RNA–Protein interactions for RNA: ENST00000542988.1

AC005833.4-201, humanhuman

TSL 3 BASIC

Gene AC005833.4, Length 449 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005833.4-201ENST00000542988 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
AC005833.4-201ENST00000542988 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
AC005833.4-201ENST00000542988 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
AC005833.4-201ENST00000542988 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
AC005833.4-201ENST00000542988 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
AC005833.4-201ENST00000542988 CCDC180Q9P1Z9 1646 aa18.96■□□□□ 0.63
AC005833.4-201ENST00000542988 FOXD1Q16676 465 aa18.68■□□□□ 0.58
AC005833.4-201ENST00000542988 ABCC9O60706 1549 aa18.54■□□□□ 0.56
AC005833.4-201ENST00000542988 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
AC005833.4-201ENST00000542988 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
AC005833.4-201ENST00000542988 NACADO15069 1562 aa17.84■□□□□ 0.45
AC005833.4-201ENST00000542988 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.43
AC005833.4-201ENST00000542988 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
AC005833.4-201ENST00000542988 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
AC005833.4-201ENST00000542988 ADRA2BP18089 450 aa17.68■□□□□ 0.42
AC005833.4-201ENST00000542988 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
AC005833.4-201ENST00000542988 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
AC005833.4-201ENST00000542988 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
AC005833.4-201ENST00000542988 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
AC005833.4-201ENST00000542988 MSH5O43196 834 aa17.38■□□□□ 0.37
AC005833.4-201ENST00000542988 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
AC005833.4-201ENST00000542988 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
AC005833.4-201ENST00000542988 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
AC005833.4-201ENST00000542988 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
AC005833.4-201ENST00000542988 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
AC005833.4-201ENST00000542988 EIF4G1Q04637 1599 aaKnown RBP16.87■□□□□ 0.29
AC005833.4-201ENST00000542988 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
AC005833.4-201ENST00000542988 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
AC005833.4-201ENST00000542988 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
AC005833.4-201ENST00000542988 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
AC005833.4-201ENST00000542988 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
AC005833.4-201ENST00000542988 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
AC005833.4-201ENST00000542988 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
AC005833.4-201ENST00000542988 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
AC005833.4-201ENST00000542988 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
AC005833.4-201ENST00000542988 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
AC005833.4-201ENST00000542988 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
AC005833.4-201ENST00000542988 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
AC005833.4-201ENST00000542988 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
AC005833.4-201ENST00000542988 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
AC005833.4-201ENST00000542988 WIZO95785 1651 aa16.14■□□□□ 0.17
AC005833.4-201ENST00000542988 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
AC005833.4-201ENST00000542988 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
AC005833.4-201ENST00000542988 NESP48681 1621 aa16.03■□□□□ 0.16
AC005833.4-201ENST00000542988 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
AC005833.4-201ENST00000542988 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
AC005833.4-201ENST00000542988 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
AC005833.4-201ENST00000542988 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
AC005833.4-201ENST00000542988 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
AC005833.4-201ENST00000542988 CUX2O14529 1486 aa15.93■□□□□ 0.14
AC005833.4-201ENST00000542988 PDS5BQ9NTI5 1447 aa15.9■□□□□ 0.14
AC005833.4-201ENST00000542988 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
AC005833.4-201ENST00000542988 CFTRP13569 1480 aa15.86■□□□□ 0.13
AC005833.4-201ENST00000542988 KIF21AQ7Z4S6 1674 aa15.84■□□□□ 0.13
AC005833.4-201ENST00000542988 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
AC005833.4-201ENST00000542988 CCDC88BA6NC98 1476 aa15.79■□□□□ 0.12
AC005833.4-201ENST00000542988 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
AC005833.4-201ENST00000542988 MRC2Q9UBG0 1479 aa15.75■□□□□ 0.11
AC005833.4-201ENST00000542988 CEP164Q9UPV0 1460 aa15.74■□□□□ 0.11
AC005833.4-201ENST00000542988 WDR62O43379 1518 aa15.73■□□□□ 0.11
AC005833.4-201ENST00000542988 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
AC005833.4-201ENST00000542988 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
AC005833.4-201ENST00000542988 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
AC005833.4-201ENST00000542988 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
AC005833.4-201ENST00000542988 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
AC005833.4-201ENST00000542988 DNAJC5Q9H3Z4 198 aa15.52■□□□□ 0.08
AC005833.4-201ENST00000542988 ABCC8Q09428 1581 aa15.51■□□□□ 0.07
AC005833.4-201ENST00000542988 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
AC005833.4-201ENST00000542988 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
AC005833.4-201ENST00000542988 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
AC005833.4-201ENST00000542988 KCNA4P22459 653 aa15.43■□□□□ 0.06
AC005833.4-201ENST00000542988 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
AC005833.4-201ENST00000542988 NPM3O75607 178 aaKnown RBP15.42■□□□□ 0.06
AC005833.4-201ENST00000542988 TARBP1Q13395 1621 aaKnown RBP15.36■□□□□ 0.05
AC005833.4-201ENST00000542988 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
AC005833.4-201ENST00000542988 CUX1P39880 1505 aa15.35■□□□□ 0.05
AC005833.4-201ENST00000542988 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
AC005833.4-201ENST00000542988 EIF4G3O43432 1585 aaKnown RBP15.29■□□□□ 0.04
AC005833.4-201ENST00000542988 FGD5Q6ZNL6 1462 aa15.29■□□□□ 0.04
AC005833.4-201ENST00000542988 WDR97A6NE52 1622 aa15.27■□□□□ 0.03
AC005833.4-201ENST00000542988 SOGA1O94964 1423 aa15.26■□□□□ 0.03
AC005833.4-201ENST00000542988 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
AC005833.4-201ENST00000542988 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
AC005833.4-201ENST00000542988 AQRO60306 1485 aaKnown RBP eCLIP15.22■□□□□ 0.03
AC005833.4-201ENST00000542988 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.02
AC005833.4-201ENST00000542988 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
AC005833.4-201ENST00000542988 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
AC005833.4-201ENST00000542988 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
AC005833.4-201ENST00000542988 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
AC005833.4-201ENST00000542988 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
AC005833.4-201ENST00000542988 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
AC005833.4-201ENST00000542988 ABCA5Q8WWZ7 1642 aa15.13■□□□□ 0.01
AC005833.4-201ENST00000542988 GRIN2BQ13224 1484 aa15.13■□□□□ 0.01
AC005833.4-201ENST00000542988 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
AC005833.4-201ENST00000542988 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
AC005833.4-201ENST00000542988 CHD1O14646 1710 aa15.09■□□□□ 0.01
AC005833.4-201ENST00000542988 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
AC005833.4-201ENST00000542988 PBRM1Q86U86 1689 aa15.07■□□□□ 0
AC005833.4-201ENST00000542988 SYNJ2O15056 1496 aa15.05■□□□□ -0
AC005833.4-201ENST00000542988 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms