RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 CARMIL2Q6F5E8 1435 aa12.64□□□□□ -0.39
CALCOCO1-210ENST00000548263 SNAPC4Q5SXM2 1469 aa12.63□□□□□ -0.39
CALCOCO1-210ENST00000548263 CARD11Q9BXL7 1154 aa12.63□□□□□ -0.39
CALCOCO1-210ENST00000548263 GRIN2BQ13224 1484 aa12.63□□□□□ -0.39
CALCOCO1-210ENST00000548263 CCDC18Q5T9S5 1454 aa12.63□□□□□ -0.39
CALCOCO1-210ENST00000548263 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
CALCOCO1-210ENST00000548263 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
CALCOCO1-210ENST00000548263 CASKIN1Q8WXD9 1431 aa12.61□□□□□ -0.39
CALCOCO1-210ENST00000548263 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
CALCOCO1-210ENST00000548263 EIF5BO60841 1220 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 MSH5O43196 834 aa12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 NCOA2Q15596 1464 aa12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 PCF11O94913 1555 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 CDK13Q14004 1512 aaKnown RBP12.59□□□□□ -0.39
CALCOCO1-210ENST00000548263 NEFMP07197 916 aa12.59□□□□□ -0.39
CALCOCO1-210ENST00000548263 CANXP27824 592 aaKnown RBP12.58□□□□□ -0.4
CALCOCO1-210ENST00000548263 CCDC184Q52MB2 194 aa12.58□□□□□ -0.4
CALCOCO1-210ENST00000548263 TIAM1Q13009 1591 aa12.58□□□□□ -0.4
CALCOCO1-210ENST00000548263 NUDCQ9Y266 331 aa12.58□□□□□ -0.4
CALCOCO1-210ENST00000548263 PTPRGP23470 1445 aa12.57□□□□□ -0.4
CALCOCO1-210ENST00000548263 ZBED9Q6R2W3 1325 aa12.57□□□□□ -0.4
CALCOCO1-210ENST00000548263 PRG4Q92954 1404 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO1-210ENST00000548263 NUP155O75694 1391 aa12.56□□□□□ -0.4
CALCOCO1-210ENST00000548263 MYOM3Q5VTT5 1437 aa12.56□□□□□ -0.4
CALCOCO1-210ENST00000548263 UACAQ9BZF9 1416 aa12.55□□□□□ -0.4
CALCOCO1-210ENST00000548263 IPO9Q96P70 1041 aaKnown RBP12.55□□□□□ -0.4
CALCOCO1-210ENST00000548263 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
CALCOCO1-210ENST00000548263 IFT140Q96RY7 1462 aa12.53□□□□□ -0.4
CALCOCO1-210ENST00000548263 TARBP1Q13395 1621 aaKnown RBP12.53□□□□□ -0.4
CALCOCO1-210ENST00000548263 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.4
CALCOCO1-210ENST00000548263 PLB1Q6P1J6 1458 aa12.52□□□□□ -0.41
CALCOCO1-210ENST00000548263 PPM1GO15355 546 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO1-210ENST00000548263 CC2D1BQ5T0F9 858 aaKnown RBP12.51□□□□□ -0.41
CALCOCO1-210ENST00000548263 GGT6Q6P531 493 aa12.51□□□□□ -0.41
CALCOCO1-210ENST00000548263 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
CALCOCO1-210ENST00000548263 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
CALCOCO1-210ENST00000548263 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
CALCOCO1-210ENST00000548263 RCAN3Q9UKA8 241 aa12.5□□□□□ -0.41
CALCOCO1-210ENST00000548263 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO1-210ENST00000548263 KIF7Q2M1P5 1343 aa12.49□□□□□ -0.41
CALCOCO1-210ENST00000548263 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO1-210ENST00000548263 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
CALCOCO1-210ENST00000548263 CNTLNQ9NXG0 1405 aa12.48□□□□□ -0.41
CALCOCO1-210ENST00000548263 RGS3P49796 1198 aa12.47□□□□□ -0.41
CALCOCO1-210ENST00000548263 MLECQ14165 292 aa12.47□□□□□ -0.41
CALCOCO1-210ENST00000548263 ARXQ96QS3 562 aa12.47□□□□□ -0.41
CALCOCO1-210ENST00000548263 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
CALCOCO1-210ENST00000548263 NUTM2DQ5VT03 806 aaPredicted RBP12.46□□□□□ -0.41
CALCOCO1-210ENST00000548263 ANKRD30AQ9BXX3 1397 aa12.46□□□□□ -0.41
CALCOCO1-210ENST00000548263 EFCAB5A4FU69 1503 aa12.46□□□□□ -0.41
CALCOCO1-210ENST00000548263 TCERG1O14776 1098 aaKnown RBP12.46□□□□□ -0.42
CALCOCO1-210ENST00000548263 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.42
CALCOCO1-210ENST00000548263 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 EXOC6Q8TAG9 804 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 IQGAP2Q13576 1575 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 C11orf95C9JLR9 678 aaPredicted RBP12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 KIF3BO15066 747 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 NBPF8Q3BBV2 869 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 EFCAB2Q5VUJ9 269 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
CALCOCO1-210ENST00000548263 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
CALCOCO1-210ENST00000548263 GRIN2AQ12879 1464 aa12.43□□□□□ -0.42
CALCOCO1-210ENST00000548263 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
CALCOCO1-210ENST00000548263 ST20-MTHFSA0A0A6YYL1 179 aa12.43□□□□□ -0.42
CALCOCO1-210ENST00000548263 CUL7Q14999 1698 aa12.43□□□□□ -0.42
CALCOCO1-210ENST00000548263 KIAA0586Q9BVV6 1533 aa12.42□□□□□ -0.42
CALCOCO1-210ENST00000548263 SAFB2Q14151 953 aaKnown RBP eCLIP12.42□□□□□ -0.42
CALCOCO1-210ENST00000548263 PDE4AP27815 886 aa12.42□□□□□ -0.42
CALCOCO1-210ENST00000548263 RALBP1Q15311 655 aa12.42□□□□□ -0.42
CALCOCO1-210ENST00000548263 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 PLIN1O60240 522 aa12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 AKNAQ7Z591 1439 aa12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 UPF2Q9HAU5 1272 aaKnown RBP12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 USP47Q96K76 1375 aa12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 NAIPQ13075 1403 aa12.4□□□□□ -0.42
CALCOCO1-210ENST00000548263 RRP1P56182 461 aaKnown RBP12.39□□□□□ -0.43
CALCOCO1-210ENST00000548263 SPAG9O60271 1321 aaKnown RBP12.39□□□□□ -0.43
CALCOCO1-210ENST00000548263 ABCA5Q8WWZ7 1642 aa12.39□□□□□ -0.43
CALCOCO1-210ENST00000548263 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
CALCOCO1-210ENST00000548263 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 ESF1Q9H501 851 aaKnown RBP12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 KTN1Q86UP2 1357 aaKnown RBP12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 MAP3K1Q13233 1512 aa12.37□□□□□ -0.43
CALCOCO1-210ENST00000548263 KIF15Q9NS87 1388 aa12.37□□□□□ -0.43
CALCOCO1-210ENST00000548263 SLC4A3P48751 1232 aa12.37□□□□□ -0.43
CALCOCO1-210ENST00000548263 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
CALCOCO1-210ENST00000548263 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 ROCK2O75116 1388 aaKnown RBP12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 ARID4BQ4LE39 1312 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 TROQ12816 1431 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 EHBP1L1Q8N3D4 1523 aa12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 TMF1P82094 1093 aa12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 ANKRD50Q9ULJ7 1429 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms