RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 ARHGEF40Q8TER5 1519 aa15.47■□□□□ 0.07
GCN1-205ENST00000548821 ESF1Q9H501 851 aaKnown RBP15.46■□□□□ 0.07
GCN1-205ENST00000548821 ARHGAP5Q13017 1502 aa15.46■□□□□ 0.07
GCN1-205ENST00000548821 ATP10AO60312 1499 aa15.46■□□□□ 0.06
GCN1-205ENST00000548821 FRMPD1Q5SYB0 1578 aa15.45■□□□□ 0.06
GCN1-205ENST00000548821 RICTORQ6R327 1708 aa15.45■□□□□ 0.06
GCN1-205ENST00000548821 ADAMTSL3P82987 1691 aa15.44■□□□□ 0.06
GCN1-205ENST00000548821 MYO5CQ9NQX4 1742 aa15.44■□□□□ 0.06
GCN1-205ENST00000548821 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
GCN1-205ENST00000548821 BCORL1Q5H9F3 1711 aa15.43■□□□□ 0.06
GCN1-205ENST00000548821 MLECQ14165 292 aa15.43■□□□□ 0.06
GCN1-205ENST00000548821 C9orf84Q5VXU9 1444 aa15.43■□□□□ 0.06
GCN1-205ENST00000548821 AFAP1Q8N556 730 aa15.42■□□□□ 0.06
GCN1-205ENST00000548821 YEATS2Q9ULM3 1422 aa15.4■□□□□ 0.06
GCN1-205ENST00000548821 CFDP1Q9UEE9 299 aaPredicted RBP15.38■□□□□ 0.05
GCN1-205ENST00000548821 MTUS2Q5JR59 1369 aa15.37■□□□□ 0.05
GCN1-205ENST00000548821 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
GCN1-205ENST00000548821 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
GCN1-205ENST00000548821 MADDQ8WXG6 1647 aa15.36■□□□□ 0.05
GCN1-205ENST00000548821 MLH3Q9UHC1 1453 aa15.36■□□□□ 0.05
GCN1-205ENST00000548821 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
GCN1-205ENST00000548821 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
GCN1-205ENST00000548821 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
GCN1-205ENST00000548821 PLEKHH2Q8IVE3 1493 aa15.35■□□□□ 0.05
GCN1-205ENST00000548821 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
GCN1-205ENST00000548821 SPAG9O60271 1321 aaKnown RBP15.33■□□□□ 0.04
GCN1-205ENST00000548821 KDM5CP41229 1560 aa15.32■□□□□ 0.04
GCN1-205ENST00000548821 RIMS1Q86UR5 1692 aaKnown RBP15.32■□□□□ 0.04
GCN1-205ENST00000548821 RSPH4AQ5TD94 716 aa15.31■□□□□ 0.04
GCN1-205ENST00000548821 KIAA1107Q9UPP5 1409 aa15.31■□□□□ 0.04
GCN1-205ENST00000548821 PREX2Q70Z35 1606 aa15.3■□□□□ 0.04
GCN1-205ENST00000548821 FBXO41Q8TF61 875 aa15.3■□□□□ 0.04
GCN1-205ENST00000548821 REREQ9P2R6 1566 aa15.29■□□□□ 0.04
GCN1-205ENST00000548821 ARHGEF12Q9NZN5 1544 aa15.29■□□□□ 0.04
GCN1-205ENST00000548821 CNTLNQ9NXG0 1405 aa15.29■□□□□ 0.04
GCN1-205ENST00000548821 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
GCN1-205ENST00000548821 LMTK3Q96Q04 1460 aa15.28■□□□□ 0.04
GCN1-205ENST00000548821 HNRNPMP52272 730 aaKnown RBP eCLIP15.28■□□□□ 0.04
GCN1-205ENST00000548821 ABCC1P33527 1531 aa15.27■□□□□ 0.04
GCN1-205ENST00000548821 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
GCN1-205ENST00000548821 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
GCN1-205ENST00000548821 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
GCN1-205ENST00000548821 AGLP35573 1532 aa15.27■□□□□ 0.03
GCN1-205ENST00000548821 CEP162Q5TB80 1403 aa15.26■□□□□ 0.03
GCN1-205ENST00000548821 FER1L4A9Z1Z3 1794 aa15.25■□□□□ 0.03
GCN1-205ENST00000548821 UHRF1BP1Q6BDS2 1440 aa15.25■□□□□ 0.03
GCN1-205ENST00000548821 LRRIQ1Q96JM4 1722 aa15.24■□□□□ 0.03
GCN1-205ENST00000548821 HSPA2P54652 639 aa15.24■□□□□ 0.03
GCN1-205ENST00000548821 CEBPAP49715 358 aaPredicted RBP15.23■□□□□ 0.03
GCN1-205ENST00000548821 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
GCN1-205ENST00000548821 TSPY4P0CV99 314 aa15.21■□□□□ 0.03
GCN1-205ENST00000548821 TSPY10P0CW01 314 aa15.21■□□□□ 0.03
GCN1-205ENST00000548821 APLP2Q06481 763 aa15.21■□□□□ 0.03
GCN1-205ENST00000548821 ITSN2Q9NZM3 1697 aa15.21■□□□□ 0.03
GCN1-205ENST00000548821 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
GCN1-205ENST00000548821 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
GCN1-205ENST00000548821 SAMD9LQ8IVG5 1584 aa15.19■□□□□ 0.02
GCN1-205ENST00000548821 SETD1BQ9UPS6 1966 aaKnown RBP15.18■□□□□ 0.02
GCN1-205ENST00000548821 RTEL1-TNFRSF6BF6WH68 1400 aa15.18■□□□□ 0.02
GCN1-205ENST00000548821 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
GCN1-205ENST00000548821 GGT6Q6P531 493 aa15.18■□□□□ 0.02
GCN1-205ENST00000548821 A2MP01023 1474 aa15.17■□□□□ 0.02
GCN1-205ENST00000548821 ABCA6Q8N139 1617 aa15.17■□□□□ 0.02
GCN1-205ENST00000548821 PREX1Q8TCU6 1659 aa15.16■□□□□ 0.02
GCN1-205ENST00000548821 ZMYM3Q14202 1370 aa15.16■□□□□ 0.02
GCN1-205ENST00000548821 ATP7AQ04656 1500 aa15.16■□□□□ 0.02
GCN1-205ENST00000548821 NPATQ14207 1427 aa15.16■□□□□ 0.02
GCN1-205ENST00000548821 SIGLEC1Q9BZZ2 1709 aa15.15■□□□□ 0.02
GCN1-205ENST00000548821 CERKQ8TCT0 537 aa15.15■□□□□ 0.02
GCN1-205ENST00000548821 KIDINS220Q9ULH0 1771 aa15.15■□□□□ 0.02
GCN1-205ENST00000548821 VPS8Q8N3P4 1428 aa15.13■□□□□ 0.01
GCN1-205ENST00000548821 DHX29Q7Z478 1369 aaKnown RBP15.12■□□□□ 0.01
GCN1-205ENST00000548821 ZNF644Q9H582 1327 aaPredicted RBP15.12■□□□□ 0.01
GCN1-205ENST00000548821 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
GCN1-205ENST00000548821 SUPT6HQ7KZ85 1726 aaKnown RBP15.11■□□□□ 0.01
GCN1-205ENST00000548821 PTPRTO14522 1441 aa15.1■□□□□ 0.01
GCN1-205ENST00000548821 LOC105371045A0A1W2PR82 267 aa15.1■□□□□ 0.01
GCN1-205ENST00000548821 PKD2Q13563 968 aa15.1■□□□□ 0.01
GCN1-205ENST00000548821 CCDC141Q6ZP82 1450 aa15.09■□□□□ 0.01
GCN1-205ENST00000548821 MBD5Q9P267 1494 aa15.09■□□□□ 0.01
GCN1-205ENST00000548821 KIF3BO15066 747 aa15.09■□□□□ 0.01
GCN1-205ENST00000548821 TIAM1Q13009 1591 aa15.09■□□□□ 0.01
GCN1-205ENST00000548821 MAP3K1Q13233 1512 aa15.08■□□□□ 0.01
GCN1-205ENST00000548821 WASHC2CQ9Y4E1 1318 aa15.08■□□□□ 0
GCN1-205ENST00000548821 INO80Q9ULG1 1556 aaPredicted RBP15.07■□□□□ 0
GCN1-205ENST00000548821 MROH2AA6NES4 1674 aa15.07■□□□□ 0
GCN1-205ENST00000548821 ADGBQ8N7X0 1667 aa15.07■□□□□ 0
GCN1-205ENST00000548821 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
GCN1-205ENST00000548821 C3P01024 1663 aa15.06■□□□□ 0
GCN1-205ENST00000548821 MIA2Q96PC5 1412 aa15.05■□□□□ -0
GCN1-205ENST00000548821 FAM135AQ9P2D6 1515 aa15.05■□□□□ -0
GCN1-205ENST00000548821 PLXNC1O60486 1568 aa15.05■□□□□ -0
GCN1-205ENST00000548821 CAMSAP2Q08AD1 1489 aa15.04■□□□□ -0
GCN1-205ENST00000548821 THEMISQ8N1K5 641 aaPredicted RBP15.02■□□□□ -0
GCN1-205ENST00000548821 NCOA1Q15788 1441 aa15.01□□□□□ -0.01
GCN1-205ENST00000548821 MYOM3Q5VTT5 1437 aa15.01□□□□□ -0.01
GCN1-205ENST00000548821 ARHGEF5Q12774 1597 aa15.01□□□□□ -0.01
GCN1-205ENST00000548821 PTPRKQ15262 1439 aa15□□□□□ -0.01
GCN1-205ENST00000548821 PLA2R1Q13018 1463 aa14.99□□□□□ -0.01
GCN1-205ENST00000548821 CLTCQ00610 1675 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms