RNA–Protein interactions for RNA: ENST00000546160.5

PDE4D-226, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 7,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-226ENST00000546160 FGD1P98174 961 aa8.19□□□□□ -1.1
PDE4D-226ENST00000546160 HIRIP3Q9BW71 556 aaPredicted RBP8.19□□□□□ -1.1
PDE4D-226ENST00000546160 KTN1Q86UP2 1357 aaKnown RBP8.19□□□□□ -1.1
PDE4D-226ENST00000546160 NRDCO43847 1150 aa8.19□□□□□ -1.1
PDE4D-226ENST00000546160 KCNJ4P48050 445 aa8.19□□□□□ -1.1
PDE4D-226ENST00000546160 MORC1Q86VD1 984 aa8.19□□□□□ -1.1
PDE4D-226ENST00000546160 IPO8O15397 1037 aaKnown RBP8.18□□□□□ -1.1
PDE4D-226ENST00000546160 CUX1P39880 1505 aa8.18□□□□□ -1.1
PDE4D-226ENST00000546160 CC2D1BQ5T0F9 858 aaKnown RBP8.17□□□□□ -1.1
PDE4D-226ENST00000546160 FANCD2Q9BXW9 1451 aa8.17□□□□□ -1.1
PDE4D-226ENST00000546160 NBR1Q14596 966 aa8.17□□□□□ -1.1
PDE4D-226ENST00000546160 MLECQ14165 292 aa8.17□□□□□ -1.1
PDE4D-226ENST00000546160 SPAG9O60271 1321 aaKnown RBP8.17□□□□□ -1.1
PDE4D-226ENST00000546160 HSP90AB1P08238 724 aaKnown RBP8.16□□□□□ -1.1
PDE4D-226ENST00000546160 GGT6Q6P531 493 aa8.16□□□□□ -1.1
PDE4D-226ENST00000546160 ATAD2BQ9ULI0 1458 aa8.16□□□□□ -1.1
PDE4D-226ENST00000546160 PPP4R2Q9NY27 417 aa8.16□□□□□ -1.1
PDE4D-226ENST00000546160 PTMAP06454 111 aaKnown RBP8.16□□□□□ -1.1
PDE4D-226ENST00000546160 PTMSP20962 102 aa8.16□□□□□ -1.1
PDE4D-226ENST00000546160 KAT6BQ8WYB5 2073 aa8.15□□□□□ -1.1
PDE4D-226ENST00000546160 RALBP1Q15311 655 aa8.15□□□□□ -1.1
PDE4D-226ENST00000546160 NEUROD2Q15784 382 aa8.15□□□□□ -1.11
PDE4D-226ENST00000546160 TERF2IPQ9NYB0 399 aa8.15□□□□□ -1.11
PDE4D-226ENST00000546160 CCER2I3L3R5 266 aa8.15□□□□□ -1.11
PDE4D-226ENST00000546160 PHLDB1Q86UU1 1377 aa8.14□□□□□ -1.11
PDE4D-226ENST00000546160 NUP155O75694 1391 aa8.14□□□□□ -1.11
PDE4D-226ENST00000546160 L1TD1Q5T7N2 865 aaKnown RBP8.14□□□□□ -1.11
PDE4D-226ENST00000546160 TNNT2P45379 298 aaPredicted RBP8.14□□□□□ -1.11
PDE4D-226ENST00000546160 GPATCH3Q96I76 525 aa8.14□□□□□ -1.11
PDE4D-226ENST00000546160 FRAT1Q92837 279 aaPredicted RBP8.14□□□□□ -1.11
PDE4D-226ENST00000546160 PKD2Q13563 968 aa8.13□□□□□ -1.11
PDE4D-226ENST00000546160 LMOD3Q0VAK6 560 aa8.13□□□□□ -1.11
PDE4D-226ENST00000546160 IRX6P78412 446 aaPredicted RBP8.13□□□□□ -1.11
PDE4D-226ENST00000546160 SUPT16HQ9Y5B9 1047 aaKnown RBP8.13□□□□□ -1.11
PDE4D-226ENST00000546160 PAK3O75914 559 aaPredicted RBP8.12□□□□□ -1.11
PDE4D-226ENST00000546160 KIAA1211Q6ZU35 1233 aa8.12□□□□□ -1.11
PDE4D-226ENST00000546160 HSCBQ8IWL3 235 aa8.12□□□□□ -1.11
PDE4D-226ENST00000546160 GOLGA6L4A6NEF3 574 aa8.11□□□□□ -1.11
PDE4D-226ENST00000546160 MPHOSPH9Q99550 1183 aa8.11□□□□□ -1.11
PDE4D-226ENST00000546160 STK26Q9P289 416 aa8.11□□□□□ -1.11
PDE4D-226ENST00000546160 WASHC2CQ9Y4E1 1318 aa8.11□□□□□ -1.11
PDE4D-226ENST00000546160 GAPVD1Q14C86 1478 aa8.11□□□□□ -1.11
PDE4D-226ENST00000546160 TDRD9Q8NDG6 1382 aaKnown RBP8.11□□□□□ -1.11
PDE4D-226ENST00000546160 ERICH6BQ5W0A0 696 aa8.11□□□□□ -1.11
PDE4D-226ENST00000546160 DNTTIP2Q5QJE6 756 aaKnown RBP8.1□□□□□ -1.11
PDE4D-226ENST00000546160 KIF21BO75037 1637 aa8.1□□□□□ -1.11
PDE4D-226ENST00000546160 SUPT6HQ7KZ85 1726 aaKnown RBP8.1□□□□□ -1.11
PDE4D-226ENST00000546160 CSB-PGBD3P0DP91 1061 aa8.1□□□□□ -1.11
PDE4D-226ENST00000546160 SIN3AQ96ST3 1273 aa8.1□□□□□ -1.11
PDE4D-226ENST00000546160 NAP1L2Q9ULW6 460 aaPredicted RBP8.1□□□□□ -1.11
PDE4D-226ENST00000546160 JPH4Q96JJ6 628 aa8.1□□□□□ -1.11
PDE4D-226ENST00000546160 HTATSF1O43719 755 aaKnown RBP8.1□□□□□ -1.11
PDE4D-226ENST00000546160 UNC13AQ9UPW8 1703 aa8.09□□□□□ -1.11
PDE4D-226ENST00000546160 GNL2Q13823 731 aaKnown RBP8.09□□□□□ -1.12
PDE4D-226ENST00000546160 RAB3GAP2Q9H2M9 1393 aa8.08□□□□□ -1.12
PDE4D-226ENST00000546160 KIF3BO15066 747 aa8.08□□□□□ -1.12
PDE4D-226ENST00000546160 CCDC144AA2RUR9 1427 aa8.08□□□□□ -1.12
PDE4D-226ENST00000546160 PMFBP1Q8TBY8 1022 aa8.08□□□□□ -1.12
PDE4D-226ENST00000546160 CCDC34Q96HJ3 373 aa8.08□□□□□ -1.12
PDE4D-226ENST00000546160 STK31Q9BXU1 1019 aa8.08□□□□□ -1.12
PDE4D-226ENST00000546160 HMMRO75330 724 aa8.07□□□□□ -1.12
PDE4D-226ENST00000546160 CHAF1AQ13111 956 aaPredicted RBP8.07□□□□□ -1.12
PDE4D-226ENST00000546160 KIAA2012Q0VF49 1180 aa8.07□□□□□ -1.12
PDE4D-226ENST00000546160 SAFB2Q14151 953 aaKnown RBP eCLIP8.06□□□□□ -1.12
PDE4D-226ENST00000546160 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
PDE4D-226ENST00000546160 NGDNQ8NEJ9 315 aaKnown RBP8.06□□□□□ -1.12
PDE4D-226ENST00000546160 SOX12O15370 315 aa8.06□□□□□ -1.12
PDE4D-226ENST00000546160 TAF7LQ5H9L4 462 aa8.06□□□□□ -1.12
PDE4D-226ENST00000546160 PTPRGP23470 1445 aa8.06□□□□□ -1.12
PDE4D-226ENST00000546160 FHOD3Q2V2M9 1422 aa8.06□□□□□ -1.12
PDE4D-226ENST00000546160 RWDD1Q9H446 243 aaPredicted RBP8.06□□□□□ -1.12
PDE4D-226ENST00000546160 CSPP1Q1MSJ5 1256 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 CHMP4CQ96CF2 233 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 U2AF1L5P0DN76 240 aaPredicted RBP8.05□□□□□ -1.12
PDE4D-226ENST00000546160 HSPA5P11021 654 aaKnown RBP8.05□□□□□ -1.12
PDE4D-226ENST00000546160 RGS3P49796 1198 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 U2AF1Q01081 240 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDE4D-226ENST00000546160 KIF15Q9NS87 1388 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 HNRNPMP52272 730 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDE4D-226ENST00000546160 OSCARQ8IYS5 282 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 HECW1Q76N89 1606 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 G3V3G9 751 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 DCAF8Q5TAQ9 597 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 CUL7Q14999 1698 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 FGD5Q6ZNL6 1462 aa8.05□□□□□ -1.12
PDE4D-226ENST00000546160 VGFO15240 615 aaPredicted RBP8.05□□□□□ -1.12
PDE4D-226ENST00000546160 AMPHP49418 695 aa8.04□□□□□ -1.12
PDE4D-226ENST00000546160 GORABQ5T7V8 394 aa8.04□□□□□ -1.12
PDE4D-226ENST00000546160 STAC3Q96MF2 364 aa8.04□□□□□ -1.12
PDE4D-226ENST00000546160 CC2D2AQ9P2K1 1620 aa8.03□□□□□ -1.12
PDE4D-226ENST00000546160 EVC2Q86UK5 1308 aa8.03□□□□□ -1.12
PDE4D-226ENST00000546160 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDE4D-226ENST00000546160 SYAP1Q96A49 352 aaPredicted RBP8.03□□□□□ -1.12
PDE4D-226ENST00000546160 LRRFIP1Q32MZ4 808 aaKnown RBP8.03□□□□□ -1.12
PDE4D-226ENST00000546160 CCDC9Q9Y3X0 531 aaKnown RBP8.03□□□□□ -1.12
PDE4D-226ENST00000546160 TPM4P67936 248 aa8.03□□□□□ -1.12
PDE4D-226ENST00000546160 ERICH3Q5RHP9 1530 aa8.03□□□□□ -1.12
PDE4D-226ENST00000546160 PDE3BQ13370 1112 aa8.03□□□□□ -1.12
PDE4D-226ENST00000546160 ISY1Q9ULR0 285 aaKnown RBP8.03□□□□□ -1.12
PDE4D-226ENST00000546160 EFCAB5A4FU69 1503 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms