RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PLCG2P16885 1265 aa8.27□□□□□ -1.09
LSM3P2-201ENST00000551246 KDM2AQ9Y2K7 1162 aa8.26□□□□□ -1.09
LSM3P2-201ENST00000551246 MICALL2Q8IY33 904 aa8.25□□□□□ -1.09
LSM3P2-201ENST00000551246 TMEM121BQ9BXQ6 578 aaPredicted RBP8.25□□□□□ -1.09
LSM3P2-201ENST00000551246 SEC24BO95487 1268 aa8.24□□□□□ -1.09
LSM3P2-201ENST00000551246 VSIG10Q8N0Z9 540 aa8.23□□□□□ -1.09
LSM3P2-201ENST00000551246 BCL11AQ9H165 835 aa8.23□□□□□ -1.09
LSM3P2-201ENST00000551246 BOLA1Q9Y3E2 137 aa8.22□□□□□ -1.09
LSM3P2-201ENST00000551246 GTF3C3Q9Y5Q9 886 aa8.22□□□□□ -1.09
LSM3P2-201ENST00000551246 POTEB2H3BUK9 544 aa8.2□□□□□ -1.1
LSM3P2-201ENST00000551246 NCKAP5LQ9HCH0 1330 aa8.2□□□□□ -1.1
LSM3P2-201ENST00000551246 CENPBP07199 599 aaPredicted RBP8.19□□□□□ -1.1
LSM3P2-201ENST00000551246 POTEJP0CG39 1038 aa8.19□□□□□ -1.1
LSM3P2-201ENST00000551246 CRISPLD2Q9H0B8 497 aa8.19□□□□□ -1.1
LSM3P2-201ENST00000551246 FAM9AQ8IZU1 332 aaPredicted RBP8.18□□□□□ -1.1
LSM3P2-201ENST00000551246 L3MBTL3Q96JM7 780 aaPredicted RBP8.18□□□□□ -1.1
LSM3P2-201ENST00000551246 PRKCSHP14314 528 aaPredicted RBP8.17□□□□□ -1.1
LSM3P2-201ENST00000551246 TMEM92Q6UXU6 159 aa8.16□□□□□ -1.1
LSM3P2-201ENST00000551246 KIF3CO14782 793 aa8.15□□□□□ -1.1
LSM3P2-201ENST00000551246 MFSD10Q14728 455 aa8.14□□□□□ -1.11
LSM3P2-201ENST00000551246 G3V3G9 751 aa8.12□□□□□ -1.11
LSM3P2-201ENST00000551246 GPHNQ9NQX3 736 aaPredicted RBP8.11□□□□□ -1.11
LSM3P2-201ENST00000551246 C2orf72A6NCS6 295 aa8.1□□□□□ -1.11
LSM3P2-201ENST00000551246 SUPT5HO00267 1087 aaKnown RBP8.1□□□□□ -1.11
LSM3P2-201ENST00000551246 PDE4AP27815 886 aa8.1□□□□□ -1.11
LSM3P2-201ENST00000551246 C3orf67Q6ZVT6 689 aa8.09□□□□□ -1.11
LSM3P2-201ENST00000551246 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
LSM3P2-201ENST00000551246 ANP32EQ9BTT0 268 aa8.09□□□□□ -1.11
LSM3P2-201ENST00000551246 DSG2Q14126 1118 aa8.08□□□□□ -1.12
LSM3P2-201ENST00000551246 DDX27Q96GQ7 796 aaKnown RBP8.08□□□□□ -1.12
LSM3P2-201ENST00000551246 FOXK1P85037 733 aa8.07□□□□□ -1.12
LSM3P2-201ENST00000551246 PPP1R15BQ5SWA1 713 aa8.06□□□□□ -1.12
LSM3P2-201ENST00000551246 TMC2Q8TDI7 906 aa8.06□□□□□ -1.12
LSM3P2-201ENST00000551246 CAMK2BQ13554 666 aa8.05□□□□□ -1.12
LSM3P2-201ENST00000551246 KCNV2Q8TDN2 545 aa8.05□□□□□ -1.12
LSM3P2-201ENST00000551246 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.05□□□□□ -1.12
LSM3P2-201ENST00000551246 WDR70Q9NW82 654 aa8.04□□□□□ -1.12
LSM3P2-201ENST00000551246 LOC105371045A0A1W2PR82 267 aa8.03□□□□□ -1.12
LSM3P2-201ENST00000551246 E2F4Q16254 413 aa8.02□□□□□ -1.13
LSM3P2-201ENST00000551246 LHX8Q68G74 356 aa8.02□□□□□ -1.13
LSM3P2-201ENST00000551246 ERICH6Q7L0X2 663 aa8.02□□□□□ -1.13
LSM3P2-201ENST00000551246 PLPP6Q8IY26 295 aa8.02□□□□□ -1.13
LSM3P2-201ENST00000551246 OTUD5Q96G74 571 aa8.02□□□□□ -1.13
LSM3P2-201ENST00000551246 MAMSTRQ6ZN01 415 aa8.01□□□□□ -1.13
LSM3P2-201ENST00000551246 SCUBE2Q9NQ36 999 aa8.01□□□□□ -1.13
LSM3P2-201ENST00000551246 CLSPNQ9HAW4 1339 aa8.01□□□□□ -1.13
LSM3P2-201ENST00000551246 P3H3Q8IVL6 736 aa8□□□□□ -1.13
LSM3P2-201ENST00000551246 EMILIN3Q9NT22 766 aa8□□□□□ -1.13
LSM3P2-201ENST00000551246 ARIH1Q9Y4X5 557 aaPredicted RBP8□□□□□ -1.13
LSM3P2-201ENST00000551246 DIEXFQ68CQ4 756 aaKnown RBP7.99□□□□□ -1.13
LSM3P2-201ENST00000551246 SHROOM4Q9ULL8 1493 aa7.99□□□□□ -1.13
LSM3P2-201ENST00000551246 SLAIN1Q8ND83 568 aa7.98□□□□□ -1.13
LSM3P2-201ENST00000551246 SLC34A2O95436 690 aa7.95□□□□□ -1.14
LSM3P2-201ENST00000551246 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
LSM3P2-201ENST00000551246 OXER1Q8TDS5 423 aa7.95□□□□□ -1.14
LSM3P2-201ENST00000551246 ARHGEF1Q92888 912 aaKnown RBP7.95□□□□□ -1.14
LSM3P2-201ENST00000551246 ZCCHC6Q5VYS8 1495 aaKnown RBP7.93□□□□□ -1.14
LSM3P2-201ENST00000551246 DPYSL4O14531 572 aa7.92□□□□□ -1.14
LSM3P2-201ENST00000551246 PTCD2Q8WV60 388 aaKnown RBP7.92□□□□□ -1.14
LSM3P2-201ENST00000551246 UPF1Q92900 1129 aaKnown RBP eCLIP7.91□□□□□ -1.14
LSM3P2-201ENST00000551246 PDIA6Q15084 440 aa7.9□□□□□ -1.14
LSM3P2-201ENST00000551246 BCANQ96GW7 911 aa7.9□□□□□ -1.14
LSM3P2-201ENST00000551246 KDM4FA0A1W2PPD8 638 aa7.87□□□□□ -1.15
LSM3P2-201ENST00000551246 DOK7Q18PE1 504 aa7.87□□□□□ -1.15
LSM3P2-201ENST00000551246 PCDHGA4Q9Y5G9 962 aa7.87□□□□□ -1.15
LSM3P2-201ENST00000551246 SEMA3EO15041 775 aa7.86□□□□□ -1.15
LSM3P2-201ENST00000551246 NBR1Q14596 966 aa7.86□□□□□ -1.15
LSM3P2-201ENST00000551246 TESPA1A2RU30 521 aaPredicted RBP7.85□□□□□ -1.15
LSM3P2-201ENST00000551246 ZNF316A6NFI3 1004 aaPredicted RBP7.85□□□□□ -1.15
LSM3P2-201ENST00000551246 SPDYE16A6NNV3 312 aaPredicted RBP7.85□□□□□ -1.15
LSM3P2-201ENST00000551246 MAP3K9P80192 1104 aa7.85□□□□□ -1.15
LSM3P2-201ENST00000551246 GPR153Q6NV75 609 aa7.85□□□□□ -1.15
LSM3P2-201ENST00000551246 ZSWIM6Q9HCJ5 1215 aa7.84□□□□□ -1.15
LSM3P2-201ENST00000551246 SUPT16HQ9Y5B9 1047 aaKnown RBP7.84□□□□□ -1.15
LSM3P2-201ENST00000551246 EVI5O60447 810 aa7.83□□□□□ -1.16
LSM3P2-201ENST00000551246 KHSRPQ92945 711 aaKnown RBP eCLIP7.83□□□□□ -1.16
LSM3P2-201ENST00000551246 ANO8Q9HCE9 1232 aaPredicted RBP7.83□□□□□ -1.16
LSM3P2-201ENST00000551246 SNPHO15079 494 aa7.82□□□□□ -1.16
LSM3P2-201ENST00000551246 MLLT3P42568 568 aaPredicted RBP7.82□□□□□ -1.16
LSM3P2-201ENST00000551246 ARSIQ5FYB1 569 aa7.82□□□□□ -1.16
LSM3P2-201ENST00000551246 RIMBP2O15034 1052 aa7.81□□□□□ -1.16
LSM3P2-201ENST00000551246 TBC1D12O60347 775 aa7.81□□□□□ -1.16
LSM3P2-201ENST00000551246 PTGER2P43116 358 aa7.81□□□□□ -1.16
LSM3P2-201ENST00000551246 NUDT7P0C024 238 aa7.79□□□□□ -1.16
LSM3P2-201ENST00000551246 HOXB1P14653 301 aaPredicted RBP7.79□□□□□ -1.16
LSM3P2-201ENST00000551246 LCE2DQ5TA82 110 aaPredicted RBP7.79□□□□□ -1.16
LSM3P2-201ENST00000551246 ZNF710Q8N1W2 664 aa7.79□□□□□ -1.16
LSM3P2-201ENST00000551246 ST18O60284 1047 aa7.77□□□□□ -1.17
LSM3P2-201ENST00000551246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.76□□□□□ -1.17
LSM3P2-201ENST00000551246 CCER1Q8TC90 406 aaPredicted RBP7.76□□□□□ -1.17
LSM3P2-201ENST00000551246 PRIM1P49642 420 aaKnown RBP7.75□□□□□ -1.17
LSM3P2-201ENST00000551246 DDX12PQ92771 950 aa7.75□□□□□ -1.17
LSM3P2-201ENST00000551246 OSBPP22059 807 aa7.74□□□□□ -1.17
LSM3P2-201ENST00000551246 FOSBP53539 338 aa7.74□□□□□ -1.17
LSM3P2-201ENST00000551246 JPH4Q96JJ6 628 aa7.74□□□□□ -1.17
LSM3P2-201ENST00000551246 LHX6Q9UPM6 363 aa7.74□□□□□ -1.17
LSM3P2-201ENST00000551246 PCDHGA10Q9Y5H3 936 aa7.74□□□□□ -1.17
LSM3P2-201ENST00000551246 WRNQ14191 1432 aaPredicted RBP eCLIP7.73□□□□□ -1.17
LSM3P2-201ENST00000551246 PHF14O94880 888 aa7.73□□□□□ -1.17
LSM3P2-201ENST00000551246 LMOD2Q6P5Q4 547 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms