RNA–Protein interactions for RNA: ENST00000541938.1

SAMD1-203, Transcript of sterile alpha motif domain containing 1, humanhuman

TSL 3

Gene SAMD1, Length 143 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-203ENST00000541938 MTUS2Q5JR59 1369 aa30.83■■■□□ 2.53
SAMD1-203ENST00000541938 POGZQ7Z3K3 1410 aa30.8■■■□□ 2.52
SAMD1-203ENST00000541938 CDC42BPBQ9Y5S2 1711 aa30.78■■■□□ 2.52
SAMD1-203ENST00000541938 VPS8Q8N3P4 1428 aa30.78■■■□□ 2.52
SAMD1-203ENST00000541938 PREX2Q70Z35 1606 aa30.76■■■□□ 2.51
SAMD1-203ENST00000541938 ZMYM4Q5VZL5 1548 aa30.75■■■□□ 2.51
SAMD1-203ENST00000541938 AFAP1Q8N556 730 aa30.74■■■□□ 2.51
SAMD1-203ENST00000541938 ARID4BQ4LE39 1312 aaPredicted RBP30.73■■■□□ 2.51
SAMD1-203ENST00000541938 GPATCH8Q9UKJ3 1502 aaKnown RBP30.73■■■□□ 2.51
SAMD1-203ENST00000541938 YEATS2Q9ULM3 1422 aa30.73■■■□□ 2.51
SAMD1-203ENST00000541938 MAGI2Q86UL8 1455 aa30.72■■■□□ 2.51
SAMD1-203ENST00000541938 ZNF777Q9ULD5 760 aaPredicted RBP30.72■■■□□ 2.51
SAMD1-203ENST00000541938 ARHGEF40Q8TER5 1519 aa30.72■■■□□ 2.51
SAMD1-203ENST00000541938 CCNB3Q8WWL7 1395 aa30.71■■■□□ 2.51
SAMD1-203ENST00000541938 CDC42BPAQ5VT25 1732 aa30.71■■■□□ 2.51
SAMD1-203ENST00000541938 ZFYVE16Q7Z3T8 1539 aa30.7■■■□□ 2.51
SAMD1-203ENST00000541938 EHBP1L1Q8N3D4 1523 aa30.69■■■□□ 2.5
SAMD1-203ENST00000541938 CFDP1Q9UEE9 299 aaPredicted RBP30.68■■■□□ 2.5
SAMD1-203ENST00000541938 ZNF518AQ6AHZ1 1483 aa30.68■■■□□ 2.5
SAMD1-203ENST00000541938 ARHGEF12Q9NZN5 1544 aa30.68■■■□□ 2.5
SAMD1-203ENST00000541938 MYT1LQ9UL68 1186 aa30.65■■■□□ 2.5
SAMD1-203ENST00000541938 TRAPPC8Q9Y2L5 1435 aa30.64■■■□□ 2.5
SAMD1-203ENST00000541938 ABCC1P33527 1531 aa30.64■■■□□ 2.5
SAMD1-203ENST00000541938 TIAM1Q13009 1591 aa30.62■■■□□ 2.49
SAMD1-203ENST00000541938 KDM5CP41229 1560 aa30.6■■■□□ 2.49
SAMD1-203ENST00000541938 HNRNPMP52272 730 aaKnown RBP eCLIP30.6■■■□□ 2.49
SAMD1-203ENST00000541938 ATP10AO60312 1499 aa30.59■■■□□ 2.49
SAMD1-203ENST00000541938 SAMD9LQ8IVG5 1584 aa30.58■■■□□ 2.49
SAMD1-203ENST00000541938 ITSN2Q9NZM3 1697 aa30.57■■■□□ 2.48
SAMD1-203ENST00000541938 NCOA2Q15596 1464 aa30.56■■■□□ 2.48
SAMD1-203ENST00000541938 ADAMTSL3P82987 1691 aa30.55■■■□□ 2.48
SAMD1-203ENST00000541938 BCORL1Q5H9F3 1711 aa30.55■■■□□ 2.48
SAMD1-203ENST00000541938 KANK4Q5T7N3 995 aaPredicted RBP30.54■■■□□ 2.48
SAMD1-203ENST00000541938 LRRC9Q6ZRR7 1453 aa30.54■■■□□ 2.48
SAMD1-203ENST00000541938 MLH3Q9UHC1 1453 aa30.54■■■□□ 2.48
SAMD1-203ENST00000541938 ZNF644Q9H582 1327 aaPredicted RBP30.53■■■□□ 2.48
SAMD1-203ENST00000541938 C9orf84Q5VXU9 1444 aa30.53■■■□□ 2.48
SAMD1-203ENST00000541938 KIAA1107Q9UPP5 1409 aa30.53■■■□□ 2.48
SAMD1-203ENST00000541938 PLEKHH2Q8IVE3 1493 aa30.52■■■□□ 2.48
SAMD1-203ENST00000541938 MLECQ14165 292 aa30.52■■■□□ 2.48
SAMD1-203ENST00000541938 SUPT6HQ7KZ85 1726 aaKnown RBP30.52■■■□□ 2.48
SAMD1-203ENST00000541938 MAP3K1Q13233 1512 aa30.52■■■□□ 2.48
SAMD1-203ENST00000541938 SYCP2Q9BX26 1530 aa30.52■■■□□ 2.48
SAMD1-203ENST00000541938 HECW2Q9P2P5 1572 aa30.51■■■□□ 2.47
SAMD1-203ENST00000541938 SIGLEC1Q9BZZ2 1709 aa30.5■■■□□ 2.47
SAMD1-203ENST00000541938 APLP2Q06481 763 aa30.48■■■□□ 2.47
SAMD1-203ENST00000541938 SPAG9O60271 1321 aaKnown RBP30.47■■■□□ 2.47
SAMD1-203ENST00000541938 PTPRMP28827 1452 aa30.46■■■□□ 2.47
SAMD1-203ENST00000541938 DIP2CQ9Y2E4 1556 aa30.45■■■□□ 2.47
SAMD1-203ENST00000541938 MADDQ8WXG6 1647 aa30.44■■■□□ 2.46
SAMD1-203ENST00000541938 ABCA6Q8N139 1617 aa30.42■■■□□ 2.46
SAMD1-203ENST00000541938 KIDINS220Q9ULH0 1771 aa30.41■■■□□ 2.46
SAMD1-203ENST00000541938 MBD5Q9P267 1494 aa30.38■■■□□ 2.45
SAMD1-203ENST00000541938 REREQ9P2R6 1566 aa30.37■■■□□ 2.45
SAMD1-203ENST00000541938 RIMS1Q86UR5 1692 aaKnown RBP30.35■■■□□ 2.45
SAMD1-203ENST00000541938 PLPPR3Q6T4P5 718 aa30.34■■■□□ 2.45
SAMD1-203ENST00000541938 CAMSAP2Q08AD1 1489 aa30.33■■■□□ 2.45
SAMD1-203ENST00000541938 ATP7AQ04656 1500 aa30.32■■■□□ 2.44
SAMD1-203ENST00000541938 RSPH4AQ5TD94 716 aa30.31■■■□□ 2.44
SAMD1-203ENST00000541938 AGLP35573 1532 aa30.31■■■□□ 2.44
SAMD1-203ENST00000541938 INO80Q9ULG1 1556 aaPredicted RBP30.28■■■□□ 2.44
SAMD1-203ENST00000541938 MYOM3Q5VTT5 1437 aa30.27■■■□□ 2.44
SAMD1-203ENST00000541938 FER1L4A9Z1Z3 1794 aa30.26■■■□□ 2.43
SAMD1-203ENST00000541938 CCDC141Q6ZP82 1450 aa30.25■■■□□ 2.43
SAMD1-203ENST00000541938 RTEL1-TNFRSF6BF6WH68 1400 aa30.24■■■□□ 2.43
SAMD1-203ENST00000541938 MIA2Q96PC5 1412 aa30.24■■■□□ 2.43
SAMD1-203ENST00000541938 A2MP01023 1474 aa30.23■■■□□ 2.43
SAMD1-203ENST00000541938 TSPY4P0CV99 314 aa30.21■■■□□ 2.43
SAMD1-203ENST00000541938 TSPY10P0CW01 314 aa30.21■■■□□ 2.43
SAMD1-203ENST00000541938 CEBPAP49715 358 aaPredicted RBP30.21■■■□□ 2.43
SAMD1-203ENST00000541938 ESF1Q9H501 851 aaKnown RBP30.2■■■□□ 2.43
SAMD1-203ENST00000541938 ARHGEF5Q12774 1597 aa30.18■■■□□ 2.42
SAMD1-203ENST00000541938 PLXNC1O60486 1568 aa30.14■■■□□ 2.42
SAMD1-203ENST00000541938 DHX29Q7Z478 1369 aaKnown RBP30.14■■■□□ 2.41
SAMD1-203ENST00000541938 GGT6Q6P531 493 aa30.13■■■□□ 2.41
SAMD1-203ENST00000541938 ADGBQ8N7X0 1667 aa30.12■■■□□ 2.41
SAMD1-203ENST00000541938 LMTK3Q96Q04 1460 aa30.07■■■□□ 2.4
SAMD1-203ENST00000541938 FGD6Q6ZV73 1430 aa30.07■■■□□ 2.4
SAMD1-203ENST00000541938 CNTLNQ9NXG0 1405 aa30.07■■■□□ 2.4
SAMD1-203ENST00000541938 PTPN23Q9H3S7 1636 aa30.05■■■□□ 2.4
SAMD1-203ENST00000541938 KIF3BO15066 747 aa30.05■■■□□ 2.4
SAMD1-203ENST00000541938 HSPA2P54652 639 aa30.02■■■□□ 2.4
SAMD1-203ENST00000541938 PPP6R1Q9UPN7 881 aa30.02■■■□□ 2.4
SAMD1-203ENST00000541938 MAST1Q9Y2H9 1570 aa30.02■■■□□ 2.4
SAMD1-203ENST00000541938 ZMYM3Q14202 1370 aa30.01■■■□□ 2.39
SAMD1-203ENST00000541938 TCOF1Q13428 1488 aaKnown RBP30■■■□□ 2.39
SAMD1-203ENST00000541938 ABCC5O15440 1437 aa30■■■□□ 2.39
SAMD1-203ENST00000541938 C3P01024 1663 aa29.99■■■□□ 2.39
SAMD1-203ENST00000541938 PPARGC1BQ86YN6 1023 aaKnown RBP29.95■■■□□ 2.39
SAMD1-203ENST00000541938 SETD1BQ9UPS6 1966 aaKnown RBP29.94■■■□□ 2.38
SAMD1-203ENST00000541938 DAPK1P53355 1430 aa29.94■■■□□ 2.38
SAMD1-203ENST00000541938 CLTCQ00610 1675 aaKnown RBP29.93■■■□□ 2.38
SAMD1-203ENST00000541938 FAM50AQ14320 339 aaKnown RBP29.93■■■□□ 2.38
SAMD1-203ENST00000541938 ILDR1Q86SU0 546 aaPredicted RBP29.92■■■□□ 2.38
SAMD1-203ENST00000541938 MROH2AA6NES4 1674 aa29.91■■■□□ 2.38
SAMD1-203ENST00000541938 UHRF1BP1Q6BDS2 1440 aa29.9■■■□□ 2.38
SAMD1-203ENST00000541938 RRP7BPQ9NSQ0 103 aa29.9■■■□□ 2.38
SAMD1-203ENST00000541938 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
SAMD1-203ENST00000541938 SHANK2Q9UPX8 1470 aa29.9■■■□□ 2.38
SAMD1-203ENST00000541938 PREX1Q8TCU6 1659 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms