RNA–Protein interactions for RNA: ENST00000542988.1

AC005833.4-201, humanhuman

TSL 3 BASIC

Gene AC005833.4, Length 449 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005833.4-201ENST00000542988 COL17A1Q9UMD9 1497 aaPredicted RBP14.05□□□□□ -0.16
AC005833.4-201ENST00000542988 KCNH8Q96L42 1107 aa14.03□□□□□ -0.16
AC005833.4-201ENST00000542988 CDK13Q14004 1512 aaKnown RBP14.03□□□□□ -0.16
AC005833.4-201ENST00000542988 DSG3P32926 999 aa14.02□□□□□ -0.17
AC005833.4-201ENST00000542988 CLIP1P30622 1438 aa14.01□□□□□ -0.17
AC005833.4-201ENST00000542988 CASKIN1Q8WXD9 1431 aa14□□□□□ -0.17
AC005833.4-201ENST00000542988 PLEKHD1A6NEE1 506 aa14□□□□□ -0.17
AC005833.4-201ENST00000542988 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
AC005833.4-201ENST00000542988 PHLDB1Q86UU1 1377 aa13.99□□□□□ -0.17
AC005833.4-201ENST00000542988 PCF11O94913 1555 aaKnown RBP13.99□□□□□ -0.17
AC005833.4-201ENST00000542988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.98□□□□□ -0.17
AC005833.4-201ENST00000542988 NEO1Q92859 1461 aa13.98□□□□□ -0.17
AC005833.4-201ENST00000542988 FYCO1Q9BQS8 1478 aa13.98□□□□□ -0.17
AC005833.4-201ENST00000542988 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
AC005833.4-201ENST00000542988 CCDC18Q5T9S5 1454 aa13.96□□□□□ -0.17
AC005833.4-201ENST00000542988 TTC37Q6PGP7 1564 aa13.95□□□□□ -0.18
AC005833.4-201ENST00000542988 TROQ12816 1431 aaPredicted RBP13.94□□□□□ -0.18
AC005833.4-201ENST00000542988 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
AC005833.4-201ENST00000542988 CDK11AQ9UQ88 783 aaPredicted RBP13.93□□□□□ -0.18
AC005833.4-201ENST00000542988 CFAP74Q9C0B2 1584 aa13.92□□□□□ -0.18
AC005833.4-201ENST00000542988 KIF14Q15058 1648 aa13.9□□□□□ -0.18
AC005833.4-201ENST00000542988 FANCAO15360 1455 aa13.9□□□□□ -0.18
AC005833.4-201ENST00000542988 PLCH2O75038 1416 aa13.9□□□□□ -0.19
AC005833.4-201ENST00000542988 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
AC005833.4-201ENST00000542988 FRMPD1Q5SYB0 1578 aa13.88□□□□□ -0.19
AC005833.4-201ENST00000542988 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
AC005833.4-201ENST00000542988 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
AC005833.4-201ENST00000542988 AKNAQ7Z591 1439 aa13.87□□□□□ -0.19
AC005833.4-201ENST00000542988 MYO5CQ9NQX4 1742 aa13.87□□□□□ -0.19
AC005833.4-201ENST00000542988 RICTORQ6R327 1708 aa13.85□□□□□ -0.19
AC005833.4-201ENST00000542988 ABCB7O75027 752 aa13.84□□□□□ -0.19
AC005833.4-201ENST00000542988 DENND4BO75064 1496 aaPredicted RBP13.84□□□□□ -0.19
AC005833.4-201ENST00000542988 ZMYM4Q5VZL5 1548 aa13.84□□□□□ -0.19
AC005833.4-201ENST00000542988 KDM4FA0A1W2PPD8 638 aa13.83□□□□□ -0.2
AC005833.4-201ENST00000542988 LOC105371045A0A1W2PR82 267 aa13.83□□□□□ -0.2
AC005833.4-201ENST00000542988 RAPGEF3O95398 923 aa13.82□□□□□ -0.2
AC005833.4-201ENST00000542988 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
AC005833.4-201ENST00000542988 ADGRL1O94910 1474 aa13.81□□□□□ -0.2
AC005833.4-201ENST00000542988 POGZQ7Z3K3 1410 aa13.81□□□□□ -0.2
AC005833.4-201ENST00000542988 EFCAB2Q5VUJ9 269 aa13.8□□□□□ -0.2
AC005833.4-201ENST00000542988 CDC42BPBQ9Y5S2 1711 aa13.8□□□□□ -0.2
AC005833.4-201ENST00000542988 ARHGEF40Q8TER5 1519 aa13.8□□□□□ -0.2
AC005833.4-201ENST00000542988 VPS8Q8N3P4 1428 aa13.79□□□□□ -0.2
AC005833.4-201ENST00000542988 MAGI2Q86UL8 1455 aa13.79□□□□□ -0.2
AC005833.4-201ENST00000542988 ARHGAP5Q13017 1502 aa13.79□□□□□ -0.2
AC005833.4-201ENST00000542988 CDC42BPAQ5VT25 1732 aa13.78□□□□□ -0.2
AC005833.4-201ENST00000542988 SCAPERQ9BY12 1400 aa13.78□□□□□ -0.2
AC005833.4-201ENST00000542988 EHBP1L1Q8N3D4 1523 aa13.77□□□□□ -0.21
AC005833.4-201ENST00000542988 KDM5CP41229 1560 aa13.76□□□□□ -0.21
AC005833.4-201ENST00000542988 GPATCH8Q9UKJ3 1502 aaKnown RBP13.76□□□□□ -0.21
AC005833.4-201ENST00000542988 ABCC1P33527 1531 aa13.75□□□□□ -0.21
AC005833.4-201ENST00000542988 MTUS2Q5JR59 1369 aa13.75□□□□□ -0.21
AC005833.4-201ENST00000542988 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
AC005833.4-201ENST00000542988 POLA2Q14181 598 aa13.74□□□□□ -0.21
AC005833.4-201ENST00000542988 TIAM1Q13009 1591 aa13.74□□□□□ -0.21
AC005833.4-201ENST00000542988 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
AC005833.4-201ENST00000542988 ZFYVE16Q7Z3T8 1539 aa13.74□□□□□ -0.21
AC005833.4-201ENST00000542988 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
AC005833.4-201ENST00000542988 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
AC005833.4-201ENST00000542988 ADAMTSL3P82987 1691 aa13.71□□□□□ -0.21
AC005833.4-201ENST00000542988 ITSN2Q9NZM3 1697 aa13.71□□□□□ -0.21
AC005833.4-201ENST00000542988 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.22
AC005833.4-201ENST00000542988 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
AC005833.4-201ENST00000542988 KIAA1107Q9UPP5 1409 aa13.7□□□□□ -0.22
AC005833.4-201ENST00000542988 HECW2Q9P2P5 1572 aa13.69□□□□□ -0.22
AC005833.4-201ENST00000542988 BCORL1Q5H9F3 1711 aa13.69□□□□□ -0.22
AC005833.4-201ENST00000542988 CCNB3Q8WWL7 1395 aa13.69□□□□□ -0.22
AC005833.4-201ENST00000542988 PLEKHH2Q8IVE3 1493 aa13.68□□□□□ -0.22
AC005833.4-201ENST00000542988 SIGLEC1Q9BZZ2 1709 aa13.68□□□□□ -0.22
AC005833.4-201ENST00000542988 REREQ9P2R6 1566 aa13.68□□□□□ -0.22
AC005833.4-201ENST00000542988 TRAPPC8Q9Y2L5 1435 aa13.68□□□□□ -0.22
AC005833.4-201ENST00000542988 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
AC005833.4-201ENST00000542988 SUPT6HQ7KZ85 1726 aaKnown RBP13.67□□□□□ -0.22
AC005833.4-201ENST00000542988 ATP10AO60312 1499 aa13.67□□□□□ -0.22
AC005833.4-201ENST00000542988 NCOA2Q15596 1464 aa13.67□□□□□ -0.22
AC005833.4-201ENST00000542988 C9orf84Q5VXU9 1444 aa13.66□□□□□ -0.22
AC005833.4-201ENST00000542988 AFAP1Q8N556 730 aa13.66□□□□□ -0.22
AC005833.4-201ENST00000542988 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
AC005833.4-201ENST00000542988 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
AC005833.4-201ENST00000542988 CFDP1Q9UEE9 299 aaPredicted RBP13.65□□□□□ -0.22
AC005833.4-201ENST00000542988 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
AC005833.4-201ENST00000542988 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
AC005833.4-201ENST00000542988 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
AC005833.4-201ENST00000542988 MADDQ8WXG6 1647 aa13.62□□□□□ -0.23
AC005833.4-201ENST00000542988 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
AC005833.4-201ENST00000542988 PTPRMP28827 1452 aa13.61□□□□□ -0.23
AC005833.4-201ENST00000542988 AGLP35573 1532 aa13.61□□□□□ -0.23
AC005833.4-201ENST00000542988 KANK4Q5T7N3 995 aaPredicted RBP13.59□□□□□ -0.23
AC005833.4-201ENST00000542988 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
AC005833.4-201ENST00000542988 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
AC005833.4-201ENST00000542988 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
AC005833.4-201ENST00000542988 ZNF644Q9H582 1327 aaPredicted RBP13.58□□□□□ -0.24
AC005833.4-201ENST00000542988 CAMSAP2Q08AD1 1489 aa13.57□□□□□ -0.24
AC005833.4-201ENST00000542988 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.24
AC005833.4-201ENST00000542988 SPAG9O60271 1321 aaKnown RBP13.57□□□□□ -0.24
AC005833.4-201ENST00000542988 MIA2Q96PC5 1412 aa13.56□□□□□ -0.24
AC005833.4-201ENST00000542988 PLXNC1O60486 1568 aa13.56□□□□□ -0.24
AC005833.4-201ENST00000542988 ARHGEF5Q12774 1597 aa13.56□□□□□ -0.24
AC005833.4-201ENST00000542988 RIMS1Q86UR5 1692 aaKnown RBP13.56□□□□□ -0.24
AC005833.4-201ENST00000542988 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms