RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 ARHGAP5Q13017 1502 aa23.26■■□□□ 1.31
MDM1-210ENST00000540418 KDM6BO15054 1643 aa23.25■■□□□ 1.31
MDM1-210ENST00000540418 COL17A1Q9UMD9 1497 aaPredicted RBP23.25■■□□□ 1.31
MDM1-210ENST00000540418 CFAP74Q9C0B2 1584 aa23.25■■□□□ 1.31
MDM1-210ENST00000540418 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
MDM1-210ENST00000540418 PREX2Q70Z35 1606 aa23.23■■□□□ 1.31
MDM1-210ENST00000540418 CDC42BPAQ5VT25 1732 aa23.22■■□□□ 1.31
MDM1-210ENST00000540418 CDC42BPBQ9Y5S2 1711 aa23.22■■□□□ 1.31
MDM1-210ENST00000540418 ZNF777Q9ULD5 760 aaPredicted RBP23.19■■□□□ 1.3
MDM1-210ENST00000540418 ADGRL1O94910 1474 aa23.18■■□□□ 1.3
MDM1-210ENST00000540418 SCAPERQ9BY12 1400 aa23.17■■□□□ 1.3
MDM1-210ENST00000540418 RAPGEF3O95398 923 aa23.17■■□□□ 1.3
MDM1-210ENST00000540418 DENND4BO75064 1496 aaPredicted RBP23.16■■□□□ 1.3
MDM1-210ENST00000540418 ITSN2Q9NZM3 1697 aa23.15■■□□□ 1.3
MDM1-210ENST00000540418 PPARGC1BQ86YN6 1023 aaKnown RBP23.13■■□□□ 1.29
MDM1-210ENST00000540418 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
MDM1-210ENST00000540418 ZNF644Q9H582 1327 aaPredicted RBP23.11■■□□□ 1.29
MDM1-210ENST00000540418 SAMD9LQ8IVG5 1584 aa23.1■■□□□ 1.29
MDM1-210ENST00000540418 PLEKHH2Q8IVE3 1493 aa23.09■■□□□ 1.29
MDM1-210ENST00000540418 MIA2Q96PC5 1412 aa23.09■■□□□ 1.29
MDM1-210ENST00000540418 KIAA1107Q9UPP5 1409 aa23.09■■□□□ 1.29
MDM1-210ENST00000540418 ABCC1P33527 1531 aa23.09■■□□□ 1.29
MDM1-210ENST00000540418 POGZQ7Z3K3 1410 aa23.08■■□□□ 1.29
MDM1-210ENST00000540418 HNRNPMP52272 730 aaKnown RBP eCLIP23.08■■□□□ 1.29
MDM1-210ENST00000540418 ARHGEF12Q9NZN5 1544 aa23.08■■□□□ 1.29
MDM1-210ENST00000540418 AFAP1Q8N556 730 aa23.07■■□□□ 1.28
MDM1-210ENST00000540418 FRMPD1Q5SYB0 1578 aa23.06■■□□□ 1.28
MDM1-210ENST00000540418 ZNF518AQ6AHZ1 1483 aa23.05■■□□□ 1.28
MDM1-210ENST00000540418 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
MDM1-210ENST00000540418 TRAPPC8Q9Y2L5 1435 aa23.04■■□□□ 1.28
MDM1-210ENST00000540418 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
MDM1-210ENST00000540418 CAMSAP2Q08AD1 1489 aa23.03■■□□□ 1.28
MDM1-210ENST00000540418 FGD6Q6ZV73 1430 aa23.01■■□□□ 1.27
MDM1-210ENST00000540418 MBD5Q9P267 1494 aa23.01■■□□□ 1.27
MDM1-210ENST00000540418 RSPH4AQ5TD94 716 aa23.01■■□□□ 1.27
MDM1-210ENST00000540418 ZMYM4Q5VZL5 1548 aa23■■□□□ 1.27
MDM1-210ENST00000540418 MAGI2Q86UL8 1455 aa22.99■■□□□ 1.27
MDM1-210ENST00000540418 KDM5CP41229 1560 aa22.98■■□□□ 1.27
MDM1-210ENST00000540418 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
MDM1-210ENST00000540418 PTPN23Q9H3S7 1636 aa22.96■■□□□ 1.27
MDM1-210ENST00000540418 SPAG9O60271 1321 aaKnown RBP22.95■■□□□ 1.26
MDM1-210ENST00000540418 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
MDM1-210ENST00000540418 MLH3Q9UHC1 1453 aa22.95■■□□□ 1.26
MDM1-210ENST00000540418 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
MDM1-210ENST00000540418 ZFYVE16Q7Z3T8 1539 aa22.92■■□□□ 1.26
MDM1-210ENST00000540418 YEATS2Q9ULM3 1422 aa22.92■■□□□ 1.26
MDM1-210ENST00000540418 ARHGEF5Q12774 1597 aa22.92■■□□□ 1.26
MDM1-210ENST00000540418 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
MDM1-210ENST00000540418 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
MDM1-210ENST00000540418 FAM50AQ14320 339 aaKnown RBP22.91■■□□□ 1.26
MDM1-210ENST00000540418 HECW2Q9P2P5 1572 aa22.9■■□□□ 1.26
MDM1-210ENST00000540418 ARHGEF40Q8TER5 1519 aa22.88■■□□□ 1.25
MDM1-210ENST00000540418 RTEL1-TNFRSF6BF6WH68 1400 aa22.87■■□□□ 1.25
MDM1-210ENST00000540418 ATP10AO60312 1499 aa22.86■■□□□ 1.25
MDM1-210ENST00000540418 ABCC5O15440 1437 aa22.85■■□□□ 1.25
MDM1-210ENST00000540418 ATP7AQ04656 1500 aa22.84■■□□□ 1.25
MDM1-210ENST00000540418 KIDINS220Q9ULH0 1771 aa22.84■■□□□ 1.25
MDM1-210ENST00000540418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.83■■□□□ 1.25
MDM1-210ENST00000540418 INO80Q9ULG1 1556 aaPredicted RBP22.83■■□□□ 1.25
MDM1-210ENST00000540418 DAPK1P53355 1430 aa22.82■■□□□ 1.24
MDM1-210ENST00000540418 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
MDM1-210ENST00000540418 DIP2CQ9Y2E4 1556 aa22.81■■□□□ 1.24
MDM1-210ENST00000540418 C9orf84Q5VXU9 1444 aa22.81■■□□□ 1.24
MDM1-210ENST00000540418 DNMT1P26358 1616 aaKnown RBP22.8■■□□□ 1.24
MDM1-210ENST00000540418 ABCA6Q8N139 1617 aa22.8■■□□□ 1.24
MDM1-210ENST00000540418 ARID4BQ4LE39 1312 aaPredicted RBP22.79■■□□□ 1.24
MDM1-210ENST00000540418 MAST1Q9Y2H9 1570 aa22.78■■□□□ 1.24
MDM1-210ENST00000540418 SHANK2Q9UPX8 1470 aa22.78■■□□□ 1.24
MDM1-210ENST00000540418 REREQ9P2R6 1566 aa22.76■■□□□ 1.23
MDM1-210ENST00000540418 CHIC2Q9UKJ5 165 aa22.75■■□□□ 1.23
MDM1-210ENST00000540418 A2MP01023 1474 aa22.74■■□□□ 1.23
MDM1-210ENST00000540418 CROCC2H7BZ55 1655 aa22.73■■□□□ 1.23
MDM1-210ENST00000540418 DHX29Q7Z478 1369 aaKnown RBP22.72■■□□□ 1.23
MDM1-210ENST00000540418 ITGAEP38570 1179 aa22.71■■□□□ 1.23
MDM1-210ENST00000540418 ADGBQ8N7X0 1667 aa22.7■■□□□ 1.23
MDM1-210ENST00000540418 ANKRD30AQ9BXX3 1397 aa22.7■■□□□ 1.23
MDM1-210ENST00000540418 PTPRKQ15262 1439 aa22.7■■□□□ 1.22
MDM1-210ENST00000540418 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
MDM1-210ENST00000540418 AGLP35573 1532 aa22.7■■□□□ 1.22
MDM1-210ENST00000540418 SIGLEC1Q9BZZ2 1709 aa22.7■■□□□ 1.22
MDM1-210ENST00000540418 KDM4FA0A1W2PPD8 638 aa22.69■■□□□ 1.22
MDM1-210ENST00000540418 PLXNC1O60486 1568 aa22.68■■□□□ 1.22
MDM1-210ENST00000540418 NCOA1Q15788 1441 aa22.68■■□□□ 1.22
MDM1-210ENST00000540418 KIF15Q9NS87 1388 aa22.67■■□□□ 1.22
MDM1-210ENST00000540418 MLECQ14165 292 aa22.67■■□□□ 1.22
MDM1-210ENST00000540418 ADGRL2O95490 1459 aa22.67■■□□□ 1.22
MDM1-210ENST00000540418 ROCK1Q13464 1354 aa22.64■■□□□ 1.21
MDM1-210ENST00000540418 DUOX2Q9NRD8 1548 aa22.63■■□□□ 1.21
MDM1-210ENST00000540418 BCORL1Q5H9F3 1711 aa22.63■■□□□ 1.21
MDM1-210ENST00000540418 KIF3BO15066 747 aa22.62■■□□□ 1.21
MDM1-210ENST00000540418 GGT6Q6P531 493 aa22.59■■□□□ 1.21
MDM1-210ENST00000540418 ADAMTSL3P82987 1691 aa22.59■■□□□ 1.21
MDM1-210ENST00000540418 ERBINQ96RT1 1412 aa22.58■■□□□ 1.21
MDM1-210ENST00000540418 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
MDM1-210ENST00000540418 ESF1Q9H501 851 aaKnown RBP22.54■■□□□ 1.2
MDM1-210ENST00000540418 ANKRD50Q9ULJ7 1429 aa22.54■■□□□ 1.2
MDM1-210ENST00000540418 EIF2AK4Q9P2K8 1649 aaKnown RBP22.53■■□□□ 1.2
MDM1-210ENST00000540418 MADDQ8WXG6 1647 aa22.52■■□□□ 1.2
MDM1-210ENST00000540418 CNTLNQ9NXG0 1405 aa22.48■■□□□ 1.19
MDM1-210ENST00000540418 PTPRMP28827 1452 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms