RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 PDE4AP27815 886 aa12.09□□□□□ -0.47
GNPTAB-207ENST00000550352 C3orf67Q6ZVT6 689 aa12.09□□□□□ -0.47
GNPTAB-207ENST00000550352 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
GNPTAB-207ENST00000550352 TMEM92Q6UXU6 159 aa12.07□□□□□ -0.48
GNPTAB-207ENST00000550352 TMC2Q8TDI7 906 aa12.05□□□□□ -0.48
GNPTAB-207ENST00000550352 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
GNPTAB-207ENST00000550352 WDR70Q9NW82 654 aa12.05□□□□□ -0.48
GNPTAB-207ENST00000550352 C2orf72A6NCS6 295 aa12.04□□□□□ -0.48
GNPTAB-207ENST00000550352 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
GNPTAB-207ENST00000550352 KIF3CO14782 793 aa12.02□□□□□ -0.49
GNPTAB-207ENST00000550352 MFSD10Q14728 455 aa12.02□□□□□ -0.49
GNPTAB-207ENST00000550352 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
GNPTAB-207ENST00000550352 DSG2Q14126 1118 aa12□□□□□ -0.49
GNPTAB-207ENST00000550352 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
GNPTAB-207ENST00000550352 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
GNPTAB-207ENST00000550352 FOXK1P85037 733 aa11.97□□□□□ -0.49
GNPTAB-207ENST00000550352 LHX8Q68G74 356 aa11.97□□□□□ -0.49
GNPTAB-207ENST00000550352 MAMSTRQ6ZN01 415 aa11.97□□□□□ -0.49
GNPTAB-207ENST00000550352 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
GNPTAB-207ENST00000550352 E2F4Q16254 413 aa11.93□□□□□ -0.5
GNPTAB-207ENST00000550352 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
GNPTAB-207ENST00000550352 KCNV2Q8TDN2 545 aa11.92□□□□□ -0.5
GNPTAB-207ENST00000550352 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
GNPTAB-207ENST00000550352 CAMK2BQ13554 666 aa11.89□□□□□ -0.51
GNPTAB-207ENST00000550352 P3H3Q8IVL6 736 aa11.88□□□□□ -0.51
GNPTAB-207ENST00000550352 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
GNPTAB-207ENST00000550352 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
GNPTAB-207ENST00000550352 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
GNPTAB-207ENST00000550352 DPYSL4O14531 572 aa11.78□□□□□ -0.52
GNPTAB-207ENST00000550352 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
GNPTAB-207ENST00000550352 SLC34A2O95436 690 aa11.77□□□□□ -0.53
GNPTAB-207ENST00000550352 HOXB3P14651 431 aaPredicted RBP11.77□□□□□ -0.53
GNPTAB-207ENST00000550352 OXER1Q8TDS5 423 aa11.77□□□□□ -0.53
GNPTAB-207ENST00000550352 PTCD2Q8WV60 388 aaKnown RBP11.75□□□□□ -0.53
GNPTAB-207ENST00000550352 BCANQ96GW7 911 aa11.75□□□□□ -0.53
GNPTAB-207ENST00000550352 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
GNPTAB-207ENST00000550352 NBR1Q14596 966 aa11.74□□□□□ -0.53
GNPTAB-207ENST00000550352 DOK7Q18PE1 504 aa11.74□□□□□ -0.53
GNPTAB-207ENST00000550352 PCDHGA4Q9Y5G9 962 aa11.72□□□□□ -0.53
GNPTAB-207ENST00000550352 SNPHO15079 494 aa11.7□□□□□ -0.54
GNPTAB-207ENST00000550352 TBC1D12O60347 775 aa11.7□□□□□ -0.54
GNPTAB-207ENST00000550352 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
GNPTAB-207ENST00000550352 SEMA3EO15041 775 aa11.68□□□□□ -0.54
GNPTAB-207ENST00000550352 PDIA6Q15084 440 aa11.68□□□□□ -0.54
GNPTAB-207ENST00000550352 RIMBP2O15034 1052 aa11.67□□□□□ -0.54
GNPTAB-207ENST00000550352 ARSIQ5FYB1 569 aa11.67□□□□□ -0.54
GNPTAB-207ENST00000550352 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.548e-25■■■■■ 39.8
GNPTAB-207ENST00000550352 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
GNPTAB-207ENST00000550352 EVI5O60447 810 aa11.66□□□□□ -0.54
GNPTAB-207ENST00000550352 GPR153Q6NV75 609 aa11.65□□□□□ -0.54
GNPTAB-207ENST00000550352 ZSWIM6Q9HCJ5 1215 aa11.65□□□□□ -0.54
GNPTAB-207ENST00000550352 NUDT7P0C024 238 aa11.62□□□□□ -0.55
GNPTAB-207ENST00000550352 KDM4FA0A1W2PPD8 638 aa11.61□□□□□ -0.55
GNPTAB-207ENST00000550352 TESPA1A2RU30 521 aaPredicted RBP11.61□□□□□ -0.55
GNPTAB-207ENST00000550352 MLLT3P42568 568 aaPredicted RBP11.61□□□□□ -0.55
GNPTAB-207ENST00000550352 ANO8Q9HCE9 1232 aaPredicted RBP11.6□□□□□ -0.55
GNPTAB-207ENST00000550352 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
GNPTAB-207ENST00000550352 HOXB1P14653 301 aaPredicted RBP11.58□□□□□ -0.56
GNPTAB-207ENST00000550352 ST18O60284 1047 aa11.57□□□□□ -0.56
GNPTAB-207ENST00000550352 DDX12PQ92771 950 aa11.57□□□□□ -0.56
GNPTAB-207ENST00000550352 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
GNPTAB-207ENST00000550352 GRXCR2A6NFK2 248 aa11.56□□□□□ -0.56
GNPTAB-207ENST00000550352 PTGER2P43116 358 aa11.56□□□□□ -0.56
GNPTAB-207ENST00000550352 LHX6Q9UPM6 363 aa11.53□□□□□ -0.56
GNPTAB-207ENST00000550352 SMYD5Q6GMV2 418 aa11.51□□□□□ -0.57
GNPTAB-207ENST00000550352 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
GNPTAB-207ENST00000550352 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
GNPTAB-207ENST00000550352 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
GNPTAB-207ENST00000550352 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
GNPTAB-207ENST00000550352 PCDHGA10Q9Y5H3 936 aa11.49□□□□□ -0.57
GNPTAB-207ENST00000550352 PHF14O94880 888 aa11.48□□□□□ -0.57
GNPTAB-207ENST00000550352 OSBPP22059 807 aa11.48□□□□□ -0.57
GNPTAB-207ENST00000550352 RBM26Q5T8P6 1007 aaKnown RBP11.48□□□□□ -0.57
GNPTAB-207ENST00000550352 ZNF454Q8N9F8 522 aa11.48□□□□□ -0.57
GNPTAB-207ENST00000550352 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
GNPTAB-207ENST00000550352 PRIM1P49642 420 aaKnown RBP11.47□□□□□ -0.57
GNPTAB-207ENST00000550352 FOSBP53539 338 aa11.47□□□□□ -0.57
GNPTAB-207ENST00000550352 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
GNPTAB-207ENST00000550352 EMP3P54852 163 aa11.46□□□□□ -0.57
GNPTAB-207ENST00000550352 EPAS1Q99814 870 aa11.45□□□□□ -0.58
GNPTAB-207ENST00000550352 TYW1BQ6NUM6 668 aa11.44□□□□□ -0.58
GNPTAB-207ENST00000550352 ERBB3P21860 1342 aa11.43□□□□□ -0.58
GNPTAB-207ENST00000550352 RBM33Q96EV2 1170 aaKnown RBP11.43□□□□□ -0.58
GNPTAB-207ENST00000550352 ZDHHC16Q969W1 377 aa11.42□□□□□ -0.58
GNPTAB-207ENST00000550352 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
GNPTAB-207ENST00000550352 PPP4R3BQ5MIZ7 849 aa11.41□□□□□ -0.58
GNPTAB-207ENST00000550352 VARS2Q5ST30 1063 aaKnown RBP11.41□□□□□ -0.58
GNPTAB-207ENST00000550352 FBXW7Q969H0 707 aa11.41□□□□□ -0.58
GNPTAB-207ENST00000550352 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
GNPTAB-207ENST00000550352 EN1Q05925 392 aaPredicted RBP11.4□□□□□ -0.58
GNPTAB-207ENST00000550352 ADAM33Q9BZ11 813 aa11.39□□□□□ -0.59
GNPTAB-207ENST00000550352 MAP3K7O43318 606 aa11.38□□□□□ -0.59
GNPTAB-207ENST00000550352 NUTM2FA1L443 756 aa11.37□□□□□ -0.59
GNPTAB-207ENST00000550352 TSR1Q2NL82 804 aaKnown RBP11.37□□□□□ -0.59
GNPTAB-207ENST00000550352 POTEB3A0JP26 581 aa11.36□□□□□ -0.59
GNPTAB-207ENST00000550352 POTEBQ6S5H4 581 aa11.36□□□□□ -0.59
GNPTAB-207ENST00000550352 GPIHBP1Q8IV16 184 aa11.36□□□□□ -0.59
GNPTAB-207ENST00000550352 CDHR5Q9HBB8 845 aa11.36□□□□□ -0.59
GNPTAB-207ENST00000550352 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
GNPTAB-207ENST00000550352 C6orf132Q5T0Z8 1188 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms