RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 CDC42BPBQ9Y5S2 1711 aa30.4■■■□□ 2.46
SDR39U1-203ENST00000544691 APLP2Q06481 763 aa30.39■■■□□ 2.46
SDR39U1-203ENST00000544691 GPATCH8Q9UKJ3 1502 aaKnown RBP30.38■■■□□ 2.45
SDR39U1-203ENST00000544691 EFCAB2Q5VUJ9 269 aa30.37■■■□□ 2.45
SDR39U1-203ENST00000544691 NCOA2Q15596 1464 aa30.35■■■□□ 2.45
SDR39U1-203ENST00000544691 CCNB3Q8WWL7 1395 aa30.35■■■□□ 2.45
SDR39U1-203ENST00000544691 SUPT6HQ7KZ85 1726 aaKnown RBP30.35■■■□□ 2.45
SDR39U1-203ENST00000544691 RAPGEF3O95398 923 aa30.33■■■□□ 2.45
SDR39U1-203ENST00000544691 ADGRL1O94910 1474 aa30.32■■■□□ 2.44
SDR39U1-203ENST00000544691 FRMPD1Q5SYB0 1578 aa30.29■■■□□ 2.44
SDR39U1-203ENST00000544691 SCAPERQ9BY12 1400 aa30.28■■■□□ 2.44
SDR39U1-203ENST00000544691 DENND4BO75064 1496 aaPredicted RBP30.28■■■□□ 2.44
SDR39U1-203ENST00000544691 CFDP1Q9UEE9 299 aaPredicted RBP30.26■■■□□ 2.43
SDR39U1-203ENST00000544691 ZNF777Q9ULD5 760 aaPredicted RBP30.24■■■□□ 2.43
SDR39U1-203ENST00000544691 RICTORQ6R327 1708 aa30.24■■■□□ 2.43
SDR39U1-203ENST00000544691 ITSN2Q9NZM3 1697 aa30.23■■■□□ 2.43
SDR39U1-203ENST00000544691 SAMD9LQ8IVG5 1584 aa30.23■■■□□ 2.43
SDR39U1-203ENST00000544691 ABCC1P33527 1531 aa30.22■■■□□ 2.43
SDR39U1-203ENST00000544691 POGZQ7Z3K3 1410 aa30.21■■■□□ 2.43
SDR39U1-203ENST00000544691 ARHGEF12Q9NZN5 1544 aa30.2■■■□□ 2.42
SDR39U1-203ENST00000544691 ZNF644Q9H582 1327 aaPredicted RBP30.16■■■□□ 2.42
SDR39U1-203ENST00000544691 SYCP2Q9BX26 1530 aa30.14■■■□□ 2.42
SDR39U1-203ENST00000544691 AFAP1Q8N556 730 aa30.14■■■□□ 2.42
SDR39U1-203ENST00000544691 TRAPPC8Q9Y2L5 1435 aa30.14■■■□□ 2.42
SDR39U1-203ENST00000544691 ZNF518AQ6AHZ1 1483 aa30.13■■■□□ 2.41
SDR39U1-203ENST00000544691 ZMYM4Q5VZL5 1548 aa30.13■■■□□ 2.41
SDR39U1-203ENST00000544691 MYOM3Q5VTT5 1437 aa30.12■■■□□ 2.41
SDR39U1-203ENST00000544691 HNRNPMP52272 730 aaKnown RBP eCLIP30.1■■■□□ 2.41
SDR39U1-203ENST00000544691 KIAA1107Q9UPP5 1409 aa30.09■■■□□ 2.41
SDR39U1-203ENST00000544691 PLEKHH2Q8IVE3 1493 aa30.09■■■□□ 2.41
SDR39U1-203ENST00000544691 KDM5CP41229 1560 aa30.08■■■□□ 2.41
SDR39U1-203ENST00000544691 PPARGC1BQ86YN6 1023 aaKnown RBP30.07■■■□□ 2.4
SDR39U1-203ENST00000544691 CAMSAP2Q08AD1 1489 aa30.07■■■□□ 2.4
SDR39U1-203ENST00000544691 YEATS2Q9ULM3 1422 aa30.06■■■□□ 2.4
SDR39U1-203ENST00000544691 ARHGEF40Q8TER5 1519 aa30.04■■■□□ 2.4
SDR39U1-203ENST00000544691 MAGI2Q86UL8 1455 aa30.03■■■□□ 2.4
SDR39U1-203ENST00000544691 MBD5Q9P267 1494 aa30.03■■■□□ 2.4
SDR39U1-203ENST00000544691 MIA2Q96PC5 1412 aa30.03■■■□□ 2.4
SDR39U1-203ENST00000544691 ZFYVE16Q7Z3T8 1539 aa30.02■■■□□ 2.4
SDR39U1-203ENST00000544691 HECW2Q9P2P5 1572 aa30■■■□□ 2.39
SDR39U1-203ENST00000544691 MLH3Q9UHC1 1453 aa29.97■■■□□ 2.39
SDR39U1-203ENST00000544691 FGD6Q6ZV73 1430 aa29.97■■■□□ 2.39
SDR39U1-203ENST00000544691 MYT1LQ9UL68 1186 aa29.96■■■□□ 2.39
SDR39U1-203ENST00000544691 PTPN23Q9H3S7 1636 aa29.93■■■□□ 2.38
SDR39U1-203ENST00000544691 KIDINS220Q9ULH0 1771 aa29.93■■■□□ 2.38
SDR39U1-203ENST00000544691 SPAG9O60271 1321 aaKnown RBP29.92■■■□□ 2.38
SDR39U1-203ENST00000544691 CCDC141Q6ZP82 1450 aa29.91■■■□□ 2.38
SDR39U1-203ENST00000544691 ABCA6Q8N139 1617 aa29.91■■■□□ 2.38
SDR39U1-203ENST00000544691 DIP2CQ9Y2E4 1556 aa29.9■■■□□ 2.38
SDR39U1-203ENST00000544691 ARHGEF5Q12774 1597 aa29.89■■■□□ 2.38
SDR39U1-203ENST00000544691 INO80Q9ULG1 1556 aaPredicted RBP29.89■■■□□ 2.38
SDR39U1-203ENST00000544691 SIGLEC1Q9BZZ2 1709 aa29.88■■■□□ 2.37
SDR39U1-203ENST00000544691 ATP10AO60312 1499 aa29.88■■■□□ 2.37
SDR39U1-203ENST00000544691 ATP7AQ04656 1500 aa29.88■■■□□ 2.37
SDR39U1-203ENST00000544691 TCOF1Q13428 1488 aaKnown RBP29.87■■■□□ 2.37
SDR39U1-203ENST00000544691 C9orf84Q5VXU9 1444 aa29.86■■■□□ 2.37
SDR39U1-203ENST00000544691 KDM4FA0A1W2PPD8 638 aa29.85■■■□□ 2.37
SDR39U1-203ENST00000544691 RSPH4AQ5TD94 716 aa29.85■■■□□ 2.37
SDR39U1-203ENST00000544691 ARID4BQ4LE39 1312 aaPredicted RBP29.83■■■□□ 2.37
SDR39U1-203ENST00000544691 RTEL1-TNFRSF6BF6WH68 1400 aa29.79■■■□□ 2.36
SDR39U1-203ENST00000544691 FAM50AQ14320 339 aaKnown RBP29.78■■■□□ 2.36
SDR39U1-203ENST00000544691 TSPY4P0CV99 314 aa29.77■■■□□ 2.36
SDR39U1-203ENST00000544691 TSPY10P0CW01 314 aa29.77■■■□□ 2.36
SDR39U1-203ENST00000544691 REREQ9P2R6 1566 aa29.77■■■□□ 2.36
SDR39U1-203ENST00000544691 ABCC5O15440 1437 aa29.77■■■□□ 2.36
SDR39U1-203ENST00000544691 DNMT1P26358 1616 aaKnown RBP29.75■■■□□ 2.35
SDR39U1-203ENST00000544691 DAPK1P53355 1430 aa29.74■■■□□ 2.35
SDR39U1-203ENST00000544691 BCORL1Q5H9F3 1711 aa29.73■■■□□ 2.35
SDR39U1-203ENST00000544691 CROCC2H7BZ55 1655 aa29.72■■■□□ 2.35
SDR39U1-203ENST00000544691 MAST1Q9Y2H9 1570 aa29.72■■■□□ 2.35
SDR39U1-203ENST00000544691 A2MP01023 1474 aa29.7■■■□□ 2.35
SDR39U1-203ENST00000544691 MLECQ14165 292 aa29.7■■■□□ 2.34
SDR39U1-203ENST00000544691 PLXNC1O60486 1568 aa29.69■■■□□ 2.34
SDR39U1-203ENST00000544691 SHANK2Q9UPX8 1470 aa29.69■■■□□ 2.34
SDR39U1-203ENST00000544691 ADGBQ8N7X0 1667 aa29.69■■■□□ 2.34
SDR39U1-203ENST00000544691 ADAMTSL3P82987 1691 aa29.68■■■□□ 2.34
SDR39U1-203ENST00000544691 AGLP35573 1532 aa29.67■■■□□ 2.34
SDR39U1-203ENST00000544691 RRBP1Q9P2E9 1410 aaKnown RBP29.64■■■□□ 2.34
SDR39U1-203ENST00000544691 MADDQ8WXG6 1647 aa29.63■■■□□ 2.33
SDR39U1-203ENST00000544691 CHIC2Q9UKJ5 165 aa29.63■■■□□ 2.33
SDR39U1-203ENST00000544691 DHX29Q7Z478 1369 aaKnown RBP29.62■■■□□ 2.33
SDR39U1-203ENST00000544691 PTPRKQ15262 1439 aa29.59■■■□□ 2.33
SDR39U1-203ENST00000544691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.59■■■□□ 2.33
SDR39U1-203ENST00000544691 AEBP2Q6ZN18 517 aaPredicted RBP29.56■■■□□ 2.32
SDR39U1-203ENST00000544691 RRP7BPQ9NSQ0 103 aa29.56■■■□□ 2.32
SDR39U1-203ENST00000544691 KIF15Q9NS87 1388 aa29.56■■■□□ 2.32
SDR39U1-203ENST00000544691 ITGAEP38570 1179 aa29.55■■■□□ 2.32
SDR39U1-203ENST00000544691 RIMS1Q86UR5 1692 aaKnown RBP29.54■■■□□ 2.32
SDR39U1-203ENST00000544691 NCOA1Q15788 1441 aa29.53■■■□□ 2.32
SDR39U1-203ENST00000544691 ANKRD30AQ9BXX3 1397 aa29.53■■■□□ 2.32
SDR39U1-203ENST00000544691 FER1L4A9Z1Z3 1794 aa29.53■■■□□ 2.32
SDR39U1-203ENST00000544691 ADGRL2O95490 1459 aa29.52■■■□□ 2.32
SDR39U1-203ENST00000544691 PTPRMP28827 1452 aa29.52■■■□□ 2.32
SDR39U1-203ENST00000544691 KIF3BO15066 747 aa29.51■■■□□ 2.32
SDR39U1-203ENST00000544691 DUOX2Q9NRD8 1548 aa29.51■■■□□ 2.31
SDR39U1-203ENST00000544691 GGT6Q6P531 493 aa29.5■■■□□ 2.31
SDR39U1-203ENST00000544691 ERBINQ96RT1 1412 aa29.43■■■□□ 2.3
SDR39U1-203ENST00000544691 EIF2AK4Q9P2K8 1649 aaKnown RBP29.43■■■□□ 2.3
SDR39U1-203ENST00000544691 PLPPR3Q6T4P5 718 aa29.41■■■□□ 2.3
SDR39U1-203ENST00000544691 ROCK1Q13464 1354 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms