
CDK4-214ENST00000552862 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
CDK4-214ENST00000552862 STRCQ7RTU9 1775 aa19.62■□□□□ 0.73
CDK4-214ENST00000552862 NCOA2Q15596 1464 aa19.62■□□□□ 0.73
CDK4-214ENST00000552862 PTPRKQ15262 1439 aa19.62■□□□□ 0.73
CDK4-214ENST00000552862 ANKLE2Q86XL3 938 aa19.61■□□□□ 0.73
CDK4-214ENST00000552862 TIAM1Q13009 1591 aa19.61■□□□□ 0.73
CDK4-214ENST00000552862 CAMSAP1Q5T5Y3 1602 aa19.6■□□□□ 0.73
CDK4-214ENST00000552862 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
CDK4-214ENST00000552862 VPS8Q8N3P4 1428 aa19.59■□□□□ 0.73
CDK4-214ENST00000552862 MIA2Q96PC5 1412 aa19.58■□□□□ 0.72
CDK4-214ENST00000552862 A2ML1A8K2U0 1454 aa19.57■□□□□ 0.72
CDK4-214ENST00000552862 TNRQ92752 1358 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms