RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 LAS1LQ9Y4W2 734 aaKnown RBP19.11■□□□□ 0.65
GCFC2-211ENST00000541687 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
GCFC2-211ENST00000541687 SLC24A1O60721 1099 aa19.09■□□□□ 0.65
GCFC2-211ENST00000541687 ROCK2O75116 1388 aaKnown RBP19.09■□□□□ 0.65
GCFC2-211ENST00000541687 TIAM1Q13009 1591 aa19.09■□□□□ 0.65
GCFC2-211ENST00000541687 NOP58Q9Y2X3 529 aaKnown RBP19.09■□□□□ 0.65
GCFC2-211ENST00000541687 BIVM-ERCC5R4GMW8 1640 aa19.08■□□□□ 0.65
GCFC2-211ENST00000541687 ARXQ96QS3 562 aa19.08■□□□□ 0.64
GCFC2-211ENST00000541687 RGS3P49796 1198 aa19.08■□□□□ 0.64
GCFC2-211ENST00000541687 TMF1P82094 1093 aa19.07■□□□□ 0.64
GCFC2-211ENST00000541687 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
GCFC2-211ENST00000541687 CARMIL2Q6F5E8 1435 aa19.07■□□□□ 0.64
GCFC2-211ENST00000541687 PLPPR3Q6T4P5 718 aa19.06■□□□□ 0.64
GCFC2-211ENST00000541687 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
GCFC2-211ENST00000541687 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
GCFC2-211ENST00000541687 CCDC184Q52MB2 194 aa19.04■□□□□ 0.64
GCFC2-211ENST00000541687 KIF7Q2M1P5 1343 aa19.03■□□□□ 0.64
GCFC2-211ENST00000541687 FYCO1Q9BQS8 1478 aa19.02■□□□□ 0.63
GCFC2-211ENST00000541687 RCAN3Q9UKA8 241 aa19.02■□□□□ 0.63
GCFC2-211ENST00000541687 CDCA8Q53HL2 280 aa19.01■□□□□ 0.63
GCFC2-211ENST00000541687 USP47Q96K76 1375 aa19■□□□□ 0.63
GCFC2-211ENST00000541687 NBPF8Q3BBV2 869 aa19■□□□□ 0.63
GCFC2-211ENST00000541687 KTN1Q86UP2 1357 aaKnown RBP19■□□□□ 0.63
GCFC2-211ENST00000541687 FRAT1Q92837 279 aaPredicted RBP19■□□□□ 0.63
GCFC2-211ENST00000541687 TOPBP1Q92547 1522 aa19■□□□□ 0.63
GCFC2-211ENST00000541687 CCDC7Q96M83 1385 aa18.99■□□□□ 0.63
GCFC2-211ENST00000541687 UPF2Q9HAU5 1272 aaKnown RBP18.99■□□□□ 0.63
GCFC2-211ENST00000541687 ERICH6BQ5W0A0 696 aa18.98■□□□□ 0.63
GCFC2-211ENST00000541687 RALBP1Q15311 655 aa18.96■□□□□ 0.63
GCFC2-211ENST00000541687 ZBED9Q6R2W3 1325 aa18.96■□□□□ 0.63
GCFC2-211ENST00000541687 HSP90AA1P07900 732 aaKnown RBP18.94■□□□□ 0.62
GCFC2-211ENST00000541687 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
GCFC2-211ENST00000541687 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
GCFC2-211ENST00000541687 HFM1A2PYH4 1435 aa18.93■□□□□ 0.62
GCFC2-211ENST00000541687 NLRP13Q86W25 1043 aa18.93■□□□□ 0.62
GCFC2-211ENST00000541687 PLIN1O60240 522 aa18.92■□□□□ 0.62
GCFC2-211ENST00000541687 PCF11O94913 1555 aaKnown RBP18.92■□□□□ 0.62
GCFC2-211ENST00000541687 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
GCFC2-211ENST00000541687 ESF1Q9H501 851 aaKnown RBP18.91■□□□□ 0.62
GCFC2-211ENST00000541687 NAIPQ13075 1403 aa18.9■□□□□ 0.62
GCFC2-211ENST00000541687 PANK3Q9H999 370 aa18.9■□□□□ 0.62
GCFC2-211ENST00000541687 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
GCFC2-211ENST00000541687 DEKP35659 375 aaKnown RBP18.89■□□□□ 0.62
GCFC2-211ENST00000541687 GGT6Q6P531 493 aa18.89■□□□□ 0.62
GCFC2-211ENST00000541687 C11orf95C9JLR9 678 aaPredicted RBP18.89■□□□□ 0.61
GCFC2-211ENST00000541687 CCDC146Q8IYE0 955 aa18.88■□□□□ 0.61
GCFC2-211ENST00000541687 EFCAB2Q5VUJ9 269 aa18.88■□□□□ 0.61
GCFC2-211ENST00000541687 RTN4Q9NQC3 1192 aaKnown RBP18.88■□□□□ 0.61
GCFC2-211ENST00000541687 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
GCFC2-211ENST00000541687 DDRGK1Q96HY6 314 aa18.87■□□□□ 0.61
GCFC2-211ENST00000541687 MYBBP1AQ9BQG0 1328 aaKnown RBP18.86■□□□□ 0.61
GCFC2-211ENST00000541687 CFAP53Q96M91 514 aa18.86■□□□□ 0.61
GCFC2-211ENST00000541687 KIF3BO15066 747 aa18.86■□□□□ 0.61
GCFC2-211ENST00000541687 KIF15Q9NS87 1388 aa18.85■□□□□ 0.61
GCFC2-211ENST00000541687 EFCAB5A4FU69 1503 aa18.85■□□□□ 0.61
GCFC2-211ENST00000541687 U2SURPO15042 1029 aaKnown RBP18.85■□□□□ 0.61
GCFC2-211ENST00000541687 CCDC144AA2RUR9 1427 aa18.84■□□□□ 0.61
GCFC2-211ENST00000541687 ANP32BQ92688 251 aaKnown RBP18.83■□□□□ 0.61
GCFC2-211ENST00000541687 PRDM2Q13029 1718 aa18.83■□□□□ 0.6
GCFC2-211ENST00000541687 NUTM2DQ5VT03 806 aaPredicted RBP18.81■□□□□ 0.6
GCFC2-211ENST00000541687 MORC1Q86VD1 984 aa18.81■□□□□ 0.6
GCFC2-211ENST00000541687 CDK13Q14004 1512 aaKnown RBP18.81■□□□□ 0.6
GCFC2-211ENST00000541687 PTPRGP23470 1445 aa18.81■□□□□ 0.6
GCFC2-211ENST00000541687 PRG4Q92954 1404 aaPredicted RBP18.81■□□□□ 0.6
GCFC2-211ENST00000541687 ANKRD50Q9ULJ7 1429 aa18.81■□□□□ 0.6
GCFC2-211ENST00000541687 ABCA10Q8WWZ4 1543 aa18.81■□□□□ 0.6
GCFC2-211ENST00000541687 FTSJ3Q8IY81 847 aaKnown RBP18.81■□□□□ 0.6
GCFC2-211ENST00000541687 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
GCFC2-211ENST00000541687 STK26Q9P289 416 aa18.8■□□□□ 0.6
GCFC2-211ENST00000541687 DNMBPQ6XZF7 1577 aa18.79■□□□□ 0.6
GCFC2-211ENST00000541687 SPAG9O60271 1321 aaKnown RBP18.78■□□□□ 0.6
GCFC2-211ENST00000541687 KANK1Q14678 1352 aa18.77■□□□□ 0.6
GCFC2-211ENST00000541687 RRP1P56182 461 aaKnown RBP18.77■□□□□ 0.6
GCFC2-211ENST00000541687 IPO9Q96P70 1041 aaKnown RBP18.77■□□□□ 0.6
GCFC2-211ENST00000541687 POGKQ9P215 609 aa18.77■□□□□ 0.6
GCFC2-211ENST00000541687 PTPRKQ15262 1439 aa18.76■□□□□ 0.59
GCFC2-211ENST00000541687 NBPF1Q3BBV0 1214 aa18.76■□□□□ 0.59
GCFC2-211ENST00000541687 RSPH4AQ5TD94 716 aa18.76■□□□□ 0.59
GCFC2-211ENST00000541687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.76■□□□□ 0.59
GCFC2-211ENST00000541687 TCERG1O14776 1098 aaKnown RBP18.76■□□□□ 0.59
GCFC2-211ENST00000541687 PLEKHG5O94827 1062 aa18.76■□□□□ 0.59
GCFC2-211ENST00000541687 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
GCFC2-211ENST00000541687 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
GCFC2-211ENST00000541687 GOLGA2Q08379 1002 aa18.74■□□□□ 0.59
GCFC2-211ENST00000541687 SRPK2P78362 688 aaKnown RBP18.74■□□□□ 0.59
GCFC2-211ENST00000541687 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
GCFC2-211ENST00000541687 CDCA7LQ96GN5 454 aa18.73■□□□□ 0.59
GCFC2-211ENST00000541687 AKNAQ7Z591 1439 aa18.73■□□□□ 0.59
GCFC2-211ENST00000541687 BECN1Q14457 450 aa18.72■□□□□ 0.59
GCFC2-211ENST00000541687 CRBNQ96SW2 442 aa18.72■□□□□ 0.59
GCFC2-211ENST00000541687 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
GCFC2-211ENST00000541687 RRP7AQ9Y3A4 280 aaKnown RBP18.72■□□□□ 0.59
GCFC2-211ENST00000541687 MAP3K1Q13233 1512 aa18.72■□□□□ 0.59
GCFC2-211ENST00000541687 PDE3BQ13370 1112 aa18.72■□□□□ 0.59
GCFC2-211ENST00000541687 FANCIQ9NVI1 1328 aa18.71■□□□□ 0.59
GCFC2-211ENST00000541687 CLUAP1Q96AJ1 413 aa18.71■□□□□ 0.59
GCFC2-211ENST00000541687 EPRSP07814 1512 aaKnown RBP18.71■□□□□ 0.59
GCFC2-211ENST00000541687 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
GCFC2-211ENST00000541687 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
GCFC2-211ENST00000541687 SLC4A3P48751 1232 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms