RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 MAGI2Q86UL8 1455 aa26.73■■□□□ 1.87
TRIM65-203ENST00000540812 SIGLEC1Q9BZZ2 1709 aa26.73■■□□□ 1.87
TRIM65-203ENST00000540812 TROQ12816 1431 aaPredicted RBP26.72■■□□□ 1.87
TRIM65-203ENST00000540812 RIMS1Q86UR5 1692 aaKnown RBP26.71■■□□□ 1.87
TRIM65-203ENST00000540812 EFCAB2Q5VUJ9 269 aa26.7■■□□□ 1.86
TRIM65-203ENST00000540812 MYO5CQ9NQX4 1742 aa26.7■■□□□ 1.86
TRIM65-203ENST00000540812 LRRIQ1Q96JM4 1722 aa26.69■■□□□ 1.86
TRIM65-203ENST00000540812 PCF11O94913 1555 aaKnown RBP26.66■■□□□ 1.86
TRIM65-203ENST00000540812 LMTK3Q96Q04 1460 aa26.65■■□□□ 1.86
TRIM65-203ENST00000540812 CLIP1P30622 1438 aa26.65■■□□□ 1.86
TRIM65-203ENST00000540812 MLECQ14165 292 aa26.64■■□□□ 1.86
TRIM65-203ENST00000540812 PLPPR3Q6T4P5 718 aa26.64■■□□□ 1.86
TRIM65-203ENST00000540812 ARHGAP5Q13017 1502 aa26.62■■□□□ 1.85
TRIM65-203ENST00000540812 CASKIN1Q8WXD9 1431 aa26.61■■□□□ 1.85
TRIM65-203ENST00000540812 ATP10AO60312 1499 aa26.61■■□□□ 1.85
TRIM65-203ENST00000540812 C9orf84Q5VXU9 1444 aa26.58■■□□□ 1.85
TRIM65-203ENST00000540812 AFAP1Q8N556 730 aa26.58■■□□□ 1.85
TRIM65-203ENST00000540812 ZNF518AQ6AHZ1 1483 aa26.56■■□□□ 1.84
TRIM65-203ENST00000540812 CCDC18Q5T9S5 1454 aa26.55■■□□□ 1.84
TRIM65-203ENST00000540812 KDM5CP41229 1560 aa26.54■■□□□ 1.84
TRIM65-203ENST00000540812 FER1L4A9Z1Z3 1794 aa26.53■■□□□ 1.84
TRIM65-203ENST00000540812 HSPA2P54652 639 aa26.53■■□□□ 1.84
TRIM65-203ENST00000540812 ARHGEF12Q9NZN5 1544 aa26.53■■□□□ 1.84
TRIM65-203ENST00000540812 CDC42BPBQ9Y5S2 1711 aa26.53■■□□□ 1.84
TRIM65-203ENST00000540812 PREX2Q70Z35 1606 aa26.49■■□□□ 1.83
TRIM65-203ENST00000540812 MYT1LQ9UL68 1186 aa26.48■■□□□ 1.83
TRIM65-203ENST00000540812 FYCO1Q9BQS8 1478 aa26.48■■□□□ 1.83
TRIM65-203ENST00000540812 TRAPPC8Q9Y2L5 1435 aa26.47■■□□□ 1.83
TRIM65-203ENST00000540812 DIP2CQ9Y2E4 1556 aa26.46■■□□□ 1.83
TRIM65-203ENST00000540812 ABCC1P33527 1531 aa26.46■■□□□ 1.83
TRIM65-203ENST00000540812 FBXO41Q8TF61 875 aa26.44■■□□□ 1.82
TRIM65-203ENST00000540812 MLH3Q9UHC1 1453 aa26.43■■□□□ 1.82
TRIM65-203ENST00000540812 CEBPAP49715 358 aaPredicted RBP26.43■■□□□ 1.82
TRIM65-203ENST00000540812 ABCA6Q8N139 1617 aa26.43■■□□□ 1.82
TRIM65-203ENST00000540812 ITSN2Q9NZM3 1697 aa26.41■■□□□ 1.82
TRIM65-203ENST00000540812 CDC42BPAQ5VT25 1732 aa26.4■■□□□ 1.82
TRIM65-203ENST00000540812 REREQ9P2R6 1566 aa26.39■■□□□ 1.82
TRIM65-203ENST00000540812 ZNF777Q9ULD5 760 aaPredicted RBP26.35■■□□□ 1.81
TRIM65-203ENST00000540812 GPATCH8Q9UKJ3 1502 aaKnown RBP26.34■■□□□ 1.81
TRIM65-203ENST00000540812 KIDINS220Q9ULH0 1771 aa26.33■■□□□ 1.8
TRIM65-203ENST00000540812 SAMD9LQ8IVG5 1584 aa26.33■■□□□ 1.8
TRIM65-203ENST00000540812 AGLP35573 1532 aa26.32■■□□□ 1.8
TRIM65-203ENST00000540812 PREX1Q8TCU6 1659 aa26.31■■□□□ 1.8
TRIM65-203ENST00000540812 SYCP2Q9BX26 1530 aa26.29■■□□□ 1.8
TRIM65-203ENST00000540812 HNRNPMP52272 730 aaKnown RBP eCLIP26.28■■□□□ 1.8
TRIM65-203ENST00000540812 UHRF1BP1Q6BDS2 1440 aa26.24■■□□□ 1.79
TRIM65-203ENST00000540812 SPAG9O60271 1321 aaKnown RBP26.24■■□□□ 1.79
TRIM65-203ENST00000540812 CFDP1Q9UEE9 299 aaPredicted RBP26.24■■□□□ 1.79
TRIM65-203ENST00000540812 C3P01024 1663 aa26.24■■□□□ 1.79
TRIM65-203ENST00000540812 MTUS2Q5JR59 1369 aa26.23■■□□□ 1.79
TRIM65-203ENST00000540812 CCNB3Q8WWL7 1395 aa26.23■■□□□ 1.79
TRIM65-203ENST00000540812 ESF1Q9H501 851 aaKnown RBP26.22■■□□□ 1.79
TRIM65-203ENST00000540812 KIAA1107Q9UPP5 1409 aa26.22■■□□□ 1.79
TRIM65-203ENST00000540812 SETD1BQ9UPS6 1966 aaKnown RBP26.21■■□□□ 1.79
TRIM65-203ENST00000540812 PLEKHH2Q8IVE3 1493 aa26.18■■□□□ 1.78
TRIM65-203ENST00000540812 CERKQ8TCT0 537 aa26.18■■□□□ 1.78
TRIM65-203ENST00000540812 STRCQ7RTU9 1775 aa26.18■■□□□ 1.78
TRIM65-203ENST00000540812 CNTLNQ9NXG0 1405 aa26.17■■□□□ 1.78
TRIM65-203ENST00000540812 ATP7AQ04656 1500 aa26.17■■□□□ 1.78
TRIM65-203ENST00000540812 CEP162Q5TB80 1403 aa26.16■■□□□ 1.78
TRIM65-203ENST00000540812 ZNF644Q9H582 1327 aaPredicted RBP26.14■■□□□ 1.78
TRIM65-203ENST00000540812 TIAM1Q13009 1591 aa26.14■■□□□ 1.78
TRIM65-203ENST00000540812 INO80Q9ULG1 1556 aaPredicted RBP26.14■■□□□ 1.78
TRIM65-203ENST00000540812 EHBP1L1Q8N3D4 1523 aa26.14■■□□□ 1.77
TRIM65-203ENST00000540812 SUPT6HQ7KZ85 1726 aaKnown RBP26.13■■□□□ 1.77
TRIM65-203ENST00000540812 A2MP01023 1474 aa26.11■■□□□ 1.77
TRIM65-203ENST00000540812 PLXNC1O60486 1568 aa26.11■■□□□ 1.77
TRIM65-203ENST00000540812 DMRT2Q9Y5R5 561 aa26.1■■□□□ 1.77
TRIM65-203ENST00000540812 ZMYM3Q14202 1370 aa26.08■■□□□ 1.77
TRIM65-203ENST00000540812 MBD5Q9P267 1494 aa26.08■■□□□ 1.77
TRIM65-203ENST00000540812 MROH2AA6NES4 1674 aa26.06■■□□□ 1.76
TRIM65-203ENST00000540812 NPATQ14207 1427 aa26.05■■□□□ 1.76
TRIM65-203ENST00000540812 GGT6Q6P531 493 aa26.03■■□□□ 1.76
TRIM65-203ENST00000540812 PTPRTO14522 1441 aa26.03■■□□□ 1.76
TRIM65-203ENST00000540812 CLTCQ00610 1675 aaKnown RBP26.03■■□□□ 1.76
TRIM65-203ENST00000540812 NCOA1Q15788 1441 aa26.02■■□□□ 1.76
TRIM65-203ENST00000540812 NCOA2Q15596 1464 aa26■■□□□ 1.75
TRIM65-203ENST00000540812 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
TRIM65-203ENST00000540812 RTEL1-TNFRSF6BF6WH68 1400 aa25.97■■□□□ 1.75
TRIM65-203ENST00000540812 PTPRKQ15262 1439 aa25.97■■□□□ 1.75
TRIM65-203ENST00000540812 CAMSAP1Q5T5Y3 1602 aa25.96■■□□□ 1.75
TRIM65-203ENST00000540812 LOC105371045A0A1W2PR82 267 aa25.95■■□□□ 1.74
TRIM65-203ENST00000540812 CAMSAP2Q08AD1 1489 aa25.94■■□□□ 1.74
TRIM65-203ENST00000540812 DHX29Q7Z478 1369 aaKnown RBP25.94■■□□□ 1.74
TRIM65-203ENST00000540812 CCDC141Q6ZP82 1450 aa25.93■■□□□ 1.74
TRIM65-203ENST00000540812 PPP6R1Q9UPN7 881 aa25.93■■□□□ 1.74
TRIM65-203ENST00000540812 MYO3AQ8NEV4 1616 aa25.92■■□□□ 1.74
TRIM65-203ENST00000540812 LTBP4Q8N2S1 1624 aa25.91■■□□□ 1.74
TRIM65-203ENST00000540812 NCKAP5LQ9HCH0 1330 aa25.9■■□□□ 1.74
TRIM65-203ENST00000540812 VPS8Q8N3P4 1428 aa25.88■■□□□ 1.73
TRIM65-203ENST00000540812 ZNF142P52746 1687 aaPredicted RBP25.87■■□□□ 1.73
TRIM65-203ENST00000540812 CEP170BQ9Y4F5 1589 aaPredicted RBP25.87■■□□□ 1.73
TRIM65-203ENST00000540812 KIF3BO15066 747 aa25.87■■□□□ 1.73
TRIM65-203ENST00000540812 LRRC9Q6ZRR7 1453 aa25.85■■□□□ 1.73
TRIM65-203ENST00000540812 RSPH4AQ5TD94 716 aa25.85■■□□□ 1.73
TRIM65-203ENST00000540812 PLA2R1Q13018 1463 aa25.83■■□□□ 1.73
TRIM65-203ENST00000540812 ARHGEF5Q12774 1597 aa25.82■■□□□ 1.72
TRIM65-203ENST00000540812 TCOF1Q13428 1488 aaKnown RBP25.81■■□□□ 1.72
TRIM65-203ENST00000540812 PKD2Q13563 968 aa25.81■■□□□ 1.72
TRIM65-203ENST00000540812 KANK4Q5T7N3 995 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms