RNA–Protein interactions for RNA: ENST00000550963.1

ZFC3H1-209, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 5

Gene ZFC3H1, Length 845 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-209ENST00000550963 C2orf72A6NCS6 295 aa14.32□□□□□ -0.12
ZFC3H1-209ENST00000550963 DOK7Q18PE1 504 aa14.31□□□□□ -0.12
ZFC3H1-209ENST00000550963 KIF3CO14782 793 aa14.3□□□□□ -0.12
ZFC3H1-209ENST00000550963 PAXIP1Q6ZW49 1069 aaPredicted RBP14.28□□□□□ -0.12
ZFC3H1-209ENST00000550963 RIMBP2O15034 1052 aa14.27□□□□□ -0.13
ZFC3H1-209ENST00000550963 ST18O60284 1047 aa14.27□□□□□ -0.13
ZFC3H1-209ENST00000550963 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.13
ZFC3H1-209ENST00000550963 CFAP44Q96MT7 982 aa14.27□□□□□ -0.13
ZFC3H1-209ENST00000550963 HOXB3P14651 431 aaPredicted RBP14.25□□□□□ -0.13
ZFC3H1-209ENST00000550963 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
ZFC3H1-209ENST00000550963 LCE2DQ5TA82 110 aaPredicted RBP14.23□□□□□ -0.13
ZFC3H1-209ENST00000550963 PDE4AP27815 886 aa14.21□□□□□ -0.13
ZFC3H1-209ENST00000550963 FOXK1P85037 733 aa14.19□□□□□ -0.14
ZFC3H1-209ENST00000550963 CRISPLD2Q9H0B8 497 aa14.19□□□□□ -0.14
ZFC3H1-209ENST00000550963 ZSWIM6Q9HCJ5 1215 aa14.19□□□□□ -0.14
ZFC3H1-209ENST00000550963 POTEMA6NI47 508 aa14.18□□□□□ -0.14
ZFC3H1-209ENST00000550963 POTEGQ6S5H5 508 aa14.17□□□□□ -0.14
ZFC3H1-209ENST00000550963 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.14
ZFC3H1-209ENST00000550963 DSG2Q14126 1118 aa14.15□□□□□ -0.14
ZFC3H1-209ENST00000550963 PLPP6Q8IY26 295 aa14.15□□□□□ -0.14
ZFC3H1-209ENST00000550963 HOXB1P14653 301 aaPredicted RBP14.13□□□□□ -0.15
ZFC3H1-209ENST00000550963 LARP6Q9BRS8 491 aaKnown RBP14.13□□□□□ -0.15
ZFC3H1-209ENST00000550963 SLC34A2O95436 690 aa14.12□□□□□ -0.15
ZFC3H1-209ENST00000550963 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
ZFC3H1-209ENST00000550963 EMP3P54852 163 aa14.11□□□□□ -0.15
ZFC3H1-209ENST00000550963 PPP1R15BQ5SWA1 713 aa14.11□□□□□ -0.15
ZFC3H1-209ENST00000550963 MARVELD3Q96A59 401 aa14.11□□□□□ -0.15
ZFC3H1-209ENST00000550963 DDX27Q96GQ7 796 aaKnown RBP14.11□□□□□ -0.15
ZFC3H1-209ENST00000550963 GPR153Q6NV75 609 aa14.07□□□□□ -0.16
ZFC3H1-209ENST00000550963 ARSIQ5FYB1 569 aa14.06□□□□□ -0.16
ZFC3H1-209ENST00000550963 MFSD10Q14728 455 aa14.05□□□□□ -0.16
ZFC3H1-209ENST00000550963 PCDHGA4Q9Y5G9 962 aa14.04□□□□□ -0.16
ZFC3H1-209ENST00000550963 TBC1D12O60347 775 aa14.03□□□□□ -0.16
ZFC3H1-209ENST00000550963 PTCD2Q8WV60 388 aaKnown RBP14.02□□□□□ -0.17
ZFC3H1-209ENST00000550963 PLCB2Q00722 1185 aa14.01□□□□□ -0.17
ZFC3H1-209ENST00000550963 PCDH10Q9P2E7 1040 aa14□□□□□ -0.17
ZFC3H1-209ENST00000550963 ERBB3P21860 1342 aa13.99□□□□□ -0.17
ZFC3H1-209ENST00000550963 FAM205CA6NFA0 338 aa13.99□□□□□ -0.17
ZFC3H1-209ENST00000550963 KHSRPQ92945 711 aaKnown RBP eCLIP13.97□□□□□ -0.172e-6■□□□□ 10.1
ZFC3H1-209ENST00000550963 NUDT7P0C024 238 aa13.96□□□□□ -0.17
ZFC3H1-209ENST00000550963 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
ZFC3H1-209ENST00000550963 UPF1Q92900 1129 aaKnown RBP eCLIP13.95□□□□□ -0.18
ZFC3H1-209ENST00000550963 HS3ST6Q96QI5 342 aa13.95□□□□□ -0.18
ZFC3H1-209ENST00000550963 WDR70Q9NW82 654 aa13.95□□□□□ -0.18
ZFC3H1-209ENST00000550963 TSHZ2Q9NRE2 1034 aa13.94□□□□□ -0.18
ZFC3H1-209ENST00000550963 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
ZFC3H1-209ENST00000550963 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
ZFC3H1-209ENST00000550963 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
ZFC3H1-209ENST00000550963 MAP3K9P80192 1104 aa13.88□□□□□ -0.19
ZFC3H1-209ENST00000550963 CAMK2BQ13554 666 aa13.87□□□□□ -0.19
ZFC3H1-209ENST00000550963 EMILIN3Q9NT22 766 aa13.86□□□□□ -0.19
ZFC3H1-209ENST00000550963 LHX6Q9UPM6 363 aa13.86□□□□□ -0.19
ZFC3H1-209ENST00000550963 POTEB3A0JP26 581 aa13.85□□□□□ -0.19
ZFC3H1-209ENST00000550963 PSDA5PKW4 1024 aaPredicted RBP13.85□□□□□ -0.19
ZFC3H1-209ENST00000550963 POTEBQ6S5H4 581 aa13.85□□□□□ -0.19
ZFC3H1-209ENST00000550963 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
ZFC3H1-209ENST00000550963 E2F4Q16254 413 aa13.83□□□□□ -0.2
ZFC3H1-209ENST00000550963 EVI5O60447 810 aa13.81□□□□□ -0.2
ZFC3H1-209ENST00000550963 HAP1P54257 671 aaPredicted RBP13.8□□□□□ -0.2
ZFC3H1-209ENST00000550963 ZNF687Q8N1G0 1237 aa13.8□□□□□ -0.2
ZFC3H1-209ENST00000550963 DPYSL4O14531 572 aa13.77□□□□□ -0.21
ZFC3H1-209ENST00000550963 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
ZFC3H1-209ENST00000550963 PPP4R3BQ5MIZ7 849 aa13.75□□□□□ -0.21
ZFC3H1-209ENST00000550963 PBX2P40425 430 aa13.71□□□□□ -0.21
ZFC3H1-209ENST00000550963 ZNF454Q8N9F8 522 aa13.71□□□□□ -0.21
ZFC3H1-209ENST00000550963 ARIH1Q9Y4X5 557 aaPredicted RBP13.7□□□□□ -0.22
ZFC3H1-209ENST00000550963 KRTAP3-3Q9BYR6 98 aa13.69□□□□□ -0.22
ZFC3H1-209ENST00000550963 KRTAP3-2Q9BYR7 98 aa13.69□□□□□ -0.22
ZFC3H1-209ENST00000550963 JPH4Q96JJ6 628 aa13.68□□□□□ -0.22
ZFC3H1-209ENST00000550963 SPDYE16A6NNV3 312 aaPredicted RBP13.67□□□□□ -0.22
ZFC3H1-209ENST00000550963 FOSBP53539 338 aa13.67□□□□□ -0.22
ZFC3H1-209ENST00000550963 PDIA6Q15084 440 aa13.66□□□□□ -0.22
ZFC3H1-209ENST00000550963 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
ZFC3H1-209ENST00000550963 KCNH8Q96L42 1107 aa13.65□□□□□ -0.22
ZFC3H1-209ENST00000550963 ARHGAP33O14559 1287 aa13.63□□□□□ -0.23
ZFC3H1-209ENST00000550963 PHF14O94880 888 aa13.62□□□□□ -0.23
ZFC3H1-209ENST00000550963 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
ZFC3H1-209ENST00000550963 ZDHHC16Q969W1 377 aa13.62□□□□□ -0.23
ZFC3H1-209ENST00000550963 PTGER2P43116 358 aa13.61□□□□□ -0.23
ZFC3H1-209ENST00000550963 KCNV2Q8TDN2 545 aa13.6□□□□□ -0.23
ZFC3H1-209ENST00000550963 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
ZFC3H1-209ENST00000550963 AXIN2Q9Y2T1 843 aa13.6□□□□□ -0.23
ZFC3H1-209ENST00000550963 LSM11P83369 360 aaKnown RBP eCLIP13.59□□□□□ -0.23
ZFC3H1-209ENST00000550963 FBXW7Q969H0 707 aa13.59□□□□□ -0.23
ZFC3H1-209ENST00000550963 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
ZFC3H1-209ENST00000550963 PCDHGA10Q9Y5H3 936 aa13.59□□□□□ -0.23
ZFC3H1-209ENST00000550963 TYW1BQ6NUM6 668 aa13.58□□□□□ -0.24
ZFC3H1-209ENST00000550963 POTEEQ6S8J3 1075 aa13.58□□□□□ -0.24
ZFC3H1-209ENST00000550963 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
ZFC3H1-209ENST00000550963 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
ZFC3H1-209ENST00000550963 EPAS1Q99814 870 aa13.58□□□□□ -0.24
ZFC3H1-209ENST00000550963 DDX12PQ92771 950 aa13.57□□□□□ -0.24
ZFC3H1-209ENST00000550963 KCNK17Q96T54 332 aa13.57□□□□□ -0.24
ZFC3H1-209ENST00000550963 PTPREP23469 700 aa13.56□□□□□ -0.24
ZFC3H1-209ENST00000550963 SPNS2Q8IVW8 549 aa13.56□□□□□ -0.24
ZFC3H1-209ENST00000550963 PSEN2P49810 448 aa13.54□□□□□ -0.24
ZFC3H1-209ENST00000550963 ADAM33Q9BZ11 813 aa13.54□□□□□ -0.24
ZFC3H1-209ENST00000550963 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
ZFC3H1-209ENST00000550963 NBR1Q14596 966 aa13.51□□□□□ -0.25
ZFC3H1-209ENST00000550963 GRXCR2A6NFK2 248 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms