RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 PREX2Q70Z35 1606 aa30.73■■■□□ 2.51
RAB35-204ENST00000540803 ZMYM4Q5VZL5 1548 aa30.73■■■□□ 2.51
RAB35-204ENST00000540803 SCAPERQ9BY12 1400 aa30.73■■■□□ 2.51
RAB35-204ENST00000540803 CDC42BPAQ5VT25 1732 aa30.71■■■□□ 2.51
RAB35-204ENST00000540803 ARHGEF40Q8TER5 1519 aa30.71■■■□□ 2.51
RAB35-204ENST00000540803 POGZQ7Z3K3 1410 aa30.7■■■□□ 2.5
RAB35-204ENST00000540803 ZFYVE16Q7Z3T8 1539 aa30.63■■■□□ 2.49
RAB35-204ENST00000540803 MAGI2Q86UL8 1455 aa30.62■■■□□ 2.49
RAB35-204ENST00000540803 MTUS2Q5JR59 1369 aa30.61■■■□□ 2.49
RAB35-204ENST00000540803 YEATS2Q9ULM3 1422 aa30.6■■■□□ 2.49
RAB35-204ENST00000540803 ABCC1P33527 1531 aa30.58■■■□□ 2.49
RAB35-204ENST00000540803 EHBP1L1Q8N3D4 1523 aa30.58■■■□□ 2.49
RAB35-204ENST00000540803 VPS8Q8N3P4 1428 aa30.58■■■□□ 2.49
RAB35-204ENST00000540803 GPATCH8Q9UKJ3 1502 aaKnown RBP30.57■■■□□ 2.49
RAB35-204ENST00000540803 ZNF518AQ6AHZ1 1483 aa30.57■■■□□ 2.48
RAB35-204ENST00000540803 KDM5CP41229 1560 aa30.56■■■□□ 2.48
RAB35-204ENST00000540803 BCORL1Q5H9F3 1711 aa30.56■■■□□ 2.48
RAB35-204ENST00000540803 ADAMTSL3P82987 1691 aa30.55■■■□□ 2.48
RAB35-204ENST00000540803 ITSN2Q9NZM3 1697 aa30.55■■■□□ 2.48
RAB35-204ENST00000540803 SIGLEC1Q9BZZ2 1709 aa30.55■■■□□ 2.48
RAB35-204ENST00000540803 ARHGEF12Q9NZN5 1544 aa30.54■■■□□ 2.48
RAB35-204ENST00000540803 TIAM1Q13009 1591 aa30.51■■■□□ 2.47
RAB35-204ENST00000540803 SAMD9LQ8IVG5 1584 aa30.51■■■□□ 2.47
RAB35-204ENST00000540803 AFAP1Q8N556 730 aa30.51■■■□□ 2.47
RAB35-204ENST00000540803 ARID4BQ4LE39 1312 aaPredicted RBP30.49■■■□□ 2.47
RAB35-204ENST00000540803 TRAPPC8Q9Y2L5 1435 aa30.48■■■□□ 2.47
RAB35-204ENST00000540803 CCNB3Q8WWL7 1395 aa30.48■■■□□ 2.47
RAB35-204ENST00000540803 HECW2Q9P2P5 1572 aa30.48■■■□□ 2.47
RAB35-204ENST00000540803 ATP10AO60312 1499 aa30.44■■■□□ 2.46
RAB35-204ENST00000540803 MADDQ8WXG6 1647 aa30.44■■■□□ 2.46
RAB35-204ENST00000540803 ZNF777Q9ULD5 760 aaPredicted RBP30.44■■■□□ 2.46
RAB35-204ENST00000540803 SUPT6HQ7KZ85 1726 aaKnown RBP30.43■■■□□ 2.46
RAB35-204ENST00000540803 SYCP2Q9BX26 1530 aa30.42■■■□□ 2.46
RAB35-204ENST00000540803 C9orf84Q5VXU9 1444 aa30.42■■■□□ 2.46
RAB35-204ENST00000540803 CFDP1Q9UEE9 299 aaPredicted RBP30.42■■■□□ 2.46
RAB35-204ENST00000540803 MLH3Q9UHC1 1453 aa30.42■■■□□ 2.46
RAB35-204ENST00000540803 DIP2CQ9Y2E4 1556 aa30.41■■■□□ 2.46
RAB35-204ENST00000540803 ABCA6Q8N139 1617 aa30.4■■■□□ 2.46
RAB35-204ENST00000540803 PTPRMP28827 1452 aa30.38■■■□□ 2.45
RAB35-204ENST00000540803 NCOA2Q15596 1464 aa30.38■■■□□ 2.45
RAB35-204ENST00000540803 KIDINS220Q9ULH0 1771 aa30.38■■■□□ 2.45
RAB35-204ENST00000540803 KIAA1107Q9UPP5 1409 aa30.37■■■□□ 2.45
RAB35-204ENST00000540803 LRRC9Q6ZRR7 1453 aa30.37■■■□□ 2.45
RAB35-204ENST00000540803 PLEKHH2Q8IVE3 1493 aa30.37■■■□□ 2.45
RAB35-204ENST00000540803 MAP3K1Q13233 1512 aa30.37■■■□□ 2.45
RAB35-204ENST00000540803 MYT1LQ9UL68 1186 aa30.35■■■□□ 2.45
RAB35-204ENST00000540803 RIMS1Q86UR5 1692 aaKnown RBP30.35■■■□□ 2.45
RAB35-204ENST00000540803 REREQ9P2R6 1566 aa30.34■■■□□ 2.45
RAB35-204ENST00000540803 HNRNPMP52272 730 aaKnown RBP eCLIP30.34■■■□□ 2.451e-7■■■■□ 25.8
RAB35-204ENST00000540803 FER1L4A9Z1Z3 1794 aa30.3■■■□□ 2.44
RAB35-204ENST00000540803 ZNF644Q9H582 1327 aaPredicted RBP30.28■■■□□ 2.44
RAB35-204ENST00000540803 MLECQ14165 292 aa30.28■■■□□ 2.44
RAB35-204ENST00000540803 KANK4Q5T7N3 995 aaPredicted RBP30.27■■■□□ 2.44
RAB35-204ENST00000540803 INO80Q9ULG1 1556 aaPredicted RBP30.25■■■□□ 2.43
RAB35-204ENST00000540803 MBD5Q9P267 1494 aa30.25■■■□□ 2.43
RAB35-204ENST00000540803 SPAG9O60271 1321 aaKnown RBP30.24■■■□□ 2.43
RAB35-204ENST00000540803 ATP7AQ04656 1500 aa30.23■■■□□ 2.43
RAB35-204ENST00000540803 AGLP35573 1532 aa30.22■■■□□ 2.43
RAB35-204ENST00000540803 CAMSAP2Q08AD1 1489 aa30.2■■■□□ 2.43
RAB35-204ENST00000540803 PLXNC1O60486 1568 aa30.12■■■□□ 2.41
RAB35-204ENST00000540803 APLP2Q06481 763 aa30.12■■■□□ 2.41
RAB35-204ENST00000540803 CCDC141Q6ZP82 1450 aa30.12■■■□□ 2.41
RAB35-204ENST00000540803 ADGBQ8N7X0 1667 aa30.11■■■□□ 2.41
RAB35-204ENST00000540803 RTEL1-TNFRSF6BF6WH68 1400 aa30.09■■■□□ 2.41
RAB35-204ENST00000540803 A2MP01023 1474 aa30.09■■■□□ 2.41
RAB35-204ENST00000540803 ARHGEF5Q12774 1597 aa30.09■■■□□ 2.41
RAB35-204ENST00000540803 MYOM3Q5VTT5 1437 aa30.09■■■□□ 2.41
RAB35-204ENST00000540803 PLPPR3Q6T4P5 718 aa30.09■■■□□ 2.41
RAB35-204ENST00000540803 MIA2Q96PC5 1412 aa30.05■■■□□ 2.4
RAB35-204ENST00000540803 RSPH4AQ5TD94 716 aa30.05■■■□□ 2.4
RAB35-204ENST00000540803 LMTK3Q96Q04 1460 aa30.04■■■□□ 2.4
RAB35-204ENST00000540803 C3P01024 1663 aa30■■■□□ 2.39
RAB35-204ENST00000540803 CEBPAP49715 358 aaPredicted RBP29.99■■■□□ 2.39
RAB35-204ENST00000540803 CNTLNQ9NXG0 1405 aa29.95■■■□□ 2.38
RAB35-204ENST00000540803 MAST1Q9Y2H9 1570 aa29.94■■■□□ 2.38
RAB35-204ENST00000540803 DHX29Q7Z478 1369 aaKnown RBP29.94■■■□□ 2.38
RAB35-204ENST00000540803 PTPN23Q9H3S7 1636 aa29.94■■■□□ 2.38
RAB35-204ENST00000540803 ESF1Q9H501 851 aaKnown RBP29.94■■■□□ 2.38
RAB35-204ENST00000540803 MROH2AA6NES4 1674 aa29.94■■■□□ 2.38
RAB35-204ENST00000540803 PREX1Q8TCU6 1659 aa29.94■■■□□ 2.38
RAB35-204ENST00000540803 TSPY4P0CV99 314 aa29.93■■■□□ 2.38
RAB35-204ENST00000540803 TSPY10P0CW01 314 aa29.93■■■□□ 2.38
RAB35-204ENST00000540803 CLTCQ00610 1675 aaKnown RBP29.91■■■□□ 2.38
RAB35-204ENST00000540803 SETD1BQ9UPS6 1966 aaKnown RBP29.9■■■□□ 2.38
RAB35-204ENST00000540803 FGD6Q6ZV73 1430 aa29.88■■■□□ 2.37
RAB35-204ENST00000540803 GGT6Q6P531 493 aa29.87■■■□□ 2.37
RAB35-204ENST00000540803 CROCC2H7BZ55 1655 aa29.86■■■□□ 2.37
RAB35-204ENST00000540803 TCOF1Q13428 1488 aaKnown RBP29.86■■■□□ 2.37
RAB35-204ENST00000540803 HSPA2P54652 639 aa29.84■■■□□ 2.37
RAB35-204ENST00000540803 ZMYM3Q14202 1370 aa29.82■■■□□ 2.36
RAB35-204ENST00000540803 ABCC5O15440 1437 aa29.81■■■□□ 2.36
RAB35-204ENST00000540803 PPP6R1Q9UPN7 881 aa29.81■■■□□ 2.36
RAB35-204ENST00000540803 DNMT1P26358 1616 aaKnown RBP29.81■■■□□ 2.36
RAB35-204ENST00000540803 KIF3BO15066 747 aa29.8■■■□□ 2.36
RAB35-204ENST00000540803 SHANK2Q9UPX8 1470 aa29.8■■■□□ 2.36
RAB35-204ENST00000540803 UHRF1BP1Q6BDS2 1440 aa29.79■■■□□ 2.36
RAB35-204ENST00000540803 DAPK1P53355 1430 aa29.77■■■□□ 2.36
RAB35-204ENST00000540803 NPATQ14207 1427 aa29.76■■■□□ 2.35
RAB35-204ENST00000540803 EIF2AK4Q9P2K8 1649 aaKnown RBP29.74■■■□□ 2.35
RAB35-204ENST00000540803 RNF17Q9BXT8 1623 aaKnown RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms