RNA–Protein interactions for RNA: ENST00000549140.1

LINC02394-201, Transcript of long intergenic non-protein coding RNA 2394, humanhuman

TSL 4 BASIC

Gene LINC02394, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02394-201ENST00000549140 C2orf72A6NCS6 295 aa13.05□□□□□ -0.32
LINC02394-201ENST00000549140 SNPHO15079 494 aa13.05□□□□□ -0.32
LINC02394-201ENST00000549140 KIF3CO14782 793 aa13.03□□□□□ -0.32
LINC02394-201ENST00000549140 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
LINC02394-201ENST00000549140 PDE4AP27815 886 aa13□□□□□ -0.33
LINC02394-201ENST00000549140 PLCB2Q00722 1185 aa12.99□□□□□ -0.33
LINC02394-201ENST00000549140 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
LINC02394-201ENST00000549140 CRISPLD2Q9H0B8 497 aa12.98□□□□□ -0.33
LINC02394-201ENST00000549140 CADPS2Q86UW7 1296 aa12.97□□□□□ -0.33
LINC02394-201ENST00000549140 NCKAP5LQ9HCH0 1330 aa12.95□□□□□ -0.34
LINC02394-201ENST00000549140 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
LINC02394-201ENST00000549140 FOXK1P85037 733 aa12.94□□□□□ -0.34
LINC02394-201ENST00000549140 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
LINC02394-201ENST00000549140 DSG2Q14126 1118 aa12.93□□□□□ -0.34
LINC02394-201ENST00000549140 HOXB3P14651 431 aaPredicted RBP12.92□□□□□ -0.34
LINC02394-201ENST00000549140 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
LINC02394-201ENST00000549140 PLPP6Q8IY26 295 aa12.91□□□□□ -0.34
LINC02394-201ENST00000549140 ZNF710Q8N1W2 664 aa12.91□□□□□ -0.34
LINC02394-201ENST00000549140 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
LINC02394-201ENST00000549140 PPP1R15BQ5SWA1 713 aa12.89□□□□□ -0.35
LINC02394-201ENST00000549140 DDX27Q96GQ7 796 aaKnown RBP12.89□□□□□ -0.35
LINC02394-201ENST00000549140 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
LINC02394-201ENST00000549140 ST18O60284 1047 aa12.88□□□□□ -0.35
LINC02394-201ENST00000549140 POTEMA6NI47 508 aa12.87□□□□□ -0.35
LINC02394-201ENST00000549140 MFSD10Q14728 455 aa12.87□□□□□ -0.35
LINC02394-201ENST00000549140 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
LINC02394-201ENST00000549140 ZSWIM6Q9HCJ5 1215 aa12.84□□□□□ -0.35
LINC02394-201ENST00000549140 SLC34A2O95436 690 aa12.83□□□□□ -0.36
LINC02394-201ENST00000549140 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
LINC02394-201ENST00000549140 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
LINC02394-201ENST00000549140 WDR70Q9NW82 654 aa12.8□□□□□ -0.36
LINC02394-201ENST00000549140 HOXB1P14653 301 aaPredicted RBP12.79□□□□□ -0.36
LINC02394-201ENST00000549140 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
LINC02394-201ENST00000549140 ARSIQ5FYB1 569 aa12.77□□□□□ -0.37
LINC02394-201ENST00000549140 PTCD2Q8WV60 388 aaKnown RBP12.77□□□□□ -0.37
LINC02394-201ENST00000549140 PCDHGA4Q9Y5G9 962 aa12.76□□□□□ -0.37
LINC02394-201ENST00000549140 TBC1D12O60347 775 aa12.75□□□□□ -0.37
LINC02394-201ENST00000549140 MARVELD3Q96A59 401 aa12.75□□□□□ -0.37
LINC02394-201ENST00000549140 EMP3P54852 163 aa12.74□□□□□ -0.37
LINC02394-201ENST00000549140 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC02394-201ENST00000549140 OXER1Q8TDS5 423 aa12.72□□□□□ -0.37
LINC02394-201ENST00000549140 KHSRPQ92945 711 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC02394-201ENST00000549140 CAMK2BQ13554 666 aa12.7□□□□□ -0.38
LINC02394-201ENST00000549140 NUDT7P0C024 238 aa12.69□□□□□ -0.38
LINC02394-201ENST00000549140 E2F4Q16254 413 aa12.69□□□□□ -0.38
LINC02394-201ENST00000549140 EMILIN3Q9NT22 766 aa12.68□□□□□ -0.38
LINC02394-201ENST00000549140 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
LINC02394-201ENST00000549140 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
LINC02394-201ENST00000549140 ERBB3P21860 1342 aa12.66□□□□□ -0.38
LINC02394-201ENST00000549140 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
LINC02394-201ENST00000549140 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
LINC02394-201ENST00000549140 HS3ST6Q96QI5 342 aa12.61□□□□□ -0.39
LINC02394-201ENST00000549140 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
LINC02394-201ENST00000549140 DPYSL4O14531 572 aa12.6□□□□□ -0.39
LINC02394-201ENST00000549140 VSIG10Q8N0Z9 540 aa12.6□□□□□ -0.39
LINC02394-201ENST00000549140 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
LINC02394-201ENST00000549140 EVI5O60447 810 aa12.59□□□□□ -0.39
LINC02394-201ENST00000549140 VARS2Q5ST30 1063 aaKnown RBP12.59□□□□□ -0.39
LINC02394-201ENST00000549140 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
LINC02394-201ENST00000549140 POTEB3A0JP26 581 aa12.55□□□□□ -0.4
LINC02394-201ENST00000549140 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
LINC02394-201ENST00000549140 POTEBQ6S5H4 581 aa12.55□□□□□ -0.4
LINC02394-201ENST00000549140 ARIH1Q9Y4X5 557 aaPredicted RBP12.55□□□□□ -0.4
LINC02394-201ENST00000549140 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
LINC02394-201ENST00000549140 ANO8Q9HCE9 1232 aaPredicted RBP12.54□□□□□ -0.4
LINC02394-201ENST00000549140 KCNV2Q8TDN2 545 aa12.53□□□□□ -0.4
LINC02394-201ENST00000549140 CDAN1Q8IWY9 1227 aa12.52□□□□□ -0.41
LINC02394-201ENST00000549140 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
LINC02394-201ENST00000549140 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
LINC02394-201ENST00000549140 PDIA6Q15084 440 aa12.5□□□□□ -0.41
LINC02394-201ENST00000549140 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
LINC02394-201ENST00000549140 PPP4R3BQ5MIZ7 849 aa12.48□□□□□ -0.41
LINC02394-201ENST00000549140 ZNF454Q8N9F8 522 aa12.47□□□□□ -0.41
LINC02394-201ENST00000549140 JPH4Q96JJ6 628 aa12.46□□□□□ -0.41
LINC02394-201ENST00000549140 FOSBP53539 338 aa12.45□□□□□ -0.42
LINC02394-201ENST00000549140 PTGER2P43116 358 aa12.42□□□□□ -0.42
LINC02394-201ENST00000549140 PHF14O94880 888 aa12.41□□□□□ -0.42
LINC02394-201ENST00000549140 DDX12PQ92771 950 aa12.41□□□□□ -0.42
LINC02394-201ENST00000549140 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
LINC02394-201ENST00000549140 PCDHGA10Q9Y5H3 936 aa12.4□□□□□ -0.42
LINC02394-201ENST00000549140 PBX2P40425 430 aa12.39□□□□□ -0.43
LINC02394-201ENST00000549140 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
LINC02394-201ENST00000549140 EPAS1Q99814 870 aa12.38□□□□□ -0.43
LINC02394-201ENST00000549140 FBXW7Q969H0 707 aa12.37□□□□□ -0.43
LINC02394-201ENST00000549140 KRTAP3-3Q9BYR6 98 aa12.37□□□□□ -0.43
LINC02394-201ENST00000549140 KRTAP3-2Q9BYR7 98 aa12.37□□□□□ -0.43
LINC02394-201ENST00000549140 GRXCR2A6NFK2 248 aa12.36□□□□□ -0.43
LINC02394-201ENST00000549140 ARHGAP33O14559 1287 aa12.36□□□□□ -0.43
LINC02394-201ENST00000549140 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
LINC02394-201ENST00000549140 AXIN2Q9Y2T1 843 aa12.36□□□□□ -0.43
LINC02394-201ENST00000549140 NBR1Q14596 966 aa12.35□□□□□ -0.43
LINC02394-201ENST00000549140 POTEEQ6S8J3 1075 aa12.35□□□□□ -0.43
LINC02394-201ENST00000549140 BCL2L12Q9HB09 334 aa12.35□□□□□ -0.43
LINC02394-201ENST00000549140 SLC24A1O60721 1099 aa12.34□□□□□ -0.43
LINC02394-201ENST00000549140 ADAM33Q9BZ11 813 aa12.34□□□□□ -0.43
LINC02394-201ENST00000549140 PTPREP23469 700 aa12.32□□□□□ -0.44
LINC02394-201ENST00000549140 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
LINC02394-201ENST00000549140 PSEN2P49810 448 aa12.31□□□□□ -0.44
LINC02394-201ENST00000549140 SEMA3EO15041 775 aa12.3□□□□□ -0.44
LINC02394-201ENST00000549140 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms