RNA–Protein interactions for RNA: ENST00000543086.7

ERC1-213, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best) BASIC

Gene ERC1, Length 9,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-213ENST00000543086 RAPGEF6Q8TEU7 1601 aa12.39□□□□□ -0.43
ERC1-213ENST00000543086 SHANK2Q9UPX8 1470 aa12.39□□□□□ -0.43
ERC1-213ENST00000543086 FANCD2Q9BXW9 1451 aa12.39□□□□□ -0.43
ERC1-213ENST00000543086 CEP152O94986 1710 aa12.39□□□□□ -0.43
ERC1-213ENST00000543086 KDM5DQ9BY66 1539 aa12.34□□□□□ -0.43
ERC1-213ENST00000543086 ANP32AP39687 249 aaKnown RBP12.34□□□□□ -0.43
ERC1-213ENST00000543086 RTL5Q5HYW3 569 aaPredicted RBP12.34□□□□□ -0.43
ERC1-213ENST00000543086 SMG6Q86US8 1419 aaKnown RBP12.34□□□□□ -0.43
ERC1-213ENST00000543086 EPRSP07814 1512 aaKnown RBP12.34□□□□□ -0.43
ERC1-213ENST00000543086 TRPM1Q7Z4N2 1603 aa12.33□□□□□ -0.44
ERC1-213ENST00000543086 CEP170Q5SW79 1584 aa12.32□□□□□ -0.44
ERC1-213ENST00000543086 BCORL1Q5H9F3 1711 aa12.32□□□□□ -0.44
ERC1-213ENST00000543086 KIAA0556O60303 1618 aa12.31□□□□□ -0.44
ERC1-213ENST00000543086 ARHGEF5Q12774 1597 aa12.31□□□□□ -0.44
ERC1-213ENST00000543086 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
ERC1-213ENST00000543086 RNF17Q9BXT8 1623 aaKnown RBP12.31□□□□□ -0.44
ERC1-213ENST00000543086 MBD5Q9P267 1494 aa12.3□□□□□ -0.44
ERC1-213ENST00000543086 EIF4G2P78344 907 aaKnown RBP eCLIP12.3□□□□□ -0.44
ERC1-213ENST00000543086 SPATA31E1Q6ZUB1 1445 aa12.29□□□□□ -0.44
ERC1-213ENST00000543086 ADGRL2O95490 1459 aa12.29□□□□□ -0.44
ERC1-213ENST00000543086 SPHKAPQ2M3C7 1700 aa12.29□□□□□ -0.44
ERC1-213ENST00000543086 FHOD3Q2V2M9 1422 aa12.28□□□□□ -0.44
ERC1-213ENST00000543086 RALGAPBQ86X10 1494 aa12.28□□□□□ -0.44
ERC1-213ENST00000543086 DDX10Q13206 875 aaKnown RBP12.28□□□□□ -0.44
ERC1-213ENST00000543086 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
ERC1-213ENST00000543086 UNC13BO14795 1591 aa12.27□□□□□ -0.45
ERC1-213ENST00000543086 SHROOM2Q13796 1616 aa12.27□□□□□ -0.45
ERC1-213ENST00000543086 CFAP65Q6ZU64 1925 aaKnown RBP12.27□□□□□ -0.45
ERC1-213ENST00000543086 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
ERC1-213ENST00000543086 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
ERC1-213ENST00000543086 IQGAP1P46940 1657 aa12.25□□□□□ -0.45
ERC1-213ENST00000543086 EIF4G3O43432 1585 aaKnown RBP12.25□□□□□ -0.45
ERC1-213ENST00000543086 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
ERC1-213ENST00000543086 HNRNPUQ00839 825 aaKnown RBP eCLIP12.24□□□□□ -0.45
ERC1-213ENST00000543086 PREX2Q70Z35 1606 aa12.24□□□□□ -0.45
ERC1-213ENST00000543086 NOP58Q9Y2X3 529 aaKnown RBP12.24□□□□□ -0.45
ERC1-213ENST00000543086 IQGAP3Q86VI3 1631 aa12.24□□□□□ -0.45
ERC1-213ENST00000543086 FAM50AQ14320 339 aaKnown RBP12.24□□□□□ -0.45
ERC1-213ENST00000543086 CCDC7Q96M83 1385 aa12.23□□□□□ -0.45
ERC1-213ENST00000543086 PDS5BQ9NTI5 1447 aa12.22□□□□□ -0.45
ERC1-213ENST00000543086 RNF123Q5XPI4 1314 aa12.22□□□□□ -0.45
ERC1-213ENST00000543086 WASHC2AQ641Q2 1341 aa12.22□□□□□ -0.45
ERC1-213ENST00000543086 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
ERC1-213ENST00000543086 UHRF1BP1Q6BDS2 1440 aa12.22□□□□□ -0.45
ERC1-213ENST00000543086 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.45
ERC1-213ENST00000543086 MS4A1P11836 297 aa12.21□□□□□ -0.46
ERC1-213ENST00000543086 CLASP1Q7Z460 1538 aa12.2□□□□□ -0.46
ERC1-213ENST00000543086 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
ERC1-213ENST00000543086 ANKRD30BQ9BXX2 1392 aa12.18□□□□□ -0.46
ERC1-213ENST00000543086 PDE3BQ13370 1112 aa12.18□□□□□ -0.46
ERC1-213ENST00000543086 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
ERC1-213ENST00000543086 MAST1Q9Y2H9 1570 aa12.17□□□□□ -0.46
ERC1-213ENST00000543086 DAPK1P53355 1430 aa12.17□□□□□ -0.46
ERC1-213ENST00000543086 PRKRIP1Q9H875 184 aaPredicted RBP12.17□□□□□ -0.46
ERC1-213ENST00000543086 ANKRD26Q9UPS8 1709 aa12.17□□□□□ -0.46
ERC1-213ENST00000543086 KIF15Q9NS87 1388 aa12.16□□□□□ -0.46
ERC1-213ENST00000543086 SYNMO15061 1565 aa12.16□□□□□ -0.46
ERC1-213ENST00000543086 KDM6BO15054 1643 aa12.16□□□□□ -0.46
ERC1-213ENST00000543086 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
ERC1-213ENST00000543086 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
ERC1-213ENST00000543086 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.46
ERC1-213ENST00000543086 PRDM15P57071 1507 aaPredicted RBP12.15□□□□□ -0.46
ERC1-213ENST00000543086 ZMYM3Q14202 1370 aa12.15□□□□□ -0.46
ERC1-213ENST00000543086 IFT172Q9UG01 1749 aa12.15□□□□□ -0.47
ERC1-213ENST00000543086 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
ERC1-213ENST00000543086 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
ERC1-213ENST00000543086 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
ERC1-213ENST00000543086 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
ERC1-213ENST00000543086 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
ERC1-213ENST00000543086 C11orf95C9JLR9 678 aaPredicted RBP12.13□□□□□ -0.47
ERC1-213ENST00000543086 RALBP1Q15311 655 aa12.13□□□□□ -0.47
ERC1-213ENST00000543086 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
ERC1-213ENST00000543086 EIF3AQ14152 1382 aaKnown RBP12.12□□□□□ -0.47
ERC1-213ENST00000543086 URB2Q14146 1524 aaKnown RBP12.12□□□□□ -0.47
ERC1-213ENST00000543086 SCAPERQ9BY12 1400 aa12.12□□□□□ -0.47
ERC1-213ENST00000543086 CCDC141Q6ZP82 1450 aa12.12□□□□□ -0.47
ERC1-213ENST00000543086 NUP160Q12769 1436 aa12.12□□□□□ -0.47
ERC1-213ENST00000543086 USP47Q96K76 1375 aa12.11□□□□□ -0.47
ERC1-213ENST00000543086 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
ERC1-213ENST00000543086 MYOM1P52179 1685 aa12.11□□□□□ -0.47
ERC1-213ENST00000543086 MRS2Q9HD23 443 aa12.11□□□□□ -0.47
ERC1-213ENST00000543086 SLC24A1O60721 1099 aa12.11□□□□□ -0.47
ERC1-213ENST00000543086 KIAA0586Q9BVV6 1533 aa12.11□□□□□ -0.47
ERC1-213ENST00000543086 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
ERC1-213ENST00000543086 NINLQ9Y2I6 1382 aa12.1□□□□□ -0.47
ERC1-213ENST00000543086 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
ERC1-213ENST00000543086 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
ERC1-213ENST00000543086 ABCA8O94911 1581 aa12.1□□□□□ -0.47
ERC1-213ENST00000543086 USP32Q8NFA0 1604 aa12.1□□□□□ -0.47
ERC1-213ENST00000543086 ITGAEP38570 1179 aa12.1□□□□□ -0.47
ERC1-213ENST00000543086 DENND4BO75064 1496 aaPredicted RBP12.09□□□□□ -0.47
ERC1-213ENST00000543086 BCANQ96GW7 911 aa12.09□□□□□ -0.47
ERC1-213ENST00000543086 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
ERC1-213ENST00000543086 MYO3AQ8NEV4 1616 aa12.09□□□□□ -0.47
ERC1-213ENST00000543086 PTPRKQ15262 1439 aa12.08□□□□□ -0.47
ERC1-213ENST00000543086 CCDC136Q96JN2 1154 aa12.08□□□□□ -0.48
ERC1-213ENST00000543086 TET3O43151 1660 aa12.08□□□□□ -0.48
ERC1-213ENST00000543086 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
ERC1-213ENST00000543086 BLMP54132 1417 aaPredicted RBP12.08□□□□□ -0.48
ERC1-213ENST00000543086 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms