RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 ZFYVE16Q7Z3T8 1539 aa24.38■■□□□ 1.49
ITM2C-208ENST00000541852 MADDQ8WXG6 1647 aa24.35■■□□□ 1.49
ITM2C-208ENST00000541852 MYO5CQ9NQX4 1742 aa24.35■■□□□ 1.49
ITM2C-208ENST00000541852 YEATS2Q9ULM3 1422 aa24.34■■□□□ 1.49
ITM2C-208ENST00000541852 KIF14Q15058 1648 aa24.33■■□□□ 1.49
ITM2C-208ENST00000541852 ATP10AO60312 1499 aa24.32■■□□□ 1.48
ITM2C-208ENST00000541852 CASKIN1Q8WXD9 1431 aa24.3■■□□□ 1.48
ITM2C-208ENST00000541852 CCDC18Q5T9S5 1454 aa24.29■■□□□ 1.48
ITM2C-208ENST00000541852 ZNF518AQ6AHZ1 1483 aa24.29■■□□□ 1.48
ITM2C-208ENST00000541852 ARHGAP5Q13017 1502 aa24.27■■□□□ 1.48
ITM2C-208ENST00000541852 MLECQ14165 292 aa24.27■■□□□ 1.48
ITM2C-208ENST00000541852 PCF11O94913 1555 aaKnown RBP24.27■■□□□ 1.48
ITM2C-208ENST00000541852 RIMS1Q86UR5 1692 aaKnown RBP24.27■■□□□ 1.48
ITM2C-208ENST00000541852 AFAP1Q8N556 730 aa24.26■■□□□ 1.47
ITM2C-208ENST00000541852 MYT1LQ9UL68 1186 aa24.26■■□□□ 1.47
ITM2C-208ENST00000541852 C9orf84Q5VXU9 1444 aa24.26■■□□□ 1.47
ITM2C-208ENST00000541852 LMTK3Q96Q04 1460 aa24.23■■□□□ 1.47
ITM2C-208ENST00000541852 FBXO41Q8TF61 875 aa24.21■■□□□ 1.47
ITM2C-208ENST00000541852 PLPPR3Q6T4P5 718 aa24.2■■□□□ 1.46
ITM2C-208ENST00000541852 LRRIQ1Q96JM4 1722 aa24.19■■□□□ 1.46
ITM2C-208ENST00000541852 FYCO1Q9BQS8 1478 aa24.18■■□□□ 1.46
ITM2C-208ENST00000541852 KDM5CP41229 1560 aa24.17■■□□□ 1.46
ITM2C-208ENST00000541852 ARHGEF12Q9NZN5 1544 aa24.16■■□□□ 1.46
ITM2C-208ENST00000541852 SIGLEC1Q9BZZ2 1709 aa24.16■■□□□ 1.46
ITM2C-208ENST00000541852 MLH3Q9UHC1 1453 aa24.16■■□□□ 1.46
ITM2C-208ENST00000541852 FER1L4A9Z1Z3 1794 aa24.16■■□□□ 1.46
ITM2C-208ENST00000541852 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
ITM2C-208ENST00000541852 HSPA2P54652 639 aa24.12■■□□□ 1.45
ITM2C-208ENST00000541852 PREX2Q70Z35 1606 aa24.12■■□□□ 1.45
ITM2C-208ENST00000541852 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
ITM2C-208ENST00000541852 REREQ9P2R6 1566 aa24.11■■□□□ 1.45
ITM2C-208ENST00000541852 SETD1BQ9UPS6 1966 aaKnown RBP24.1■■□□□ 1.45
ITM2C-208ENST00000541852 TRAPPC8Q9Y2L5 1435 aa24.08■■□□□ 1.44
ITM2C-208ENST00000541852 ABCC1P33527 1531 aa24.07■■□□□ 1.44
ITM2C-208ENST00000541852 CEBPAP49715 358 aaPredicted RBP24.06■■□□□ 1.44
ITM2C-208ENST00000541852 ZNF777Q9ULD5 760 aaPredicted RBP24.06■■□□□ 1.44
ITM2C-208ENST00000541852 DMRT2Q9Y5R5 561 aa24.06■■□□□ 1.44
ITM2C-208ENST00000541852 AGLP35573 1532 aa24.05■■□□□ 1.44
ITM2C-208ENST00000541852 DIP2CQ9Y2E4 1556 aa24.05■■□□□ 1.44
ITM2C-208ENST00000541852 CDC42BPAQ5VT25 1732 aa24.04■■□□□ 1.44
ITM2C-208ENST00000541852 CFDP1Q9UEE9 299 aaPredicted RBP24.03■■□□□ 1.44
ITM2C-208ENST00000541852 GPATCH8Q9UKJ3 1502 aaKnown RBP24.02■■□□□ 1.44
ITM2C-208ENST00000541852 ITSN2Q9NZM3 1697 aa24.02■■□□□ 1.44
ITM2C-208ENST00000541852 SPAG9O60271 1321 aaKnown RBP24.01■■□□□ 1.43
ITM2C-208ENST00000541852 KIAA1107Q9UPP5 1409 aa24.01■■□□□ 1.43
ITM2C-208ENST00000541852 PLEKHH2Q8IVE3 1493 aa24■■□□□ 1.43
ITM2C-208ENST00000541852 MTUS2Q5JR59 1369 aa24■■□□□ 1.43
ITM2C-208ENST00000541852 PREX1Q8TCU6 1659 aa23.99■■□□□ 1.43
ITM2C-208ENST00000541852 HNRNPMP52272 730 aaKnown RBP eCLIP23.99■■□□□ 1.43
ITM2C-208ENST00000541852 CCNB3Q8WWL7 1395 aa23.99■■□□□ 1.43
ITM2C-208ENST00000541852 UHRF1BP1Q6BDS2 1440 aa23.99■■□□□ 1.43
ITM2C-208ENST00000541852 CNTLNQ9NXG0 1405 aa23.99■■□□□ 1.43
ITM2C-208ENST00000541852 ABCA6Q8N139 1617 aa23.99■■□□□ 1.43
ITM2C-208ENST00000541852 KIDINS220Q9ULH0 1771 aa23.96■■□□□ 1.43
ITM2C-208ENST00000541852 SAMD9LQ8IVG5 1584 aa23.95■■□□□ 1.42
ITM2C-208ENST00000541852 CERKQ8TCT0 537 aa23.94■■□□□ 1.42
ITM2C-208ENST00000541852 PPP6R1Q9UPN7 881 aa23.9■■□□□ 1.42
ITM2C-208ENST00000541852 SYCP2Q9BX26 1530 aa23.89■■□□□ 1.42
ITM2C-208ENST00000541852 C3P01024 1663 aa23.88■■□□□ 1.41
ITM2C-208ENST00000541852 RSPH4AQ5TD94 716 aa23.86■■□□□ 1.41
ITM2C-208ENST00000541852 ZMYM3Q14202 1370 aa23.85■■□□□ 1.41
ITM2C-208ENST00000541852 ATP7AQ04656 1500 aa23.84■■□□□ 1.41
ITM2C-208ENST00000541852 NPATQ14207 1427 aa23.84■■□□□ 1.41
ITM2C-208ENST00000541852 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
ITM2C-208ENST00000541852 A2MP01023 1474 aa23.83■■□□□ 1.41
ITM2C-208ENST00000541852 EHBP1L1Q8N3D4 1523 aa23.83■■□□□ 1.41
ITM2C-208ENST00000541852 PTPRTO14522 1441 aa23.82■■□□□ 1.4
ITM2C-208ENST00000541852 STRCQ7RTU9 1775 aa23.8■■□□□ 1.4
ITM2C-208ENST00000541852 MROH2AA6NES4 1674 aa23.8■■□□□ 1.4
ITM2C-208ENST00000541852 RTEL1-TNFRSF6BF6WH68 1400 aa23.8■■□□□ 1.4
ITM2C-208ENST00000541852 GGT6Q6P531 493 aa23.8■■□□□ 1.4
ITM2C-208ENST00000541852 ZNF644Q9H582 1327 aaPredicted RBP23.79■■□□□ 1.4
ITM2C-208ENST00000541852 SUPT6HQ7KZ85 1726 aaKnown RBP23.79■■□□□ 1.4
ITM2C-208ENST00000541852 INO80Q9ULG1 1556 aaPredicted RBP23.78■■□□□ 1.4
ITM2C-208ENST00000541852 MBD5Q9P267 1494 aa23.76■■□□□ 1.39
ITM2C-208ENST00000541852 TIAM1Q13009 1591 aa23.76■■□□□ 1.39
ITM2C-208ENST00000541852 PLXNC1O60486 1568 aa23.75■■□□□ 1.39
ITM2C-208ENST00000541852 ADGBQ8N7X0 1667 aa23.74■■□□□ 1.39
ITM2C-208ENST00000541852 DHX29Q7Z478 1369 aaKnown RBP23.73■■□□□ 1.39
ITM2C-208ENST00000541852 NCOA1Q15788 1441 aa23.71■■□□□ 1.39
ITM2C-208ENST00000541852 TSPY4P0CV99 314 aa23.7■■□□□ 1.38
ITM2C-208ENST00000541852 TSPY10P0CW01 314 aa23.7■■□□□ 1.38
ITM2C-208ENST00000541852 PKD2Q13563 968 aa23.7■■□□□ 1.38
ITM2C-208ENST00000541852 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
ITM2C-208ENST00000541852 CLTCQ00610 1675 aaKnown RBP23.67■■□□□ 1.38
ITM2C-208ENST00000541852 PTPRKQ15262 1439 aa23.67■■□□□ 1.38
ITM2C-208ENST00000541852 CCDC141Q6ZP82 1450 aa23.66■■□□□ 1.38
ITM2C-208ENST00000541852 KIF3BO15066 747 aa23.65■■□□□ 1.38
ITM2C-208ENST00000541852 CAMSAP1Q5T5Y3 1602 aa23.65■■□□□ 1.38
ITM2C-208ENST00000541852 LOC105371045A0A1W2PR82 267 aa23.63■■□□□ 1.37
ITM2C-208ENST00000541852 VPS8Q8N3P4 1428 aa23.62■■□□□ 1.37
ITM2C-208ENST00000541852 CAMSAP2Q08AD1 1489 aa23.62■■□□□ 1.37
ITM2C-208ENST00000541852 PLA2R1Q13018 1463 aa23.61■■□□□ 1.37
ITM2C-208ENST00000541852 IQSEC2Q5JU85 1478 aa23.61■■□□□ 1.37
ITM2C-208ENST00000541852 NCKAP5LQ9HCH0 1330 aa23.6■■□□□ 1.37
ITM2C-208ENST00000541852 WASHC2CQ9Y4E1 1318 aa23.6■■□□□ 1.37
ITM2C-208ENST00000541852 FAM135AQ9P2D6 1515 aa23.59■■□□□ 1.37
ITM2C-208ENST00000541852 LRRC9Q6ZRR7 1453 aa23.59■■□□□ 1.37
ITM2C-208ENST00000541852 MAP3K1Q13233 1512 aa23.58■■□□□ 1.36
ITM2C-208ENST00000541852 ARHGEF5Q12774 1597 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms