RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 PCF11O94913 1555 aaKnown RBP30.69■■■□□ 2.5
CHERP-204ENST00000546538 ZFYVE16Q7Z3T8 1539 aa30.68■■■□□ 2.5
CHERP-204ENST00000546538 ARID4BQ4LE39 1312 aaPredicted RBP30.68■■■□□ 2.5
CHERP-204ENST00000546538 CASKIN1Q8WXD9 1431 aa30.65■■■□□ 2.5
CHERP-204ENST00000546538 CDK11AQ9UQ88 783 aaPredicted RBP30.64■■■□□ 2.49
CHERP-204ENST00000546538 MAGI2Q86UL8 1455 aa30.64■■■□□ 2.49
CHERP-204ENST00000546538 RIMS1Q86UR5 1692 aaKnown RBP30.6■■■□□ 2.49
CHERP-204ENST00000546538 EFCAB2Q5VUJ9 269 aa30.6■■■□□ 2.49
CHERP-204ENST00000546538 CDC42BPBQ9Y5S2 1711 aa30.57■■■□□ 2.48
CHERP-204ENST00000546538 CLIP1P30622 1438 aa30.57■■■□□ 2.48
CHERP-204ENST00000546538 ARHGAP5Q13017 1502 aa30.56■■■□□ 2.48
CHERP-204ENST00000546538 ILDR1Q86SU0 546 aaPredicted RBP30.56■■■□□ 2.48
CHERP-204ENST00000546538 CCDC18Q5T9S5 1454 aa30.54■■■□□ 2.48
CHERP-204ENST00000546538 KDM5CP41229 1560 aa30.52■■■□□ 2.48
CHERP-204ENST00000546538 LMTK3Q96Q04 1460 aa30.5■■■□□ 2.47
CHERP-204ENST00000546538 FYCO1Q9BQS8 1478 aa30.5■■■□□ 2.47
CHERP-204ENST00000546538 PREX2Q70Z35 1606 aa30.5■■■□□ 2.47
CHERP-204ENST00000546538 ATP10AO60312 1499 aa30.5■■■□□ 2.47
CHERP-204ENST00000546538 ZNF518AQ6AHZ1 1483 aa30.49■■■□□ 2.47
CHERP-204ENST00000546538 AFAP1Q8N556 730 aa30.48■■■□□ 2.47
CHERP-204ENST00000546538 ARHGEF12Q9NZN5 1544 aa30.48■■■□□ 2.47
CHERP-204ENST00000546538 C9orf84Q5VXU9 1444 aa30.46■■■□□ 2.47
CHERP-204ENST00000546538 MLECQ14165 292 aa30.45■■■□□ 2.46
CHERP-204ENST00000546538 CDC42BPAQ5VT25 1732 aa30.43■■■□□ 2.46
CHERP-204ENST00000546538 FER1L4A9Z1Z3 1794 aa30.43■■■□□ 2.46
CHERP-204ENST00000546538 ABCC1P33527 1531 aa30.43■■■□□ 2.46
CHERP-204ENST00000546538 TRAPPC8Q9Y2L5 1435 aa30.41■■■□□ 2.46
CHERP-204ENST00000546538 DIP2CQ9Y2E4 1556 aa30.41■■■□□ 2.46
CHERP-204ENST00000546538 ABCA6Q8N139 1617 aa30.38■■■□□ 2.45
CHERP-204ENST00000546538 ITSN2Q9NZM3 1697 aa30.38■■■□□ 2.45
CHERP-204ENST00000546538 PLPPR3Q6T4P5 718 aa30.37■■■□□ 2.45
CHERP-204ENST00000546538 MLH3Q9UHC1 1453 aa30.36■■■□□ 2.45
CHERP-204ENST00000546538 REREQ9P2R6 1566 aa30.33■■■□□ 2.45
CHERP-204ENST00000546538 GPATCH8Q9UKJ3 1502 aaKnown RBP30.32■■■□□ 2.44
CHERP-204ENST00000546538 SAMD9LQ8IVG5 1584 aa30.31■■■□□ 2.44
CHERP-204ENST00000546538 HSPA2P54652 639 aa30.3■■■□□ 2.44
CHERP-204ENST00000546538 KIDINS220Q9ULH0 1771 aa30.29■■■□□ 2.44
CHERP-204ENST00000546538 CEBPAP49715 358 aaPredicted RBP30.24■■■□□ 2.43
CHERP-204ENST00000546538 SYCP2Q9BX26 1530 aa30.24■■■□□ 2.43
CHERP-204ENST00000546538 MYT1LQ9UL68 1186 aa30.22■■■□□ 2.43
CHERP-204ENST00000546538 AGLP35573 1532 aa30.22■■■□□ 2.43
CHERP-204ENST00000546538 ZNF777Q9ULD5 760 aaPredicted RBP30.21■■■□□ 2.43
CHERP-204ENST00000546538 CEP162Q5TB80 1403 aa30.2■■■□□ 2.43
CHERP-204ENST00000546538 HNRNPMP52272 730 aaKnown RBP eCLIP30.16■■■□□ 2.42
CHERP-204ENST00000546538 PREX1Q8TCU6 1659 aa30.16■■■□□ 2.42
CHERP-204ENST00000546538 MTUS2Q5JR59 1369 aa30.14■■■□□ 2.42
CHERP-204ENST00000546538 KIAA1107Q9UPP5 1409 aa30.13■■■□□ 2.41
CHERP-204ENST00000546538 TIAM1Q13009 1591 aa30.13■■■□□ 2.41
CHERP-204ENST00000546538 CCNB3Q8WWL7 1395 aa30.13■■■□□ 2.41
CHERP-204ENST00000546538 C3P01024 1663 aa30.12■■■□□ 2.41
CHERP-204ENST00000546538 CFDP1Q9UEE9 299 aaPredicted RBP30.11■■■□□ 2.41
CHERP-204ENST00000546538 INO80Q9ULG1 1556 aaPredicted RBP30.1■■■□□ 2.41
CHERP-204ENST00000546538 EHBP1L1Q8N3D4 1523 aa30.09■■■□□ 2.41
CHERP-204ENST00000546538 ATP7AQ04656 1500 aa30.08■■■□□ 2.41
CHERP-204ENST00000546538 SPAG9O60271 1321 aaKnown RBP30.07■■■□□ 2.4
CHERP-204ENST00000546538 ZNF644Q9H582 1327 aaPredicted RBP30.07■■■□□ 2.4
CHERP-204ENST00000546538 FBXO41Q8TF61 875 aa30.06■■■□□ 2.4
CHERP-204ENST00000546538 PLEKHH2Q8IVE3 1493 aa30.06■■■□□ 2.4
CHERP-204ENST00000546538 PLXNC1O60486 1568 aa30.05■■■□□ 2.4
CHERP-204ENST00000546538 SETD1BQ9UPS6 1966 aaKnown RBP30.02■■■□□ 2.4
CHERP-204ENST00000546538 SUPT6HQ7KZ85 1726 aaKnown RBP30.02■■■□□ 2.4
CHERP-204ENST00000546538 MBD5Q9P267 1494 aa30.02■■■□□ 2.4
CHERP-204ENST00000546538 STRCQ7RTU9 1775 aa30.02■■■□□ 2.4
CHERP-204ENST00000546538 UHRF1BP1Q6BDS2 1440 aa30■■■□□ 2.39
CHERP-204ENST00000546538 LOC105371045A0A1W2PR82 267 aa29.99■■■□□ 2.39
CHERP-204ENST00000546538 A2MP01023 1474 aa29.97■■■□□ 2.39
CHERP-204ENST00000546538 CNTLNQ9NXG0 1405 aa29.96■■■□□ 2.39
CHERP-204ENST00000546538 NCOA2Q15596 1464 aa29.95■■■□□ 2.39
CHERP-204ENST00000546538 MROH2AA6NES4 1674 aa29.94■■■□□ 2.38
CHERP-204ENST00000546538 ESF1Q9H501 851 aaKnown RBP29.91■■■□□ 2.38
CHERP-204ENST00000546538 CLTCQ00610 1675 aaKnown RBP29.89■■■□□ 2.38
CHERP-204ENST00000546538 ADGBQ8N7X0 1667 aa29.89■■■□□ 2.38
CHERP-204ENST00000546538 ZMYM3Q14202 1370 aa29.88■■■□□ 2.37
CHERP-204ENST00000546538 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
CHERP-204ENST00000546538 CAMSAP2Q08AD1 1489 aa29.86■■■□□ 2.37
CHERP-204ENST00000546538 NPATQ14207 1427 aa29.85■■■□□ 2.37
CHERP-204ENST00000546538 RTEL1-TNFRSF6BF6WH68 1400 aa29.84■■■□□ 2.37
CHERP-204ENST00000546538 CERKQ8TCT0 537 aa29.84■■■□□ 2.37
CHERP-204ENST00000546538 LRRC9Q6ZRR7 1453 aa29.82■■■□□ 2.36
CHERP-204ENST00000546538 CCDC141Q6ZP82 1450 aa29.81■■■□□ 2.36
CHERP-204ENST00000546538 GGT6Q6P531 493 aa29.8■■■□□ 2.36
CHERP-204ENST00000546538 PTPRKQ15262 1439 aa29.79■■■□□ 2.36
CHERP-204ENST00000546538 NCOA1Q15788 1441 aa29.78■■■□□ 2.36
CHERP-204ENST00000546538 DHX29Q7Z478 1369 aaKnown RBP29.78■■■□□ 2.36
CHERP-204ENST00000546538 KANK4Q5T7N3 995 aaPredicted RBP29.76■■■□□ 2.35
CHERP-204ENST00000546538 PTPRTO14522 1441 aa29.76■■■□□ 2.35
CHERP-204ENST00000546538 MYO3AQ8NEV4 1616 aa29.74■■■□□ 2.35
CHERP-204ENST00000546538 DMRT2Q9Y5R5 561 aa29.74■■■□□ 2.35
CHERP-204ENST00000546538 ARHGEF5Q12774 1597 aa29.74■■■□□ 2.35
CHERP-204ENST00000546538 CAMSAP1Q5T5Y3 1602 aa29.73■■■□□ 2.35
CHERP-204ENST00000546538 ZNF142P52746 1687 aaPredicted RBP29.72■■■□□ 2.35
CHERP-204ENST00000546538 MAP3K1Q13233 1512 aa29.71■■■□□ 2.35
CHERP-204ENST00000546538 PPP6R1Q9UPN7 881 aa29.7■■■□□ 2.34
CHERP-204ENST00000546538 CEP170BQ9Y4F5 1589 aaPredicted RBP29.68■■■□□ 2.34
CHERP-204ENST00000546538 LTBP4Q8N2S1 1624 aa29.67■■■□□ 2.34
CHERP-204ENST00000546538 RSPH4AQ5TD94 716 aa29.66■■■□□ 2.34
CHERP-204ENST00000546538 KIF3BO15066 747 aa29.65■■■□□ 2.34
CHERP-204ENST00000546538 NCKAP5LQ9HCH0 1330 aa29.62■■■□□ 2.33
CHERP-204ENST00000546538 KDM5DQ9BY66 1539 aa29.61■■■□□ 2.33
CHERP-204ENST00000546538 MAST1Q9Y2H9 1570 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms