RNA–Protein interactions for RNA: ENST00000549557.1

AC004801.1-201, humanhuman

BASIC

Gene AC004801.1, Length 360 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004801.1-201ENST00000549557 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
AC004801.1-201ENST00000549557 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
AC004801.1-201ENST00000549557 ABCC9O60706 1549 aa28.89■■■□□ 2.21
AC004801.1-201ENST00000549557 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.03
AC004801.1-201ENST00000549557 NACADO15069 1562 aa27.56■■■□□ 2
AC004801.1-201ENST00000549557 DCAF8L2P0C7V8 631 aa27.33■■□□□ 1.97
AC004801.1-201ENST00000549557 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.96
AC004801.1-201ENST00000549557 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
AC004801.1-201ENST00000549557 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
AC004801.1-201ENST00000549557 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
AC004801.1-201ENST00000549557 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
AC004801.1-201ENST00000549557 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.89
AC004801.1-201ENST00000549557 BICRAQ9NZM4 1560 aa26.73■■□□□ 1.87
AC004801.1-201ENST00000549557 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
AC004801.1-201ENST00000549557 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
AC004801.1-201ENST00000549557 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
AC004801.1-201ENST00000549557 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.78
AC004801.1-201ENST00000549557 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
AC004801.1-201ENST00000549557 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
AC004801.1-201ENST00000549557 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
AC004801.1-201ENST00000549557 SMARCA4P51532 1647 aa25.29■■□□□ 1.64
AC004801.1-201ENST00000549557 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
AC004801.1-201ENST00000549557 BAZ1AQ9NRL2 1556 aaPredicted RBP25.26■■□□□ 1.63
AC004801.1-201ENST00000549557 HMGXB3Q12766 1538 aa25.23■■□□□ 1.63
AC004801.1-201ENST00000549557 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
AC004801.1-201ENST00000549557 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
AC004801.1-201ENST00000549557 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
AC004801.1-201ENST00000549557 CUX2O14529 1486 aa25■■□□□ 1.59
AC004801.1-201ENST00000549557 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
AC004801.1-201ENST00000549557 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
AC004801.1-201ENST00000549557 NESP48681 1621 aa24.79■■□□□ 1.56
AC004801.1-201ENST00000549557 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
AC004801.1-201ENST00000549557 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
AC004801.1-201ENST00000549557 WIZO95785 1651 aa24.65■■□□□ 1.54
AC004801.1-201ENST00000549557 CADPSQ9ULU8 1353 aa24.63■■□□□ 1.53
AC004801.1-201ENST00000549557 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
AC004801.1-201ENST00000549557 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
AC004801.1-201ENST00000549557 RSF1Q96T23 1441 aaPredicted RBP24.5■■□□□ 1.51
AC004801.1-201ENST00000549557 TOP2AP11388 1531 aaKnown RBP24.42■■□□□ 1.5
AC004801.1-201ENST00000549557 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
AC004801.1-201ENST00000549557 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
AC004801.1-201ENST00000549557 CFTRP13569 1480 aa24.36■■□□□ 1.49
AC004801.1-201ENST00000549557 WDR62O43379 1518 aa24.34■■□□□ 1.49
AC004801.1-201ENST00000549557 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
AC004801.1-201ENST00000549557 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
AC004801.1-201ENST00000549557 CCDC88BA6NC98 1476 aa24.1■■□□□ 1.45
AC004801.1-201ENST00000549557 URB2Q14146 1524 aaKnown RBP24.04■■□□□ 1.44
AC004801.1-201ENST00000549557 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
AC004801.1-201ENST00000549557 IFT140Q96RY7 1462 aa23.89■■□□□ 1.42
AC004801.1-201ENST00000549557 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
AC004801.1-201ENST00000549557 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
AC004801.1-201ENST00000549557 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
AC004801.1-201ENST00000549557 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
AC004801.1-201ENST00000549557 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
AC004801.1-201ENST00000549557 EIF4G3O43432 1585 aaKnown RBP23.63■■□□□ 1.37
AC004801.1-201ENST00000549557 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
AC004801.1-201ENST00000549557 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
AC004801.1-201ENST00000549557 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
AC004801.1-201ENST00000549557 SOGA1O94964 1423 aa23.55■■□□□ 1.36
AC004801.1-201ENST00000549557 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.36
AC004801.1-201ENST00000549557 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
AC004801.1-201ENST00000549557 FGD5Q6ZNL6 1462 aa23.47■■□□□ 1.35
AC004801.1-201ENST00000549557 RAD54L2Q9Y4B4 1467 aa23.45■■□□□ 1.34
AC004801.1-201ENST00000549557 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
AC004801.1-201ENST00000549557 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
AC004801.1-201ENST00000549557 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
AC004801.1-201ENST00000549557 CUX1P39880 1505 aa23.43■■□□□ 1.34
AC004801.1-201ENST00000549557 CHD1O14646 1710 aa23.43■■□□□ 1.34
AC004801.1-201ENST00000549557 FBLN2P98095 1184 aa23.42■■□□□ 1.34
AC004801.1-201ENST00000549557 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
AC004801.1-201ENST00000549557 ARHGEF11O15085 1522 aa23.4■■□□□ 1.34
AC004801.1-201ENST00000549557 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
AC004801.1-201ENST00000549557 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
AC004801.1-201ENST00000549557 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
AC004801.1-201ENST00000549557 SNAPC4Q5SXM2 1469 aa23.32■■□□□ 1.32
AC004801.1-201ENST00000549557 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
AC004801.1-201ENST00000549557 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
AC004801.1-201ENST00000549557 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
AC004801.1-201ENST00000549557 SYNJ2O15056 1496 aa23.25■■□□□ 1.31
AC004801.1-201ENST00000549557 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
AC004801.1-201ENST00000549557 CYB5RLQ6IPT4 315 aa23.23■■□□□ 1.31
AC004801.1-201ENST00000549557 PBRM1Q86U86 1689 aa23.22■■□□□ 1.31
AC004801.1-201ENST00000549557 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
AC004801.1-201ENST00000549557 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
AC004801.1-201ENST00000549557 TOP2BQ02880 1626 aa23.17■■□□□ 1.3
AC004801.1-201ENST00000549557 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
AC004801.1-201ENST00000549557 ARAP1Q96P48 1450 aa23.14■■□□□ 1.29
AC004801.1-201ENST00000549557 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
AC004801.1-201ENST00000549557 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
AC004801.1-201ENST00000549557 FHAD1B1AJZ9 1412 aa23■■□□□ 1.27
AC004801.1-201ENST00000549557 ADAMTS12P58397 1594 aa22.98■■□□□ 1.27
AC004801.1-201ENST00000549557 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
AC004801.1-201ENST00000549557 NUP160Q12769 1436 aa22.93■■□□□ 1.26
AC004801.1-201ENST00000549557 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
AC004801.1-201ENST00000549557 SHROOM2Q13796 1616 aa22.81■■□□□ 1.24
AC004801.1-201ENST00000549557 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
AC004801.1-201ENST00000549557 JPH4Q96JJ6 628 aa22.74■■□□□ 1.23
AC004801.1-201ENST00000549557 CUL7Q14999 1698 aa22.72■■□□□ 1.23
AC004801.1-201ENST00000549557 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.22
AC004801.1-201ENST00000549557 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms