RNA–Protein interactions for RNA: ENST00000549759.1

PFDN5-207, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-207ENST00000549759 GPATCH8Q9UKJ3 1502 aaKnown RBP19.89■□□□□ 0.77
PFDN5-207ENST00000549759 COL17A1Q9UMD9 1497 aaPredicted RBP19.88■□□□□ 0.77
PFDN5-207ENST00000549759 RAPGEF3O95398 923 aa19.88■□□□□ 0.77
PFDN5-207ENST00000549759 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
PFDN5-207ENST00000549759 DENND4BO75064 1496 aaPredicted RBP19.86■□□□□ 0.77
PFDN5-207ENST00000549759 SCAPERQ9BY12 1400 aa19.85■□□□□ 0.77
PFDN5-207ENST00000549759 ADGRL1O94910 1474 aa19.84■□□□□ 0.77
PFDN5-207ENST00000549759 CFAP74Q9C0B2 1584 aa19.83■□□□□ 0.77
PFDN5-207ENST00000549759 MYO5CQ9NQX4 1742 aa19.81■□□□□ 0.76
PFDN5-207ENST00000549759 SUPT6HQ7KZ85 1726 aaKnown RBP19.8■□□□□ 0.76
PFDN5-207ENST00000549759 AFAP1Q8N556 730 aa19.79■□□□□ 0.76
PFDN5-207ENST00000549759 HNRNPMP52272 730 aaKnown RBP eCLIP19.78■□□□□ 0.76
PFDN5-207ENST00000549759 RSPH4AQ5TD94 716 aa19.78■□□□□ 0.76
PFDN5-207ENST00000549759 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
PFDN5-207ENST00000549759 PLEKHH2Q8IVE3 1493 aa19.78■□□□□ 0.76
PFDN5-207ENST00000549759 KIAA1107Q9UPP5 1409 aa19.77■□□□□ 0.76
PFDN5-207ENST00000549759 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
PFDN5-207ENST00000549759 PREX2Q70Z35 1606 aa19.76■□□□□ 0.75
PFDN5-207ENST00000549759 MYOM3Q5VTT5 1437 aa19.75■□□□□ 0.75
PFDN5-207ENST00000549759 POGZQ7Z3K3 1410 aa19.75■□□□□ 0.75
PFDN5-207ENST00000549759 MIA2Q96PC5 1412 aa19.75■□□□□ 0.75
PFDN5-207ENST00000549759 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
PFDN5-207ENST00000549759 ZNF518AQ6AHZ1 1483 aa19.73■□□□□ 0.75
PFDN5-207ENST00000549759 CDC42BPAQ5VT25 1732 aa19.71■□□□□ 0.75
PFDN5-207ENST00000549759 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
PFDN5-207ENST00000549759 MAGI2Q86UL8 1455 aa19.71■□□□□ 0.75
PFDN5-207ENST00000549759 TSPY4P0CV99 314 aa19.7■□□□□ 0.74
PFDN5-207ENST00000549759 TSPY10P0CW01 314 aa19.7■□□□□ 0.74
PFDN5-207ENST00000549759 SPAG9O60271 1321 aaKnown RBP19.7■□□□□ 0.74
PFDN5-207ENST00000549759 TRAPPC8Q9Y2L5 1435 aa19.69■□□□□ 0.74
PFDN5-207ENST00000549759 ITSN2Q9NZM3 1697 aa19.69■□□□□ 0.74
PFDN5-207ENST00000549759 ARHGEF12Q9NZN5 1544 aa19.69■□□□□ 0.74
PFDN5-207ENST00000549759 ABCC1P33527 1531 aa19.68■□□□□ 0.74
PFDN5-207ENST00000549759 SAMD9LQ8IVG5 1584 aa19.66■□□□□ 0.74
PFDN5-207ENST00000549759 ARID4BQ4LE39 1312 aaPredicted RBP19.64■□□□□ 0.73
PFDN5-207ENST00000549759 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
PFDN5-207ENST00000549759 CAMSAP2Q08AD1 1489 aa19.64■□□□□ 0.73
PFDN5-207ENST00000549759 MBD5Q9P267 1494 aa19.64■□□□□ 0.73
PFDN5-207ENST00000549759 MLH3Q9UHC1 1453 aa19.64■□□□□ 0.73
PFDN5-207ENST00000549759 SYCP2Q9BX26 1530 aa19.64■□□□□ 0.73
PFDN5-207ENST00000549759 ZMYM4Q5VZL5 1548 aa19.63■□□□□ 0.73
PFDN5-207ENST00000549759 FAM50AQ14320 339 aaKnown RBP19.63■□□□□ 0.73
PFDN5-207ENST00000549759 FRMPD1Q5SYB0 1578 aa19.62■□□□□ 0.73
PFDN5-207ENST00000549759 ZFYVE16Q7Z3T8 1539 aa19.61■□□□□ 0.73
PFDN5-207ENST00000549759 YEATS2Q9ULM3 1422 aa19.6■□□□□ 0.73
PFDN5-207ENST00000549759 RICTORQ6R327 1708 aa19.6■□□□□ 0.73
PFDN5-207ENST00000549759 KDM5CP41229 1560 aa19.6■□□□□ 0.73
PFDN5-207ENST00000549759 ATP10AO60312 1499 aa19.6■□□□□ 0.73
PFDN5-207ENST00000549759 CCDC141Q6ZP82 1450 aa19.6■□□□□ 0.73
PFDN5-207ENST00000549759 RTEL1-TNFRSF6BF6WH68 1400 aa19.58■□□□□ 0.72
PFDN5-207ENST00000549759 TCOF1Q13428 1488 aaKnown RBP19.55■□□□□ 0.72
PFDN5-207ENST00000549759 C9orf84Q5VXU9 1444 aa19.54■□□□□ 0.72
PFDN5-207ENST00000549759 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
PFDN5-207ENST00000549759 PTPN23Q9H3S7 1636 aa19.53■□□□□ 0.72
PFDN5-207ENST00000549759 ARHGEF5Q12774 1597 aa19.53■□□□□ 0.72
PFDN5-207ENST00000549759 ARHGEF40Q8TER5 1519 aa19.52■□□□□ 0.72
PFDN5-207ENST00000549759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.51■□□□□ 0.71
PFDN5-207ENST00000549759 ABCC5O15440 1437 aa19.51■□□□□ 0.71
PFDN5-207ENST00000549759 ATP7AQ04656 1500 aa19.5■□□□□ 0.71
PFDN5-207ENST00000549759 KDM4FA0A1W2PPD8 638 aa19.49■□□□□ 0.71
PFDN5-207ENST00000549759 MLECQ14165 292 aa19.49■□□□□ 0.71
PFDN5-207ENST00000549759 DAPK1P53355 1430 aa19.49■□□□□ 0.71
PFDN5-207ENST00000549759 CHIC2Q9UKJ5 165 aa19.48■□□□□ 0.71
PFDN5-207ENST00000549759 DHX29Q7Z478 1369 aaKnown RBP19.47■□□□□ 0.71
PFDN5-207ENST00000549759 ITGAEP38570 1179 aa19.46■□□□□ 0.71
PFDN5-207ENST00000549759 AEBP2Q6ZN18 517 aaPredicted RBP19.46■□□□□ 0.71
PFDN5-207ENST00000549759 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
PFDN5-207ENST00000549759 RRP7BPQ9NSQ0 103 aa19.46■□□□□ 0.71
PFDN5-207ENST00000549759 A2MP01023 1474 aa19.46■□□□□ 0.71
PFDN5-207ENST00000549759 ANKRD30AQ9BXX3 1397 aa19.45■□□□□ 0.7
PFDN5-207ENST00000549759 DIP2CQ9Y2E4 1556 aa19.44■□□□□ 0.7
PFDN5-207ENST00000549759 RRBP1Q9P2E9 1410 aaKnown RBP19.44■□□□□ 0.7
PFDN5-207ENST00000549759 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
PFDN5-207ENST00000549759 KIDINS220Q9ULH0 1771 aa19.44■□□□□ 0.7
PFDN5-207ENST00000549759 INO80Q9ULG1 1556 aaPredicted RBP19.43■□□□□ 0.7
PFDN5-207ENST00000549759 REREQ9P2R6 1566 aa19.42■□□□□ 0.7
PFDN5-207ENST00000549759 KIF3BO15066 747 aa19.42■□□□□ 0.7
PFDN5-207ENST00000549759 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
PFDN5-207ENST00000549759 ABCA6Q8N139 1617 aa19.41■□□□□ 0.7
PFDN5-207ENST00000549759 GGT6Q6P531 493 aa19.41■□□□□ 0.7
PFDN5-207ENST00000549759 AGLP35573 1532 aa19.41■□□□□ 0.7
PFDN5-207ENST00000549759 MAST1Q9Y2H9 1570 aa19.4■□□□□ 0.7
PFDN5-207ENST00000549759 KIF15Q9NS87 1388 aa19.4■□□□□ 0.7
PFDN5-207ENST00000549759 NCOA1Q15788 1441 aa19.39■□□□□ 0.69
PFDN5-207ENST00000549759 DNMT1P26358 1616 aaKnown RBP19.39■□□□□ 0.69
PFDN5-207ENST00000549759 ROCK1Q13464 1354 aa19.35■□□□□ 0.69
PFDN5-207ENST00000549759 PTPRKQ15262 1439 aa19.34■□□□□ 0.69
PFDN5-207ENST00000549759 DUOX2Q9NRD8 1548 aa19.33■□□□□ 0.68
PFDN5-207ENST00000549759 ADGRL2O95490 1459 aa19.33■□□□□ 0.68
PFDN5-207ENST00000549759 ADGBQ8N7X0 1667 aa19.33■□□□□ 0.68
PFDN5-207ENST00000549759 PLXNC1O60486 1568 aa19.32■□□□□ 0.68
PFDN5-207ENST00000549759 WASHC2CQ9Y4E1 1318 aa19.31■□□□□ 0.68
PFDN5-207ENST00000549759 ERBINQ96RT1 1412 aa19.31■□□□□ 0.68
PFDN5-207ENST00000549759 CNTLNQ9NXG0 1405 aa19.3■□□□□ 0.68
PFDN5-207ENST00000549759 BCORL1Q5H9F3 1711 aa19.3■□□□□ 0.68
PFDN5-207ENST00000549759 ANKRD50Q9ULJ7 1429 aa19.28■□□□□ 0.68
PFDN5-207ENST00000549759 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
PFDN5-207ENST00000549759 ADAMTSL3P82987 1691 aa19.27■□□□□ 0.68
PFDN5-207ENST00000549759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.687e-8■■□□□ 12.6
PFDN5-207ENST00000549759 PTPRMP28827 1452 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms