RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 PAK3O75914 559 aaPredicted RBP20.46■□□□□ 0.87
AC005840.4-201ENST00000541242 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
AC005840.4-201ENST00000541242 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
AC005840.4-201ENST00000541242 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
AC005840.4-201ENST00000541242 MYT1LQ9UL68 1186 aa20.45■□□□□ 0.86
AC005840.4-201ENST00000541242 FBLN2P98095 1184 aa20.44■□□□□ 0.86
AC005840.4-201ENST00000541242 TCOF1Q13428 1488 aaKnown RBP20.44■□□□□ 0.86
AC005840.4-201ENST00000541242 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
AC005840.4-201ENST00000541242 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
AC005840.4-201ENST00000541242 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
AC005840.4-201ENST00000541242 NOP58Q9Y2X3 529 aaKnown RBP20.42■□□□□ 0.86
AC005840.4-201ENST00000541242 RRP7BPQ9NSQ0 103 aa20.41■□□□□ 0.86
AC005840.4-201ENST00000541242 UACAQ9BZF9 1416 aa20.41■□□□□ 0.86
AC005840.4-201ENST00000541242 WASHC2AQ641Q2 1341 aa20.4■□□□□ 0.86
AC005840.4-201ENST00000541242 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.86
AC005840.4-201ENST00000541242 ERICH6BQ5W0A0 696 aa20.39■□□□□ 0.85
AC005840.4-201ENST00000541242 RAPGEF6Q8TEU7 1601 aa20.39■□□□□ 0.85
AC005840.4-201ENST00000541242 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
AC005840.4-201ENST00000541242 MIA2Q96PC5 1412 aa20.36■□□□□ 0.85
AC005840.4-201ENST00000541242 HSPA5P11021 654 aaKnown RBP20.35■□□□□ 0.85
AC005840.4-201ENST00000541242 NUP160Q12769 1436 aa20.34■□□□□ 0.85
AC005840.4-201ENST00000541242 PLB1Q6P1J6 1458 aa20.34■□□□□ 0.85
AC005840.4-201ENST00000541242 KDM5BQ9UGL1 1544 aa20.33■□□□□ 0.85
AC005840.4-201ENST00000541242 JPH4Q96JJ6 628 aa20.33■□□□□ 0.85
AC005840.4-201ENST00000541242 KDM6BO15054 1643 aa20.33■□□□□ 0.84
AC005840.4-201ENST00000541242 ZNF644Q9H582 1327 aaPredicted RBP20.31■□□□□ 0.84
AC005840.4-201ENST00000541242 GCC2Q8IWJ2 1684 aa20.3■□□□□ 0.84
AC005840.4-201ENST00000541242 PRG4Q92954 1404 aaPredicted RBP20.29■□□□□ 0.84
AC005840.4-201ENST00000541242 MRS2Q9HD23 443 aa20.28■□□□□ 0.84
AC005840.4-201ENST00000541242 DENND4BO75064 1496 aaPredicted RBP20.27■□□□□ 0.84
AC005840.4-201ENST00000541242 AKNAQ7Z591 1439 aa20.27■□□□□ 0.83
AC005840.4-201ENST00000541242 C11orf95C9JLR9 678 aaPredicted RBP20.26■□□□□ 0.83
AC005840.4-201ENST00000541242 CARMIL2Q6F5E8 1435 aa20.25■□□□□ 0.83
AC005840.4-201ENST00000541242 PRKRIP1Q9H875 184 aaPredicted RBP20.25■□□□□ 0.83
AC005840.4-201ENST00000541242 DAPK1P53355 1430 aa20.24■□□□□ 0.83
AC005840.4-201ENST00000541242 TROQ12816 1431 aaPredicted RBP20.24■□□□□ 0.83
AC005840.4-201ENST00000541242 ZBED9Q6R2W3 1325 aa20.24■□□□□ 0.83
AC005840.4-201ENST00000541242 CNTLNQ9NXG0 1405 aa20.24■□□□□ 0.83
AC005840.4-201ENST00000541242 ABCC5O15440 1437 aa20.23■□□□□ 0.83
AC005840.4-201ENST00000541242 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
AC005840.4-201ENST00000541242 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
AC005840.4-201ENST00000541242 DNMT1P26358 1616 aaKnown RBP20.21■□□□□ 0.83
AC005840.4-201ENST00000541242 KIF14Q15058 1648 aa20.2■□□□□ 0.82
AC005840.4-201ENST00000541242 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.82
AC005840.4-201ENST00000541242 IL27Q8NEV9 243 aa20.19■□□□□ 0.82
AC005840.4-201ENST00000541242 CNGB1Q14028 1251 aaPredicted RBP20.19■□□□□ 0.82
AC005840.4-201ENST00000541242 IPO9Q96P70 1041 aaKnown RBP20.19■□□□□ 0.82
AC005840.4-201ENST00000541242 MPHOSPH9Q99550 1183 aa20.18■□□□□ 0.82
AC005840.4-201ENST00000541242 ANP32AP39687 249 aaKnown RBP20.17■□□□□ 0.82
AC005840.4-201ENST00000541242 RTL5Q5HYW3 569 aaPredicted RBP20.17■□□□□ 0.82
AC005840.4-201ENST00000541242 RTN4Q9NQC3 1192 aaKnown RBP20.17■□□□□ 0.82
AC005840.4-201ENST00000541242 ROCK1Q13464 1354 aa20.17■□□□□ 0.82
AC005840.4-201ENST00000541242 GPATCH8Q9UKJ3 1502 aaKnown RBP20.17■□□□□ 0.82
AC005840.4-201ENST00000541242 FOXD1Q16676 465 aa20.16■□□□□ 0.82
AC005840.4-201ENST00000541242 CFDP1Q9UEE9 299 aaPredicted RBP20.16■□□□□ 0.82
AC005840.4-201ENST00000541242 ABCA8O94911 1581 aa20.15■□□□□ 0.82
AC005840.4-201ENST00000541242 ZBTB47Q9UFB7 747 aaPredicted RBP20.15■□□□□ 0.82
AC005840.4-201ENST00000541242 CCDC136Q96JN2 1154 aa20.15■□□□□ 0.82
AC005840.4-201ENST00000541242 CAMSAP2Q08AD1 1489 aa20.14■□□□□ 0.81
AC005840.4-201ENST00000541242 ADCY10Q96PN6 1610 aa20.14■□□□□ 0.81
AC005840.4-201ENST00000541242 CCDC7Q96M83 1385 aa20.13■□□□□ 0.81
AC005840.4-201ENST00000541242 ATP10BO94823 1461 aa20.13■□□□□ 0.81
AC005840.4-201ENST00000541242 ZNF777Q9ULD5 760 aaPredicted RBP20.13■□□□□ 0.81
AC005840.4-201ENST00000541242 CHD1O14646 1710 aa20.12■□□□□ 0.81
AC005840.4-201ENST00000541242 ITSN2Q9NZM3 1697 aa20.1■□□□□ 0.81
AC005840.4-201ENST00000541242 PLEKHD1A6NEE1 506 aa20.09■□□□□ 0.81
AC005840.4-201ENST00000541242 NCOA1Q15788 1441 aa20.09■□□□□ 0.81
AC005840.4-201ENST00000541242 L3MBTL2Q969R5 705 aa20.08■□□□□ 0.81
AC005840.4-201ENST00000541242 NPM2Q86SE8 214 aaKnown RBP20.07■□□□□ 0.8
AC005840.4-201ENST00000541242 ABCC10Q5T3U5 1492 aa20.05■□□□□ 0.8
AC005840.4-201ENST00000541242 PTPRGP23470 1445 aa20.05■□□□□ 0.8
AC005840.4-201ENST00000541242 SMG6Q86US8 1419 aaKnown RBP20.05■□□□□ 0.8
AC005840.4-201ENST00000541242 ANKRD30BQ9BXX2 1392 aa20.04■□□□□ 0.8
AC005840.4-201ENST00000541242 CDC42BPAQ5VT25 1732 aa20.04■□□□□ 0.8
AC005840.4-201ENST00000541242 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
AC005840.4-201ENST00000541242 SLC4A1APQ9BWU0 796 aaKnown RBP20.03■□□□□ 0.8
AC005840.4-201ENST00000541242 LAS1LQ9Y4W2 734 aaKnown RBP20.03■□□□□ 0.8
AC005840.4-201ENST00000541242 KIF7Q2M1P5 1343 aa20.03■□□□□ 0.8
AC005840.4-201ENST00000541242 NBPF8Q3BBV2 869 aa20.02■□□□□ 0.8
AC005840.4-201ENST00000541242 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.01■□□□□ 0.79
AC005840.4-201ENST00000541242 CROCC2H7BZ55 1655 aa20.01■□□□□ 0.79
AC005840.4-201ENST00000541242 ADGBQ8N7X0 1667 aa20.01■□□□□ 0.79
AC005840.4-201ENST00000541242 ADGRL2O95490 1459 aa19.99■□□□□ 0.79
AC005840.4-201ENST00000541242 PZPP20742 1482 aa19.99■□□□□ 0.79
AC005840.4-201ENST00000541242 RNF123Q5XPI4 1314 aa19.99■□□□□ 0.79
AC005840.4-201ENST00000541242 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
AC005840.4-201ENST00000541242 RPRD2Q5VT52 1461 aaKnown RBP19.97■□□□□ 0.79
AC005840.4-201ENST00000541242 NEFMP07197 916 aa19.96■□□□□ 0.79
AC005840.4-201ENST00000541242 ANKRD30AQ9BXX3 1397 aa19.95■□□□□ 0.78
AC005840.4-201ENST00000541242 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
AC005840.4-201ENST00000541242 POLR1AO95602 1720 aaPredicted RBP19.94■□□□□ 0.78
AC005840.4-201ENST00000541242 SHROOM2Q13796 1616 aa19.93■□□□□ 0.78
AC005840.4-201ENST00000541242 TEX14Q8IWB6 1497 aa19.93■□□□□ 0.78
AC005840.4-201ENST00000541242 HNRNPMP52272 730 aaKnown RBP eCLIP19.93■□□□□ 0.78
AC005840.4-201ENST00000541242 C9orf84Q5VXU9 1444 aa19.91■□□□□ 0.78
AC005840.4-201ENST00000541242 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
AC005840.4-201ENST00000541242 SPATA31E1Q6ZUB1 1445 aa19.89■□□□□ 0.77
AC005840.4-201ENST00000541242 DHX29Q7Z478 1369 aaKnown RBP19.89■□□□□ 0.77
AC005840.4-201ENST00000541242 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
AC005840.4-201ENST00000541242 PKD2Q13563 968 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms