RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 L3MBTL2Q969R5 705 aa22.74■■□□□ 1.23
PDCD2-208ENST00000541970 EIF5BO60841 1220 aaKnown RBP22.73■■□□□ 1.23
PDCD2-208ENST00000541970 MAP3K1Q13233 1512 aa22.73■■□□□ 1.23
PDCD2-208ENST00000541970 HSPA5P11021 654 aaKnown RBP22.72■■□□□ 1.23
PDCD2-208ENST00000541970 SNAPC4Q5SXM2 1469 aa22.72■■□□□ 1.23
PDCD2-208ENST00000541970 LAS1LQ9Y4W2 734 aaKnown RBP22.7■■□□□ 1.22
PDCD2-208ENST00000541970 EIF4G2P78344 907 aaKnown RBP eCLIP22.69■■□□□ 1.22
PDCD2-208ENST00000541970 CTTNBP2Q8WZ74 1663 aa22.69■■□□□ 1.22
PDCD2-208ENST00000541970 NAIPQ13075 1403 aa22.68■■□□□ 1.22
PDCD2-208ENST00000541970 CCDC184Q52MB2 194 aa22.66■■□□□ 1.22
PDCD2-208ENST00000541970 TSPY4P0CV99 314 aa22.65■■□□□ 1.22
PDCD2-208ENST00000541970 TSPY10P0CW01 314 aa22.65■■□□□ 1.22
PDCD2-208ENST00000541970 EPRSP07814 1512 aaKnown RBP22.65■■□□□ 1.22
PDCD2-208ENST00000541970 MRS2Q9HD23 443 aa22.64■■□□□ 1.22
PDCD2-208ENST00000541970 PRG4Q92954 1404 aaPredicted RBP22.64■■□□□ 1.21
PDCD2-208ENST00000541970 UACAQ9BZF9 1416 aa22.64■■□□□ 1.21
PDCD2-208ENST00000541970 HNRNPMP52272 730 aaKnown RBP eCLIP22.64■■□□□ 1.21
PDCD2-208ENST00000541970 TIMELESSQ9UNS1 1208 aa22.64■■□□□ 1.21
PDCD2-208ENST00000541970 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
PDCD2-208ENST00000541970 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
PDCD2-208ENST00000541970 HFM1A2PYH4 1435 aa22.62■■□□□ 1.21
PDCD2-208ENST00000541970 CFAP43Q8NDM7 1665 aa22.62■■□□□ 1.21
PDCD2-208ENST00000541970 RGL3Q3MIN7 710 aa22.61■■□□□ 1.21
PDCD2-208ENST00000541970 ERICH6BQ5W0A0 696 aa22.61■■□□□ 1.21
PDCD2-208ENST00000541970 IPO9Q96P70 1041 aaKnown RBP22.61■■□□□ 1.21
PDCD2-208ENST00000541970 PKD2Q13563 968 aa22.6■■□□□ 1.21
PDCD2-208ENST00000541970 NEFMP07197 916 aa22.58■■□□□ 1.2
PDCD2-208ENST00000541970 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
PDCD2-208ENST00000541970 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
PDCD2-208ENST00000541970 PLB1Q6P1J6 1458 aa22.57■■□□□ 1.2
PDCD2-208ENST00000541970 THOC2Q8NI27 1593 aaKnown RBP22.57■■□□□ 1.2
PDCD2-208ENST00000541970 SUPT6HQ7KZ85 1726 aaKnown RBP22.56■■□□□ 1.2
PDCD2-208ENST00000541970 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
PDCD2-208ENST00000541970 TARBP1Q13395 1621 aaKnown RBP22.54■■□□□ 1.2
PDCD2-208ENST00000541970 PTPN23Q9H3S7 1636 aa22.54■■□□□ 1.2
PDCD2-208ENST00000541970 CARMIL2Q6F5E8 1435 aa22.51■■□□□ 1.19
PDCD2-208ENST00000541970 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
PDCD2-208ENST00000541970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.49■■□□□ 1.19
PDCD2-208ENST00000541970 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
PDCD2-208ENST00000541970 KIAA0586Q9BVV6 1533 aa22.48■■□□□ 1.19
PDCD2-208ENST00000541970 HECW1Q76N89 1606 aa22.48■■□□□ 1.19
PDCD2-208ENST00000541970 WASHC2AQ641Q2 1341 aa22.47■■□□□ 1.19
PDCD2-208ENST00000541970 SAMD9Q5K651 1589 aa22.46■■□□□ 1.19
PDCD2-208ENST00000541970 NUP155O75694 1391 aa22.45■■□□□ 1.19
PDCD2-208ENST00000541970 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
PDCD2-208ENST00000541970 C11orf95C9JLR9 678 aaPredicted RBP22.44■■□□□ 1.18
PDCD2-208ENST00000541970 DCAF11Q8TEB1 546 aa22.44■■□□□ 1.18
PDCD2-208ENST00000541970 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
PDCD2-208ENST00000541970 UGGT2Q9NYU1 1516 aa22.43■■□□□ 1.18
PDCD2-208ENST00000541970 BRPF3Q9ULD4 1205 aa22.41■■□□□ 1.18
PDCD2-208ENST00000541970 DAPK1P53355 1430 aa22.4■■□□□ 1.18
PDCD2-208ENST00000541970 CARD11Q9BXL7 1154 aa22.4■■□□□ 1.18
PDCD2-208ENST00000541970 NUP153P49790 1475 aaKnown RBP22.4■■□□□ 1.18
PDCD2-208ENST00000541970 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
PDCD2-208ENST00000541970 ABCC5O15440 1437 aa22.39■■□□□ 1.17
PDCD2-208ENST00000541970 AKNAQ7Z591 1439 aa22.39■■□□□ 1.17
PDCD2-208ENST00000541970 PTPRGP23470 1445 aa22.38■■□□□ 1.17
PDCD2-208ENST00000541970 LRRIQ1Q96JM4 1722 aa22.37■■□□□ 1.17
PDCD2-208ENST00000541970 DISP1Q96F81 1524 aa22.37■■□□□ 1.17
PDCD2-208ENST00000541970 ANKRD30AQ9BXX3 1397 aa22.35■■□□□ 1.17
PDCD2-208ENST00000541970 ZBED9Q6R2W3 1325 aa22.35■■□□□ 1.17
PDCD2-208ENST00000541970 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
PDCD2-208ENST00000541970 PRKRIP1Q9H875 184 aaPredicted RBP22.34■■□□□ 1.17
PDCD2-208ENST00000541970 KDM6BO15054 1643 aa22.34■■□□□ 1.17
PDCD2-208ENST00000541970 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
PDCD2-208ENST00000541970 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.17
PDCD2-208ENST00000541970 WDR62O43379 1518 aa22.33■■□□□ 1.16
PDCD2-208ENST00000541970 SYNJ2O15056 1496 aa22.3■■□□□ 1.16
PDCD2-208ENST00000541970 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
PDCD2-208ENST00000541970 KIAA0556O60303 1618 aa22.27■■□□□ 1.16
PDCD2-208ENST00000541970 UBE2Q2Q8WVN8 375 aa22.27■■□□□ 1.16
PDCD2-208ENST00000541970 DAXXQ9UER7 740 aaPredicted RBP22.26■■□□□ 1.15
PDCD2-208ENST00000541970 KIF7Q2M1P5 1343 aa22.25■■□□□ 1.15
PDCD2-208ENST00000541970 ANKRD50Q9ULJ7 1429 aa22.25■■□□□ 1.15
PDCD2-208ENST00000541970 TMC1Q8TDI8 760 aa22.24■■□□□ 1.15
PDCD2-208ENST00000541970 ANKRD30BQ9BXX2 1392 aa22.24■■□□□ 1.15
PDCD2-208ENST00000541970 CAMSAP2Q08AD1 1489 aa22.24■■□□□ 1.15
PDCD2-208ENST00000541970 SLC4A3P48751 1232 aa22.24■■□□□ 1.15
PDCD2-208ENST00000541970 ST20-MTHFSA0A0A6YYL1 179 aa22.23■■□□□ 1.15
PDCD2-208ENST00000541970 NUDCQ9Y266 331 aa22.22■■□□□ 1.15
PDCD2-208ENST00000541970 RAPGEF6Q8TEU7 1601 aa22.22■■□□□ 1.15
PDCD2-208ENST00000541970 MAGI1Q96QZ7 1491 aaPredicted RBP22.21■■□□□ 1.15
PDCD2-208ENST00000541970 KIF15Q9NS87 1388 aa22.21■■□□□ 1.15
PDCD2-208ENST00000541970 GPATCH8Q9UKJ3 1502 aaKnown RBP22.2■■□□□ 1.15
PDCD2-208ENST00000541970 CHGAP10645 457 aaKnown RBP22.2■■□□□ 1.14
PDCD2-208ENST00000541970 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
PDCD2-208ENST00000541970 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
PDCD2-208ENST00000541970 NCOA1Q15788 1441 aa22.19■■□□□ 1.14
PDCD2-208ENST00000541970 PDE4AP27815 886 aa22.19■■□□□ 1.14
PDCD2-208ENST00000541970 CEP170Q5SW79 1584 aa22.18■■□□□ 1.14
PDCD2-208ENST00000541970 TCOF1Q13428 1488 aaKnown RBP22.18■■□□□ 1.14
PDCD2-208ENST00000541970 USP47Q96K76 1375 aa22.17■■□□□ 1.14
PDCD2-208ENST00000541970 SKAP1Q86WV1 359 aa22.16■■□□□ 1.14
PDCD2-208ENST00000541970 CNTLNQ9NXG0 1405 aa22.16■■□□□ 1.14
PDCD2-208ENST00000541970 EXOC6Q8TAG9 804 aa22.15■■□□□ 1.14
PDCD2-208ENST00000541970 GSE1Q14687 1217 aa22.15■■□□□ 1.14
PDCD2-208ENST00000541970 ATP10BO94823 1461 aa22.14■■□□□ 1.14
PDCD2-208ENST00000541970 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.14
PDCD2-208ENST00000541970 KIF14Q15058 1648 aa22.14■■□□□ 1.13
PDCD2-208ENST00000541970 CC2D1BQ5T0F9 858 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms