RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 GPHNQ9NQX3 736 aaPredicted RBP5.82□□□□□ -1.48
YBX3-214ENST00000544501 MFSD10Q14728 455 aa5.81□□□□□ -1.48
YBX3-214ENST00000544501 C3orf67Q6ZVT6 689 aa5.81□□□□□ -1.48
YBX3-214ENST00000544501 TMC2Q8TDI7 906 aa5.81□□□□□ -1.48
YBX3-214ENST00000544501 LARP6Q9BRS8 491 aaKnown RBP5.81□□□□□ -1.48
YBX3-214ENST00000544501 DDX27Q96GQ7 796 aaKnown RBP5.8□□□□□ -1.48
YBX3-214ENST00000544501 KIF3CO14782 793 aa5.79□□□□□ -1.48
YBX3-214ENST00000544501 MAMSTRQ6ZN01 415 aa5.79□□□□□ -1.48
YBX3-214ENST00000544501 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.79□□□□□ -1.48
YBX3-214ENST00000544501 FOXK1P85037 733 aa5.78□□□□□ -1.48
YBX3-214ENST00000544501 P3H3Q8IVL6 736 aa5.78□□□□□ -1.48
YBX3-214ENST00000544501 C2orf72A6NCS6 295 aa5.77□□□□□ -1.49
YBX3-214ENST00000544501 POTEB2H3BUK9 544 aa5.77□□□□□ -1.49
YBX3-214ENST00000544501 POTEJP0CG39 1038 aa5.77□□□□□ -1.49
YBX3-214ENST00000544501 E2F4Q16254 413 aa5.77□□□□□ -1.49
YBX3-214ENST00000544501 DSG2Q14126 1118 aa5.76□□□□□ -1.49
YBX3-214ENST00000544501 PPP1R15BQ5SWA1 713 aa5.76□□□□□ -1.49
YBX3-214ENST00000544501 TMEM92Q6UXU6 159 aa5.76□□□□□ -1.49
YBX3-214ENST00000544501 SCUBE2Q9NQ36 999 aa5.76□□□□□ -1.49
YBX3-214ENST00000544501 CAMK2BQ13554 666 aa5.75□□□□□ -1.49
YBX3-214ENST00000544501 ARIH1Q9Y4X5 557 aaPredicted RBP5.74□□□□□ -1.49
YBX3-214ENST00000544501 PLPP6Q8IY26 295 aa5.73□□□□□ -1.49
YBX3-214ENST00000544501 KCNV2Q8TDN2 545 aa5.73□□□□□ -1.49
YBX3-214ENST00000544501 ARHGEF1Q92888 912 aaKnown RBP5.73□□□□□ -1.49
YBX3-214ENST00000544501 BCANQ96GW7 911 aa5.73□□□□□ -1.49
YBX3-214ENST00000544501 LHX8Q68G74 356 aa5.72□□□□□ -1.49
YBX3-214ENST00000544501 SLC34A2O95436 690 aa5.71□□□□□ -1.5
YBX3-214ENST00000544501 SLAIN1Q8ND83 568 aa5.7□□□□□ -1.5
YBX3-214ENST00000544501 NBR1Q14596 966 aa5.69□□□□□ -1.5
YBX3-214ENST00000544501 OTUD5Q96G74 571 aa5.69□□□□□ -1.5
YBX3-214ENST00000544501 OXER1Q8TDS5 423 aa5.68□□□□□ -1.5
YBX3-214ENST00000544501 PTCD2Q8WV60 388 aaKnown RBP5.68□□□□□ -1.5
YBX3-214ENST00000544501 EMILIN3Q9NT22 766 aa5.68□□□□□ -1.5
YBX3-214ENST00000544501 TBC1D12O60347 775 aa5.67□□□□□ -1.5
YBX3-214ENST00000544501 SPDYE16A6NNV3 312 aaPredicted RBP5.66□□□□□ -1.5
YBX3-214ENST00000544501 SNPHO15079 494 aa5.66□□□□□ -1.5
YBX3-214ENST00000544501 MAP3K9P80192 1104 aa5.66□□□□□ -1.5
YBX3-214ENST00000544501 DOK7Q18PE1 504 aa5.66□□□□□ -1.5
YBX3-214ENST00000544501 DPYSL4O14531 572 aa5.65□□□□□ -1.5
YBX3-214ENST00000544501 RIMBP2O15034 1052 aa5.65□□□□□ -1.5
YBX3-214ENST00000544501 PDIA6Q15084 440 aa5.65□□□□□ -1.5
YBX3-214ENST00000544501 ZSWIM6Q9HCJ5 1215 aa5.65□□□□□ -1.5
YBX3-214ENST00000544501 HOXB3P14651 431 aaPredicted RBP5.64□□□□□ -1.51
YBX3-214ENST00000544501 UPF1Q92900 1129 aaKnown RBP eCLIP5.63□□□□□ -1.51
YBX3-214ENST00000544501 TESPA1A2RU30 521 aaPredicted RBP5.62□□□□□ -1.51
YBX3-214ENST00000544501 ZNF316A6NFI3 1004 aaPredicted RBP5.62□□□□□ -1.51
YBX3-214ENST00000544501 PCDHGA4Q9Y5G9 962 aa5.62□□□□□ -1.51
YBX3-214ENST00000544501 TULP1O00294 542 aaPredicted RBP5.61□□□□□ -1.51
YBX3-214ENST00000544501 SEMA3EO15041 775 aa5.61□□□□□ -1.51
YBX3-214ENST00000544501 SMYD5Q6GMV2 418 aa5.61□□□□□ -1.51
YBX3-214ENST00000544501 ZNF710Q8N1W2 664 aa5.61□□□□□ -1.51
YBX3-214ENST00000544501 ANO8Q9HCE9 1232 aaPredicted RBP5.61□□□□□ -1.51
YBX3-214ENST00000544501 EVI5O60447 810 aa5.6□□□□□ -1.51
YBX3-214ENST00000544501 PTGER2P43116 358 aa5.6□□□□□ -1.51
YBX3-214ENST00000544501 GPR153Q6NV75 609 aa5.6□□□□□ -1.51
YBX3-214ENST00000544501 KDM4FA0A1W2PPD8 638 aa5.59□□□□□ -1.51
YBX3-214ENST00000544501 ARSIQ5FYB1 569 aa5.58□□□□□ -1.52
YBX3-214ENST00000544501 HOXB1P14653 301 aaPredicted RBP5.57□□□□□ -1.52
YBX3-214ENST00000544501 MLLT3P42568 568 aaPredicted RBP5.56□□□□□ -1.52
YBX3-214ENST00000544501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.56□□□□□ -1.52
YBX3-214ENST00000544501 PSDA5PKW4 1024 aaPredicted RBP5.55□□□□□ -1.52
YBX3-214ENST00000544501 PHF14O94880 888 aa5.55□□□□□ -1.52
YBX3-214ENST00000544501 NUDT7P0C024 238 aa5.55□□□□□ -1.52
YBX3-214ENST00000544501 GRXCR2A6NFK2 248 aa5.54□□□□□ -1.52
YBX3-214ENST00000544501 DDX12PQ92771 950 aa5.54□□□□□ -1.52
YBX3-214ENST00000544501 KHSRPQ92945 711 aaKnown RBP eCLIP5.54□□□□□ -1.52
YBX3-214ENST00000544501 JPH4Q96JJ6 628 aa5.54□□□□□ -1.52
YBX3-214ENST00000544501 EPAS1Q99814 870 aa5.54□□□□□ -1.52
YBX3-214ENST00000544501 OSBPP22059 807 aa5.53□□□□□ -1.52
YBX3-214ENST00000544501 LMOD2Q6P5Q4 547 aa5.53□□□□□ -1.52
YBX3-214ENST00000544501 FBXW7Q969H0 707 aa5.53□□□□□ -1.52
YBX3-214ENST00000544501 ST18O60284 1047 aa5.52□□□□□ -1.53
YBX3-214ENST00000544501 FOSBP53539 338 aa5.52□□□□□ -1.53
YBX3-214ENST00000544501 TYW1BQ6NUM6 668 aa5.52□□□□□ -1.53
YBX3-214ENST00000544501 LHX6Q9UPM6 363 aa5.52□□□□□ -1.53
YBX3-214ENST00000544501 PCDHGA10Q9Y5H3 936 aa5.52□□□□□ -1.53
YBX3-214ENST00000544501 EN1Q05925 392 aaPredicted RBP5.5□□□□□ -1.53
YBX3-214ENST00000544501 PPP4R3BQ5MIZ7 849 aa5.5□□□□□ -1.53
YBX3-214ENST00000544501 RBM26Q5T8P6 1007 aaKnown RBP5.5□□□□□ -1.53
YBX3-214ENST00000544501 ZNF454Q8N9F8 522 aa5.5□□□□□ -1.53
YBX3-214ENST00000544501 ZDHHC16Q969W1 377 aa5.5□□□□□ -1.53
YBX3-214ENST00000544501 FAM163AQ96GL9 167 aaPredicted RBP5.5□□□□□ -1.53
YBX3-214ENST00000544501 EMP3P54852 163 aa5.48□□□□□ -1.53
YBX3-214ENST00000544501 GPIHBP1Q8IV16 184 aa5.48□□□□□ -1.53
YBX3-214ENST00000544501 ERBB3P21860 1342 aa5.48□□□□□ -1.53
YBX3-214ENST00000544501 MAP3K7O43318 606 aa5.47□□□□□ -1.53
YBX3-214ENST00000544501 PRIM1P49642 420 aaKnown RBP5.47□□□□□ -1.53
YBX3-214ENST00000544501 CERKQ8TCT0 537 aa5.47□□□□□ -1.53
YBX3-214ENST00000544501 ZC3H15Q8WU90 426 aaKnown RBP5.47□□□□□ -1.53
YBX3-214ENST00000544501 BCL2L12Q9HB09 334 aa5.47□□□□□ -1.53
YBX3-214ENST00000544501 NUTM2FA1L443 756 aa5.46□□□□□ -1.54
YBX3-214ENST00000544501 FCHSD2O94868 740 aa5.46□□□□□ -1.54
YBX3-214ENST00000544501 TPRNQ4KMQ1 711 aa5.46□□□□□ -1.54
YBX3-214ENST00000544501 C6orf132Q5T0Z8 1188 aa5.46□□□□□ -1.54
YBX3-214ENST00000544501 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
YBX3-214ENST00000544501 ADAM33Q9BZ11 813 aa5.46□□□□□ -1.54
YBX3-214ENST00000544501 ZMYND10O75800 440 aa5.45□□□□□ -1.54
YBX3-214ENST00000544501 PTGDRQ13258 359 aa5.45□□□□□ -1.54
YBX3-214ENST00000544501 VARS2Q5ST30 1063 aaKnown RBP5.45□□□□□ -1.54
YBX3-214ENST00000544501 MARVELD3Q96A59 401 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms