RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 PTPN23Q9H3S7 1636 aa18.23■□□□□ 0.51
DDB1-223ENST00000543658 GPATCH8Q9UKJ3 1502 aaKnown RBP18.23■□□□□ 0.51
DDB1-223ENST00000543658 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
DDB1-223ENST00000543658 PLCH2O75038 1416 aa18.21■□□□□ 0.51
DDB1-223ENST00000543658 MIA2Q96PC5 1412 aa18.21■□□□□ 0.51
DDB1-223ENST00000543658 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
DDB1-223ENST00000543658 FGD6Q6ZV73 1430 aa18.2■□□□□ 0.5
DDB1-223ENST00000543658 TEX14Q8IWB6 1497 aa18.19■□□□□ 0.5
DDB1-223ENST00000543658 PPRC1Q5VV67 1664 aaKnown RBP18.18■□□□□ 0.5
DDB1-223ENST00000543658 ZNF777Q9ULD5 760 aaPredicted RBP18.17■□□□□ 0.5
DDB1-223ENST00000543658 FANCAO15360 1455 aa18.17■□□□□ 0.5
DDB1-223ENST00000543658 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
DDB1-223ENST00000543658 SAMD9LQ8IVG5 1584 aa18.16■□□□□ 0.5
DDB1-223ENST00000543658 EFCAB2Q5VUJ9 269 aa18.15■□□□□ 0.5
DDB1-223ENST00000543658 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
DDB1-223ENST00000543658 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.5
DDB1-223ENST00000543658 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
DDB1-223ENST00000543658 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
DDB1-223ENST00000543658 NEO1Q92859 1461 aa18.13■□□□□ 0.49
DDB1-223ENST00000543658 ABCC1P33527 1531 aa18.12■□□□□ 0.49
DDB1-223ENST00000543658 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
DDB1-223ENST00000543658 ADGRL1O94910 1474 aa18.1■□□□□ 0.49
DDB1-223ENST00000543658 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
DDB1-223ENST00000543658 AKNAQ7Z591 1439 aa18.09■□□□□ 0.49
DDB1-223ENST00000543658 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
DDB1-223ENST00000543658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.07■□□□□ 0.485e-11■■□□□ 11.4
DDB1-223ENST00000543658 ARHGEF5Q12774 1597 aa18.07■□□□□ 0.48
DDB1-223ENST00000543658 TRIM26Q12899 539 aaPredicted RBP18.05■□□□□ 0.48
DDB1-223ENST00000543658 KIAA1107Q9UPP5 1409 aa18.05■□□□□ 0.48
DDB1-223ENST00000543658 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
DDB1-223ENST00000543658 ADGBQ8N7X0 1667 aa18.04■□□□□ 0.48
DDB1-223ENST00000543658 CCDC141Q6ZP82 1450 aa18.03■□□□□ 0.48
DDB1-223ENST00000543658 SCAPERQ9BY12 1400 aa18.03■□□□□ 0.48
DDB1-223ENST00000543658 RICTORQ6R327 1708 aa18.02■□□□□ 0.48
DDB1-223ENST00000543658 DENND4BO75064 1496 aaPredicted RBP18.01■□□□□ 0.47
DDB1-223ENST00000543658 DAPK1P53355 1430 aa18.01■□□□□ 0.47
DDB1-223ENST00000543658 ZNF518AQ6AHZ1 1483 aa18.01■□□□□ 0.47
DDB1-223ENST00000543658 ITGAEP38570 1179 aa18■□□□□ 0.47
DDB1-223ENST00000543658 HNRNPMP52272 730 aaKnown RBP eCLIP18■□□□□ 0.472e-7■■■■□ 25.2
DDB1-223ENST00000543658 RSPH4AQ5TD94 716 aa18■□□□□ 0.47
DDB1-223ENST00000543658 KDM6BO15054 1643 aa18■□□□□ 0.47
DDB1-223ENST00000543658 ARHGEF12Q9NZN5 1544 aa17.99■□□□□ 0.47
DDB1-223ENST00000543658 POGZQ7Z3K3 1410 aa17.98■□□□□ 0.47
DDB1-223ENST00000543658 MBD5Q9P267 1494 aa17.98■□□□□ 0.47
DDB1-223ENST00000543658 SHANK2Q9UPX8 1470 aa17.98■□□□□ 0.47
DDB1-223ENST00000543658 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
DDB1-223ENST00000543658 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
DDB1-223ENST00000543658 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.47
DDB1-223ENST00000543658 MAST1Q9Y2H9 1570 aa17.96■□□□□ 0.47
DDB1-223ENST00000543658 MYT1LQ9UL68 1186 aa17.96■□□□□ 0.47
DDB1-223ENST00000543658 TRAPPC8Q9Y2L5 1435 aa17.96■□□□□ 0.47
DDB1-223ENST00000543658 KDM5CP41229 1560 aa17.96■□□□□ 0.46
DDB1-223ENST00000543658 ABCC5O15440 1437 aa17.95■□□□□ 0.46
DDB1-223ENST00000543658 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
DDB1-223ENST00000543658 FRMPD1Q5SYB0 1578 aa17.94■□□□□ 0.46
DDB1-223ENST00000543658 INO80Q9ULG1 1556 aaPredicted RBP17.94■□□□□ 0.46
DDB1-223ENST00000543658 ATP7AQ04656 1500 aa17.93■□□□□ 0.46
DDB1-223ENST00000543658 SPAG9O60271 1321 aaKnown RBP17.92■□□□□ 0.46
DDB1-223ENST00000543658 ZMYM4Q5VZL5 1548 aa17.92■□□□□ 0.46
DDB1-223ENST00000543658 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
DDB1-223ENST00000543658 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
DDB1-223ENST00000543658 GCC2Q8IWJ2 1684 aa17.91■□□□□ 0.46
DDB1-223ENST00000543658 KIDINS220Q9ULH0 1771 aa17.91■□□□□ 0.46
DDB1-223ENST00000543658 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
DDB1-223ENST00000543658 CHIC2Q9UKJ5 165 aa17.9■□□□□ 0.46
DDB1-223ENST00000543658 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
DDB1-223ENST00000543658 RAPGEF3O95398 923 aa17.89■□□□□ 0.45
DDB1-223ENST00000543658 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.45
DDB1-223ENST00000543658 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
DDB1-223ENST00000543658 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
DDB1-223ENST00000543658 PTPRKQ15262 1439 aa17.87■□□□□ 0.45
DDB1-223ENST00000543658 MLH3Q9UHC1 1453 aa17.87■□□□□ 0.45
DDB1-223ENST00000543658 ROCK1Q13464 1354 aa17.86■□□□□ 0.45
DDB1-223ENST00000543658 MAGI2Q86UL8 1455 aa17.86■□□□□ 0.45
DDB1-223ENST00000543658 ABCA6Q8N139 1617 aa17.86■□□□□ 0.45
DDB1-223ENST00000543658 COL17A1Q9UMD9 1497 aaPredicted RBP17.85■□□□□ 0.45
DDB1-223ENST00000543658 ARHGEF40Q8TER5 1519 aa17.84■□□□□ 0.45
DDB1-223ENST00000543658 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.44
DDB1-223ENST00000543658 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
DDB1-223ENST00000543658 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
DDB1-223ENST00000543658 NCOA1Q15788 1441 aa17.81■□□□□ 0.44
DDB1-223ENST00000543658 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
DDB1-223ENST00000543658 HFM1A2PYH4 1435 aa17.81■□□□□ 0.44
DDB1-223ENST00000543658 EIF2AK4Q9P2K8 1649 aaKnown RBP17.79■□□□□ 0.44
DDB1-223ENST00000543658 A2MP01023 1474 aa17.77■□□□□ 0.44
DDB1-223ENST00000543658 YEATS2Q9ULM3 1422 aa17.77■□□□□ 0.44
DDB1-223ENST00000543658 NAIPQ13075 1403 aa17.76■□□□□ 0.43
DDB1-223ENST00000543658 ERBINQ96RT1 1412 aa17.76■□□□□ 0.43
DDB1-223ENST00000543658 SETD5Q9C0A6 1442 aa17.76■□□□□ 0.43
DDB1-223ENST00000543658 ATP10AO60312 1499 aa17.75■□□□□ 0.43
DDB1-223ENST00000543658 ANKRD50Q9ULJ7 1429 aa17.75■□□□□ 0.43
DDB1-223ENST00000543658 REREQ9P2R6 1566 aa17.74■□□□□ 0.43
DDB1-223ENST00000543658 BCORL1Q5H9F3 1711 aa17.72■□□□□ 0.43
DDB1-223ENST00000543658 DHX29Q7Z478 1369 aaKnown RBP17.72■□□□□ 0.43
DDB1-223ENST00000543658 RAB3GAP2Q9H2M9 1393 aa17.7■□□□□ 0.42
DDB1-223ENST00000543658 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
DDB1-223ENST00000543658 UNC13BO14795 1591 aa17.68■□□□□ 0.42
DDB1-223ENST00000543658 DEPDC5O75140 1603 aa17.68■□□□□ 0.42
DDB1-223ENST00000543658 RNF17Q9BXT8 1623 aaKnown RBP17.68■□□□□ 0.42
DDB1-223ENST00000543658 AGLP35573 1532 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms