RNA–Protein interactions for RNA: ENST00000549557.1

AC004801.1-201, humanhuman

BASIC

Gene AC004801.1, Length 360 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004801.1-201ENST00000549557 SCAPERQ9BY12 1400 aa21.28■■□□□ 1
AC004801.1-201ENST00000549557 ZFYVE16Q7Z3T8 1539 aa21.27■■□□□ 1
AC004801.1-201ENST00000549557 CASKIN1Q8WXD9 1431 aa21.27■■□□□ 1
AC004801.1-201ENST00000549557 PTPRMP28827 1452 aa21.26■□□□□ 0.99
AC004801.1-201ENST00000549557 ZNF518AQ6AHZ1 1483 aa21.21■□□□□ 0.99
AC004801.1-201ENST00000549557 ARHGAP5Q13017 1502 aa21.21■□□□□ 0.99
AC004801.1-201ENST00000549557 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
AC004801.1-201ENST00000549557 MADDQ8WXG6 1647 aa21.18■□□□□ 0.98
AC004801.1-201ENST00000549557 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
AC004801.1-201ENST00000549557 LRRIQ1Q96JM4 1722 aa21.18■□□□□ 0.98
AC004801.1-201ENST00000549557 ATP10AO60312 1499 aa21.17■□□□□ 0.98
AC004801.1-201ENST00000549557 YEATS2Q9ULM3 1422 aa21.16■□□□□ 0.98
AC004801.1-201ENST00000549557 C9orf84Q5VXU9 1444 aa21.15■□□□□ 0.98
AC004801.1-201ENST00000549557 RIMS1Q86UR5 1692 aaKnown RBP21.13■□□□□ 0.97
AC004801.1-201ENST00000549557 PREX2Q70Z35 1606 aa21.12■□□□□ 0.97
AC004801.1-201ENST00000549557 MYT1LQ9UL68 1186 aa21.12■□□□□ 0.97
AC004801.1-201ENST00000549557 CDC42BPBQ9Y5S2 1711 aa21.12■□□□□ 0.97
AC004801.1-201ENST00000549557 KDM5CP41229 1560 aa21.11■□□□□ 0.97
AC004801.1-201ENST00000549557 FER1L4A9Z1Z3 1794 aa21.08■□□□□ 0.96
AC004801.1-201ENST00000549557 MLH3Q9UHC1 1453 aa21.07■□□□□ 0.96
AC004801.1-201ENST00000549557 AFAP1Q8N556 730 aa21.07■□□□□ 0.96
AC004801.1-201ENST00000549557 REREQ9P2R6 1566 aa21.06■□□□□ 0.96
AC004801.1-201ENST00000549557 MLECQ14165 292 aa21.05■□□□□ 0.96
AC004801.1-201ENST00000549557 ABCC1P33527 1531 aa21.04■□□□□ 0.96
AC004801.1-201ENST00000549557 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
AC004801.1-201ENST00000549557 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
AC004801.1-201ENST00000549557 ITSN2Q9NZM3 1697 aa21.02■□□□□ 0.95
AC004801.1-201ENST00000549557 PLEKHH2Q8IVE3 1493 aa21.01■□□□□ 0.95
AC004801.1-201ENST00000549557 LMTK3Q96Q04 1460 aa21.01■□□□□ 0.95
AC004801.1-201ENST00000549557 SIGLEC1Q9BZZ2 1709 aa21.01■□□□□ 0.95
AC004801.1-201ENST00000549557 MTUS2Q5JR59 1369 aa21.01■□□□□ 0.95
AC004801.1-201ENST00000549557 ILDR1Q86SU0 546 aaPredicted RBP21.01■□□□□ 0.95
AC004801.1-201ENST00000549557 ESF1Q9H501 851 aaKnown RBP21■□□□□ 0.95
AC004801.1-201ENST00000549557 DIP2CQ9Y2E4 1556 aa20.99■□□□□ 0.95
AC004801.1-201ENST00000549557 CCNB3Q8WWL7 1395 aa20.98■□□□□ 0.95
AC004801.1-201ENST00000549557 AGLP35573 1532 aa20.98■□□□□ 0.95
AC004801.1-201ENST00000549557 TRAPPC8Q9Y2L5 1435 aa20.97■□□□□ 0.95
AC004801.1-201ENST00000549557 CFDP1Q9UEE9 299 aaPredicted RBP20.97■□□□□ 0.95
AC004801.1-201ENST00000549557 ZNF777Q9ULD5 760 aaPredicted RBP20.97■□□□□ 0.95
AC004801.1-201ENST00000549557 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
AC004801.1-201ENST00000549557 KIAA1107Q9UPP5 1409 aa20.96■□□□□ 0.95
AC004801.1-201ENST00000549557 SETD1BQ9UPS6 1966 aaKnown RBP20.96■□□□□ 0.95
AC004801.1-201ENST00000549557 PLPPR3Q6T4P5 718 aa20.95■□□□□ 0.94
AC004801.1-201ENST00000549557 ABCA6Q8N139 1617 aa20.94■□□□□ 0.94
AC004801.1-201ENST00000549557 CEP162Q5TB80 1403 aa20.93■□□□□ 0.94
AC004801.1-201ENST00000549557 KIDINS220Q9ULH0 1771 aa20.92■□□□□ 0.94
AC004801.1-201ENST00000549557 SPAG9O60271 1321 aaKnown RBP20.92■□□□□ 0.94
AC004801.1-201ENST00000549557 EHBP1L1Q8N3D4 1523 aa20.92■□□□□ 0.94
AC004801.1-201ENST00000549557 SAMD9LQ8IVG5 1584 aa20.92■□□□□ 0.94
AC004801.1-201ENST00000549557 PREX1Q8TCU6 1659 aa20.92■□□□□ 0.94
AC004801.1-201ENST00000549557 CNTLNQ9NXG0 1405 aa20.91■□□□□ 0.94
AC004801.1-201ENST00000549557 SYCP2Q9BX26 1530 aa20.89■□□□□ 0.94
AC004801.1-201ENST00000549557 FBXO41Q8TF61 875 aa20.88■□□□□ 0.93
AC004801.1-201ENST00000549557 HNRNPMP52272 730 aaKnown RBP eCLIP20.87■□□□□ 0.93
AC004801.1-201ENST00000549557 DMRT2Q9Y5R5 561 aa20.87■□□□□ 0.93
AC004801.1-201ENST00000549557 UHRF1BP1Q6BDS2 1440 aa20.87■□□□□ 0.93
AC004801.1-201ENST00000549557 HSPA2P54652 639 aa20.86■□□□□ 0.93
AC004801.1-201ENST00000549557 RSPH4AQ5TD94 716 aa20.85■□□□□ 0.93
AC004801.1-201ENST00000549557 ATP7AQ04656 1500 aa20.84■□□□□ 0.93
AC004801.1-201ENST00000549557 CEBPAP49715 358 aaPredicted RBP20.84■□□□□ 0.93
AC004801.1-201ENST00000549557 PPP6R1Q9UPN7 881 aa20.83■□□□□ 0.93
AC004801.1-201ENST00000549557 SUPT6HQ7KZ85 1726 aaKnown RBP20.81■□□□□ 0.92
AC004801.1-201ENST00000549557 TIAM1Q13009 1591 aa20.81■□□□□ 0.92
AC004801.1-201ENST00000549557 INO80Q9ULG1 1556 aaPredicted RBP20.8■□□□□ 0.92
AC004801.1-201ENST00000549557 C3P01024 1663 aa20.8■□□□□ 0.92
AC004801.1-201ENST00000549557 RTEL1-TNFRSF6BF6WH68 1400 aa20.8■□□□□ 0.92
AC004801.1-201ENST00000549557 A2MP01023 1474 aa20.8■□□□□ 0.92
AC004801.1-201ENST00000549557 MROH2AA6NES4 1674 aa20.8■□□□□ 0.92
AC004801.1-201ENST00000549557 ADGBQ8N7X0 1667 aa20.79■□□□□ 0.92
AC004801.1-201ENST00000549557 NPATQ14207 1427 aa20.77■□□□□ 0.91
AC004801.1-201ENST00000549557 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
AC004801.1-201ENST00000549557 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
AC004801.1-201ENST00000549557 NCOA2Q15596 1464 aa20.74■□□□□ 0.91
AC004801.1-201ENST00000549557 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
AC004801.1-201ENST00000549557 ZMYM3Q14202 1370 aa20.73■□□□□ 0.91
AC004801.1-201ENST00000549557 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
AC004801.1-201ENST00000549557 MAP3K1Q13233 1512 aa20.71■□□□□ 0.91
AC004801.1-201ENST00000549557 ZNF644Q9H582 1327 aaPredicted RBP20.71■□□□□ 0.91
AC004801.1-201ENST00000549557 TSPY4P0CV99 314 aa20.7■□□□□ 0.9
AC004801.1-201ENST00000549557 TSPY10P0CW01 314 aa20.7■□□□□ 0.9
AC004801.1-201ENST00000549557 GGT6Q6P531 493 aa20.7■□□□□ 0.9
AC004801.1-201ENST00000549557 DHX29Q7Z478 1369 aaKnown RBP20.69■□□□□ 0.9
AC004801.1-201ENST00000549557 CERKQ8TCT0 537 aa20.68■□□□□ 0.9
AC004801.1-201ENST00000549557 PTPRTO14522 1441 aa20.68■□□□□ 0.9
AC004801.1-201ENST00000549557 CAMSAP2Q08AD1 1489 aa20.68■□□□□ 0.9
AC004801.1-201ENST00000549557 LRRC9Q6ZRR7 1453 aa20.68■□□□□ 0.9
AC004801.1-201ENST00000549557 FAM135AQ9P2D6 1515 aa20.67■□□□□ 0.9
AC004801.1-201ENST00000549557 STRCQ7RTU9 1775 aa20.67■□□□□ 0.9
AC004801.1-201ENST00000549557 LOC105371045A0A1W2PR82 267 aa20.66■□□□□ 0.9
AC004801.1-201ENST00000549557 CLTCQ00610 1675 aaKnown RBP20.66■□□□□ 0.9
AC004801.1-201ENST00000549557 ARHGEF5Q12774 1597 aa20.65■□□□□ 0.9
AC004801.1-201ENST00000549557 APLP2Q06481 763 aa20.65■□□□□ 0.9
AC004801.1-201ENST00000549557 MIA2Q96PC5 1412 aa20.61■□□□□ 0.89
AC004801.1-201ENST00000549557 KIF3BO15066 747 aa20.6■□□□□ 0.89
AC004801.1-201ENST00000549557 NCOA1Q15788 1441 aa20.6■□□□□ 0.89
AC004801.1-201ENST00000549557 PTPRKQ15262 1439 aa20.59■□□□□ 0.89
AC004801.1-201ENST00000549557 ZNF142P52746 1687 aaPredicted RBP20.58■□□□□ 0.89
AC004801.1-201ENST00000549557 PKD2Q13563 968 aa20.58■□□□□ 0.89
AC004801.1-201ENST00000549557 CAMSAP1Q5T5Y3 1602 aa20.56■□□□□ 0.88
AC004801.1-201ENST00000549557 PLA2R1Q13018 1463 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms