RNA–Protein interactions for RNA: ENST00000548709.1

ERBB3-206, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-206ENST00000548709 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
ERBB3-206ENST00000548709 ATP1B4Q9UN42 357 aaPredicted RBP12.13□□□□□ -0.47
ERBB3-206ENST00000548709 CFAP74Q9C0B2 1584 aa12.13□□□□□ -0.47
ERBB3-206ENST00000548709 DISP3Q9P2K9 1392 aa12.12□□□□□ -0.47
ERBB3-206ENST00000548709 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
ERBB3-206ENST00000548709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.11□□□□□ -0.47
ERBB3-206ENST00000548709 CEBPAP49715 358 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-206ENST00000548709 FMN1Q68DA7 1419 aa12.1□□□□□ -0.47
ERBB3-206ENST00000548709 UHRF1BP1Q6BDS2 1440 aa12.1□□□□□ -0.47
ERBB3-206ENST00000548709 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
ERBB3-206ENST00000548709 AFAP1Q8N556 730 aa12.09□□□□□ -0.47
ERBB3-206ENST00000548709 RIMS1Q86UR5 1692 aaKnown RBP12.07□□□□□ -0.48
ERBB3-206ENST00000548709 PTPRTO14522 1441 aa12.07□□□□□ -0.48
ERBB3-206ENST00000548709 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
ERBB3-206ENST00000548709 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
ERBB3-206ENST00000548709 RICTORQ6R327 1708 aa12.06□□□□□ -0.48
ERBB3-206ENST00000548709 HECW1Q76N89 1606 aa12.05□□□□□ -0.48
ERBB3-206ENST00000548709 CLIP1P30622 1438 aa12.04□□□□□ -0.48
ERBB3-206ENST00000548709 TRAPPC8Q9Y2L5 1435 aa12.04□□□□□ -0.48
ERBB3-206ENST00000548709 ILDR2Q71H61 639 aa12.04□□□□□ -0.48
ERBB3-206ENST00000548709 TTC37Q6PGP7 1564 aa12.04□□□□□ -0.48
ERBB3-206ENST00000548709 TROQ12816 1431 aaPredicted RBP12.02□□□□□ -0.49
ERBB3-206ENST00000548709 CNTLNQ9NXG0 1405 aa12.02□□□□□ -0.49
ERBB3-206ENST00000548709 MLH3Q9UHC1 1453 aa12.01□□□□□ -0.49
ERBB3-206ENST00000548709 CDK13Q14004 1512 aaKnown RBP12□□□□□ -0.49
ERBB3-206ENST00000548709 PKD2Q13563 968 aa11.99□□□□□ -0.49
ERBB3-206ENST00000548709 PPP6R1Q9UPN7 881 aa11.99□□□□□ -0.49
ERBB3-206ENST00000548709 IQSEC2Q5JU85 1478 aa11.99□□□□□ -0.49
ERBB3-206ENST00000548709 SETD1BQ9UPS6 1966 aaKnown RBP11.98□□□□□ -0.49
ERBB3-206ENST00000548709 ARHGAP5Q13017 1502 aa11.97□□□□□ -0.49
ERBB3-206ENST00000548709 AGLP35573 1532 aa11.96□□□□□ -0.49
ERBB3-206ENST00000548709 NPATQ14207 1427 aa11.95□□□□□ -0.5
ERBB3-206ENST00000548709 REREQ9P2R6 1566 aa11.95□□□□□ -0.5
ERBB3-206ENST00000548709 FER1L4A9Z1Z3 1794 aa11.95□□□□□ -0.5
ERBB3-206ENST00000548709 ZMYM3Q14202 1370 aa11.94□□□□□ -0.5
ERBB3-206ENST00000548709 PREX1Q8TCU6 1659 aa11.94□□□□□ -0.5
ERBB3-206ENST00000548709 KDM5CP41229 1560 aa11.94□□□□□ -0.5
ERBB3-206ENST00000548709 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
ERBB3-206ENST00000548709 NCOA1Q15788 1441 aa11.94□□□□□ -0.5
ERBB3-206ENST00000548709 SPAG9O60271 1321 aaKnown RBP11.93□□□□□ -0.5
ERBB3-206ENST00000548709 ARHGAP35Q9NRY4 1499 aa11.93□□□□□ -0.5
ERBB3-206ENST00000548709 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
ERBB3-206ENST00000548709 KIF14Q15058 1648 aa11.92□□□□□ -0.5
ERBB3-206ENST00000548709 ZNF777Q9ULD5 760 aaPredicted RBP11.91□□□□□ -0.5
ERBB3-206ENST00000548709 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
ERBB3-206ENST00000548709 SIGLEC1Q9BZZ2 1709 aa11.9□□□□□ -0.5
ERBB3-206ENST00000548709 CFDP1Q9UEE9 299 aaPredicted RBP11.89□□□□□ -0.51
ERBB3-206ENST00000548709 CCDC18Q5T9S5 1454 aa11.89□□□□□ -0.51
ERBB3-206ENST00000548709 DIP2CQ9Y2E4 1556 aa11.88□□□□□ -0.51
ERBB3-206ENST00000548709 CASKIN1Q8WXD9 1431 aa11.88□□□□□ -0.51
ERBB3-206ENST00000548709 TOM1O60784 492 aa11.88□□□□□ -0.51
ERBB3-206ENST00000548709 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.51
ERBB3-206ENST00000548709 GGT6Q6P531 493 aa11.88□□□□□ -0.51
ERBB3-206ENST00000548709 LTBP4Q8N2S1 1624 aa11.88□□□□□ -0.51
ERBB3-206ENST00000548709 ZNF335Q9H4Z2 1342 aaPredicted RBP11.87□□□□□ -0.51
ERBB3-206ENST00000548709 STRCQ7RTU9 1775 aa11.87□□□□□ -0.51
ERBB3-206ENST00000548709 KIAA1107Q9UPP5 1409 aa11.87□□□□□ -0.51
ERBB3-206ENST00000548709 MYO5CQ9NQX4 1742 aa11.87□□□□□ -0.51
ERBB3-206ENST00000548709 PLA2R1Q13018 1463 aa11.86□□□□□ -0.51
ERBB3-206ENST00000548709 PLEKHH2Q8IVE3 1493 aa11.86□□□□□ -0.51
ERBB3-206ENST00000548709 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
ERBB3-206ENST00000548709 ABCC1P33527 1531 aa11.83□□□□□ -0.52
ERBB3-206ENST00000548709 RSPH4AQ5TD94 716 aa11.83□□□□□ -0.52
ERBB3-206ENST00000548709 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
ERBB3-206ENST00000548709 CCNB3Q8WWL7 1395 aa11.82□□□□□ -0.52
ERBB3-206ENST00000548709 CHIC1Q5VXU3 224 aa11.82□□□□□ -0.52
ERBB3-206ENST00000548709 ANKLE2Q86XL3 938 aa11.82□□□□□ -0.52
ERBB3-206ENST00000548709 THEMISQ8N1K5 641 aaPredicted RBP11.82□□□□□ -0.52
ERBB3-206ENST00000548709 PTPRKQ15262 1439 aa11.82□□□□□ -0.52
ERBB3-206ENST00000548709 A2MP01023 1474 aa11.81□□□□□ -0.52
ERBB3-206ENST00000548709 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
ERBB3-206ENST00000548709 GPATCH8Q9UKJ3 1502 aaKnown RBP11.81□□□□□ -0.52
ERBB3-206ENST00000548709 ABCA6Q8N139 1617 aa11.8□□□□□ -0.52
ERBB3-206ENST00000548709 TCOF1Q13428 1488 aaKnown RBP11.8□□□□□ -0.52
ERBB3-206ENST00000548709 C3P01024 1663 aa11.8□□□□□ -0.52
ERBB3-206ENST00000548709 HSPA1LP34931 641 aa11.79□□□□□ -0.52
ERBB3-206ENST00000548709 PIP4K2BP78356 416 aa11.79□□□□□ -0.52
ERBB3-206ENST00000548709 SAMD9LQ8IVG5 1584 aa11.79□□□□□ -0.52
ERBB3-206ENST00000548709 DHX29Q7Z478 1369 aaKnown RBP11.79□□□□□ -0.52
ERBB3-206ENST00000548709 MTUS2Q5JR59 1369 aa11.78□□□□□ -0.52
ERBB3-206ENST00000548709 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.52
ERBB3-206ENST00000548709 FYCO1Q9BQS8 1478 aa11.77□□□□□ -0.52
ERBB3-206ENST00000548709 PREX2Q70Z35 1606 aa11.77□□□□□ -0.53
ERBB3-206ENST00000548709 WASHC2CQ9Y4E1 1318 aa11.77□□□□□ -0.53
ERBB3-206ENST00000548709 A2ML1A8K2U0 1454 aa11.76□□□□□ -0.53
ERBB3-206ENST00000548709 KIF3BO15066 747 aa11.76□□□□□ -0.53
ERBB3-206ENST00000548709 PHF23Q9BUL5 403 aaPredicted RBP11.76□□□□□ -0.53
ERBB3-206ENST00000548709 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
ERBB3-206ENST00000548709 CDC42BPBQ9Y5S2 1711 aa11.75□□□□□ -0.53
ERBB3-206ENST00000548709 TNRQ92752 1358 aa11.75□□□□□ -0.53
ERBB3-206ENST00000548709 MROH2AA6NES4 1674 aa11.75□□□□□ -0.53
ERBB3-206ENST00000548709 TSPY4P0CV99 314 aa11.74□□□□□ -0.53
ERBB3-206ENST00000548709 TSPY10P0CW01 314 aa11.74□□□□□ -0.53
ERBB3-206ENST00000548709 FBXO31Q5XUX0 539 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-206ENST00000548709 CPS1P31327 1500 aa11.74□□□□□ -0.53
ERBB3-206ENST00000548709 ATP7AQ04656 1500 aa11.74□□□□□ -0.53
ERBB3-206ENST00000548709 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
ERBB3-206ENST00000548709 ITSN2Q9NZM3 1697 aa11.72□□□□□ -0.53
ERBB3-206ENST00000548709 CEP170BQ9Y4F5 1589 aaPredicted RBP11.72□□□□□ -0.53
ERBB3-206ENST00000548709 SHANK2Q9UPX8 1470 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms