RNA–Protein interactions for RNA: ENST00000549993.1

AC138331.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC138331.1, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138331.1-201ENST00000549993 SIGLEC1Q9BZZ2 1709 aa16.22■□□□□ 0.19
AC138331.1-201ENST00000549993 ATP10AO60312 1499 aa16.22■□□□□ 0.19
AC138331.1-201ENST00000549993 LTBP4Q8N2S1 1624 aa16.21■□□□□ 0.19
AC138331.1-201ENST00000549993 STRCQ7RTU9 1775 aa16.21■□□□□ 0.18
AC138331.1-201ENST00000549993 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
AC138331.1-201ENST00000549993 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
AC138331.1-201ENST00000549993 HECW1Q76N89 1606 aa16.17■□□□□ 0.18
AC138331.1-201ENST00000549993 RAPGEF6Q8TEU7 1601 aa16.17■□□□□ 0.18
AC138331.1-201ENST00000549993 PREX1Q8TCU6 1659 aa16.17■□□□□ 0.18
AC138331.1-201ENST00000549993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.16■□□□□ 0.18
AC138331.1-201ENST00000549993 PLCH2O75038 1416 aa16.15■□□□□ 0.18
AC138331.1-201ENST00000549993 UBAP1LF5GYI3 381 aa16.14■□□□□ 0.17
AC138331.1-201ENST00000549993 CFAP74Q9C0B2 1584 aa16.13■□□□□ 0.17
AC138331.1-201ENST00000549993 FER1L4A9Z1Z3 1794 aa16.13■□□□□ 0.17
AC138331.1-201ENST00000549993 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
AC138331.1-201ENST00000549993 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
AC138331.1-201ENST00000549993 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
AC138331.1-201ENST00000549993 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
AC138331.1-201ENST00000549993 AFAP1Q8N556 730 aa16.09■□□□□ 0.17
AC138331.1-201ENST00000549993 SETD1BQ9UPS6 1966 aaKnown RBP16.09■□□□□ 0.17
AC138331.1-201ENST00000549993 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
AC138331.1-201ENST00000549993 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
AC138331.1-201ENST00000549993 ESF1Q9H501 851 aaKnown RBP16.04■□□□□ 0.16
AC138331.1-201ENST00000549993 NCKAP5LQ9HCH0 1330 aa16.03■□□□□ 0.16
AC138331.1-201ENST00000549993 ZNF518AQ6AHZ1 1483 aa16.03■□□□□ 0.16
AC138331.1-201ENST00000549993 HSPA1LP34931 641 aa16.02■□□□□ 0.16
AC138331.1-201ENST00000549993 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
AC138331.1-201ENST00000549993 PKD2Q13563 968 aa16■□□□□ 0.15
AC138331.1-201ENST00000549993 CNTLNQ9NXG0 1405 aa15.98■□□□□ 0.15
AC138331.1-201ENST00000549993 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
AC138331.1-201ENST00000549993 REREQ9P2R6 1566 aa15.97■□□□□ 0.15
AC138331.1-201ENST00000549993 NPATQ14207 1427 aa15.97■□□□□ 0.15
AC138331.1-201ENST00000549993 AGLP35573 1532 aa15.97■□□□□ 0.15
AC138331.1-201ENST00000549993 MLH3Q9UHC1 1453 aa15.97■□□□□ 0.15
AC138331.1-201ENST00000549993 KDM5CP41229 1560 aa15.96■□□□□ 0.15
AC138331.1-201ENST00000549993 CAMSAP1Q5T5Y3 1602 aa15.95■□□□□ 0.14
AC138331.1-201ENST00000549993 CDK11AQ9UQ88 783 aaPredicted RBP15.94■□□□□ 0.14
AC138331.1-201ENST00000549993 ZMYM3Q14202 1370 aa15.94■□□□□ 0.14
AC138331.1-201ENST00000549993 CDK13Q14004 1512 aaKnown RBP15.94■□□□□ 0.14
AC138331.1-201ENST00000549993 C3P01024 1663 aa15.93■□□□□ 0.14
AC138331.1-201ENST00000549993 MED1Q15648 1581 aaPredicted RBP15.93■□□□□ 0.14
AC138331.1-201ENST00000549993 DIP2CQ9Y2E4 1556 aa15.93■□□□□ 0.14
AC138331.1-201ENST00000549993 TOM1O60784 492 aa15.93■□□□□ 0.14
AC138331.1-201ENST00000549993 PIP4K2BP78356 416 aa15.92■□□□□ 0.14
AC138331.1-201ENST00000549993 PLA2R1Q13018 1463 aa15.91■□□□□ 0.14
AC138331.1-201ENST00000549993 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
AC138331.1-201ENST00000549993 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
AC138331.1-201ENST00000549993 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
AC138331.1-201ENST00000549993 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
AC138331.1-201ENST00000549993 ARHGAP5Q13017 1502 aa15.86■□□□□ 0.13
AC138331.1-201ENST00000549993 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
AC138331.1-201ENST00000549993 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
AC138331.1-201ENST00000549993 TROQ12816 1431 aaPredicted RBP15.85■□□□□ 0.13
AC138331.1-201ENST00000549993 PTPRKQ15262 1439 aa15.83■□□□□ 0.12
AC138331.1-201ENST00000549993 RGS17Q9UGC6 210 aaPredicted RBP15.8■□□□□ 0.12
AC138331.1-201ENST00000549993 MYO5CQ9NQX4 1742 aa15.8■□□□□ 0.12
AC138331.1-201ENST00000549993 FMN1Q68DA7 1419 aa15.79■□□□□ 0.12
AC138331.1-201ENST00000549993 KIF14Q15058 1648 aa15.79■□□□□ 0.12
AC138331.1-201ENST00000549993 CPS1P31327 1500 aa15.78■□□□□ 0.12
AC138331.1-201ENST00000549993 SHANK2Q9UPX8 1470 aa15.78■□□□□ 0.12
AC138331.1-201ENST00000549993 CLIP1P30622 1438 aa15.78■□□□□ 0.12
AC138331.1-201ENST00000549993 EEA1Q15075 1411 aa15.77■□□□□ 0.11
AC138331.1-201ENST00000549993 CEP170BQ9Y4F5 1589 aaPredicted RBP15.76■□□□□ 0.11
AC138331.1-201ENST00000549993 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
AC138331.1-201ENST00000549993 ABCC1P33527 1531 aa15.75■□□□□ 0.11
AC138331.1-201ENST00000549993 MROH2AA6NES4 1674 aa15.75■□□□□ 0.11
AC138331.1-201ENST00000549993 GGT6Q6P531 493 aa15.74■□□□□ 0.11
AC138331.1-201ENST00000549993 A2ML1A8K2U0 1454 aa15.73■□□□□ 0.11
AC138331.1-201ENST00000549993 KIDINS220Q9ULH0 1771 aa15.72■□□□□ 0.11
AC138331.1-201ENST00000549993 ZNF142P52746 1687 aaPredicted RBP15.72■□□□□ 0.11
AC138331.1-201ENST00000549993 ALKQ9UM73 1620 aa15.72■□□□□ 0.11
AC138331.1-201ENST00000549993 ANKLE2Q86XL3 938 aa15.71■□□□□ 0.11
AC138331.1-201ENST00000549993 MYO3AQ8NEV4 1616 aa15.71■□□□□ 0.11
AC138331.1-201ENST00000549993 HNRNPMP52272 730 aaKnown RBP eCLIP15.7■□□□□ 0.1
AC138331.1-201ENST00000549993 SAMD9LQ8IVG5 1584 aa15.69■□□□□ 0.1
AC138331.1-201ENST00000549993 SRCAPQ6ZRS2 3230 aa15.68■□□□□ 0.1
AC138331.1-201ENST00000549993 A2MP01023 1474 aa15.67■□□□□ 0.1
AC138331.1-201ENST00000549993 ARHGAP35Q9NRY4 1499 aa15.67■□□□□ 0.1
AC138331.1-201ENST00000549993 FBXO31Q5XUX0 539 aaPredicted RBP15.67■□□□□ 0.1
AC138331.1-201ENST00000549993 THEMISQ8N1K5 641 aaPredicted RBP15.67■□□□□ 0.1
AC138331.1-201ENST00000549993 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
AC138331.1-201ENST00000549993 CDC42BPBQ9Y5S2 1711 aa15.67■□□□□ 0.1
AC138331.1-201ENST00000549993 DNMT1P26358 1616 aaKnown RBP15.66■□□□□ 0.1
AC138331.1-201ENST00000549993 POTEAQ6S8J7 498 aa15.66■□□□□ 0.1
AC138331.1-201ENST00000549993 NEURL4Q96JN8 1562 aa15.66■□□□□ 0.1
AC138331.1-201ENST00000549993 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
AC138331.1-201ENST00000549993 KIAA1107Q9UPP5 1409 aa15.65■□□□□ 0.1
AC138331.1-201ENST00000549993 VWDEQ8N2E2 1590 aa15.65■□□□□ 0.1
AC138331.1-201ENST00000549993 TNRQ92752 1358 aa15.64■□□□□ 0.09
AC138331.1-201ENST00000549993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.64■□□□□ 0.09
AC138331.1-201ENST00000549993 PLXNC1O60486 1568 aa15.64■□□□□ 0.09
AC138331.1-201ENST00000549993 PREX2Q70Z35 1606 aa15.64■□□□□ 0.09
AC138331.1-201ENST00000549993 MED14O60244 1454 aa15.64■□□□□ 0.09
AC138331.1-201ENST00000549993 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
AC138331.1-201ENST00000549993 UBTFP17480 764 aaKnown RBP15.63■□□□□ 0.09
AC138331.1-201ENST00000549993 NPHP4O75161 1426 aaPredicted RBP15.62■□□□□ 0.09
AC138331.1-201ENST00000549993 CLTCQ00610 1675 aaKnown RBP15.62■□□□□ 0.09
AC138331.1-201ENST00000549993 LRRC7Q96NW7 1537 aa15.61■□□□□ 0.09
AC138331.1-201ENST00000549993 GPATCH8Q9UKJ3 1502 aaKnown RBP15.6■□□□□ 0.09
AC138331.1-201ENST00000549993 ATP7AQ04656 1500 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms