RNA–Protein interactions for RNA: ENST00000540667.5

PTMS-204, Transcript of parathymosin, humanhuman

TSL 2

Gene PTMS, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-204ENST00000540667 HECW1Q76N89 1606 aa23.52■■□□□ 1.36
PTMS-204ENST00000540667 RAPGEF6Q8TEU7 1601 aa23.52■■□□□ 1.36
PTMS-204ENST00000540667 CEBPAP49715 358 aaPredicted RBP23.49■■□□□ 1.35
PTMS-204ENST00000540667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
PTMS-204ENST00000540667 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
PTMS-204ENST00000540667 ATP10AO60312 1499 aa23.43■■□□□ 1.34
PTMS-204ENST00000540667 C9orf84Q5VXU9 1444 aa23.43■■□□□ 1.34
PTMS-204ENST00000540667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.343e-12■■■■□ 19.8
PTMS-204ENST00000540667 NUP153P49790 1475 aaKnown RBP23.42■■□□□ 1.34
PTMS-204ENST00000540667 P3H3Q8IVL6 736 aa23.41■■□□□ 1.34
PTMS-204ENST00000540667 SAMD9Q5K651 1589 aa23.4■■□□□ 1.34
PTMS-204ENST00000540667 PRXQ9BXM0 1461 aa23.37■■□□□ 1.33
PTMS-204ENST00000540667 MED1Q15648 1581 aaPredicted RBP23.37■■□□□ 1.33
PTMS-204ENST00000540667 C3P01024 1663 aa23.37■■□□□ 1.33
PTMS-204ENST00000540667 NCOA1Q15788 1441 aa23.36■■□□□ 1.33
PTMS-204ENST00000540667 UBAP1LF5GYI3 381 aa23.34■■□□□ 1.33
PTMS-204ENST00000540667 SCAPERQ9BY12 1400 aa23.33■■□□□ 1.33
PTMS-204ENST00000540667 PLEKHD1A6NEE1 506 aa23.33■■□□□ 1.33
PTMS-204ENST00000540667 TRAPPC8Q9Y2L5 1435 aa23.27■■□□□ 1.32
PTMS-204ENST00000540667 REREQ9P2R6 1566 aa23.25■■□□□ 1.31
PTMS-204ENST00000540667 PLCH2O75038 1416 aa23.25■■□□□ 1.31
PTMS-204ENST00000540667 CAMSAP1Q5T5Y3 1602 aa23.23■■□□□ 1.31
PTMS-204ENST00000540667 ZNF335Q9H4Z2 1342 aaPredicted RBP23.22■■□□□ 1.31
PTMS-204ENST00000540667 KDM5CP41229 1560 aa23.2■■□□□ 1.3
PTMS-204ENST00000540667 DIP2CQ9Y2E4 1556 aa23.18■■□□□ 1.3
PTMS-204ENST00000540667 ZNF518AQ6AHZ1 1483 aa23.18■■□□□ 1.3
PTMS-204ENST00000540667 AGLP35573 1532 aa23.18■■□□□ 1.3
PTMS-204ENST00000540667 HSPA1LP34931 641 aa23.17■■□□□ 1.3
PTMS-204ENST00000540667 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
PTMS-204ENST00000540667 ABCA6Q8N139 1617 aa23.11■■□□□ 1.29
PTMS-204ENST00000540667 NPATQ14207 1427 aa23.11■■□□□ 1.29
PTMS-204ENST00000540667 CNTLNQ9NXG0 1405 aa23.11■■□□□ 1.29
PTMS-204ENST00000540667 EFCAB2Q5VUJ9 269 aa23.11■■□□□ 1.29
PTMS-204ENST00000540667 ESF1Q9H501 851 aaKnown RBP23.11■■□□□ 1.29
PTMS-204ENST00000540667 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
PTMS-204ENST00000540667 PLA2R1Q13018 1463 aa23.1■■□□□ 1.29
PTMS-204ENST00000540667 PHF23Q9BUL5 403 aaPredicted RBP23.09■■□□□ 1.29
PTMS-204ENST00000540667 MROH2AA6NES4 1674 aa23.09■■□□□ 1.29
PTMS-204ENST00000540667 ZNF142P52746 1687 aaPredicted RBP23.08■■□□□ 1.29
PTMS-204ENST00000540667 PKD2Q13563 968 aa23.07■■□□□ 1.28
PTMS-204ENST00000540667 TCOF1Q13428 1488 aaKnown RBP23.06■■□□□ 1.28
PTMS-204ENST00000540667 SUPT6HQ7KZ85 1726 aaKnown RBP23.06■■□□□ 1.28
PTMS-204ENST00000540667 AFAP1Q8N556 730 aa23.06■■□□□ 1.28
PTMS-204ENST00000540667 MLH3Q9UHC1 1453 aa23.05■■□□□ 1.28
PTMS-204ENST00000540667 CDK13Q14004 1512 aaKnown RBP23.04■■□□□ 1.28
PTMS-204ENST00000540667 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
PTMS-204ENST00000540667 TOM1O60784 492 aa23.02■■□□□ 1.28
PTMS-204ENST00000540667 PIP4K2BP78356 416 aa23.02■■□□□ 1.28
PTMS-204ENST00000540667 MYO3AQ8NEV4 1616 aa23.01■■□□□ 1.27
PTMS-204ENST00000540667 MYT1LQ9UL68 1186 aa22.99■■□□□ 1.27
PTMS-204ENST00000540667 CPS1P31327 1500 aa22.98■■□□□ 1.27
PTMS-204ENST00000540667 ARHGAP5Q13017 1502 aa22.98■■□□□ 1.27
PTMS-204ENST00000540667 CEP170BQ9Y4F5 1589 aaPredicted RBP22.97■■□□□ 1.27
PTMS-204ENST00000540667 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
PTMS-204ENST00000540667 ZMYM3Q14202 1370 aa22.95■■□□□ 1.26
PTMS-204ENST00000540667 KIF14Q15058 1648 aa22.95■■□□□ 1.26
PTMS-204ENST00000540667 KIDINS220Q9ULH0 1771 aa22.94■■□□□ 1.26
PTMS-204ENST00000540667 ALKQ9UM73 1620 aa22.92■■□□□ 1.26
PTMS-204ENST00000540667 CDC42BPBQ9Y5S2 1711 aa22.91■■□□□ 1.26
PTMS-204ENST00000540667 RANGAP1P46060 587 aaPredicted RBP22.9■■□□□ 1.26
PTMS-204ENST00000540667 ITSN2Q9NZM3 1697 aa22.89■■□□□ 1.25
PTMS-204ENST00000540667 PTPRKQ15262 1439 aa22.89■■□□□ 1.25
PTMS-204ENST00000540667 ABCC1P33527 1531 aa22.87■■□□□ 1.25
PTMS-204ENST00000540667 CLTCQ00610 1675 aaKnown RBP22.87■■□□□ 1.25
PTMS-204ENST00000540667 SHANK2Q9UPX8 1470 aa22.87■■□□□ 1.25
PTMS-204ENST00000540667 POLR1AO95602 1720 aaPredicted RBP22.87■■□□□ 1.25
PTMS-204ENST00000540667 RGS17Q9UGC6 210 aaPredicted RBP22.85■■□□□ 1.25
PTMS-204ENST00000540667 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.25
PTMS-204ENST00000540667 DNMT1P26358 1616 aaKnown RBP22.82■■□□□ 1.24
PTMS-204ENST00000540667 NEURL4Q96JN8 1562 aa22.82■■□□□ 1.24
PTMS-204ENST00000540667 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
PTMS-204ENST00000540667 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
PTMS-204ENST00000540667 PREX2Q70Z35 1606 aa22.81■■□□□ 1.24
PTMS-204ENST00000540667 A2ML1A8K2U0 1454 aa22.79■■□□□ 1.24
PTMS-204ENST00000540667 VWDEQ8N2E2 1590 aa22.78■■□□□ 1.24
PTMS-204ENST00000540667 CLIP1P30622 1438 aa22.75■■□□□ 1.23
PTMS-204ENST00000540667 SAMD9LQ8IVG5 1584 aa22.74■■□□□ 1.23
PTMS-204ENST00000540667 PLXNC1O60486 1568 aa22.73■■□□□ 1.23
PTMS-204ENST00000540667 FMN1Q68DA7 1419 aa22.7■■□□□ 1.22
PTMS-204ENST00000540667 RNF17Q9BXT8 1623 aaKnown RBP22.7■■□□□ 1.22
PTMS-204ENST00000540667 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
PTMS-204ENST00000540667 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
PTMS-204ENST00000540667 CDC42BPAQ5VT25 1732 aa22.67■■□□□ 1.22
PTMS-204ENST00000540667 POTEAQ6S8J7 498 aa22.65■■□□□ 1.22
PTMS-204ENST00000540667 SENP3Q9H4L4 574 aaPredicted RBP22.65■■□□□ 1.22
PTMS-204ENST00000540667 STRCP1A6NGW2 1772 aa22.65■■□□□ 1.22
PTMS-204ENST00000540667 SYNMO15061 1565 aa22.64■■□□□ 1.22
PTMS-204ENST00000540667 MED14O60244 1454 aa22.64■■□□□ 1.21
PTMS-204ENST00000540667 DEPDC5O75140 1603 aa22.64■■□□□ 1.21
PTMS-204ENST00000540667 LRRC7Q96NW7 1537 aa22.63■■□□□ 1.21
PTMS-204ENST00000540667 A2MP01023 1474 aa22.63■■□□□ 1.21
PTMS-204ENST00000540667 ATP7AQ04656 1500 aa22.62■■□□□ 1.21
PTMS-204ENST00000540667 INO80Q9ULG1 1556 aaPredicted RBP22.62■■□□□ 1.21
PTMS-204ENST00000540667 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
PTMS-204ENST00000540667 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
PTMS-204ENST00000540667 ANKLE2Q86XL3 938 aa22.6■■□□□ 1.21
PTMS-204ENST00000540667 NPHP4O75161 1426 aaPredicted RBP22.59■■□□□ 1.21
PTMS-204ENST00000540667 EEA1Q15075 1411 aa22.59■■□□□ 1.21
PTMS-204ENST00000540667 GGT6Q6P531 493 aa22.59■■□□□ 1.21
PTMS-204ENST00000540667 IQGAP1P46940 1657 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms