RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
PXN-209ENST00000540221 SCAPERQ9BY12 1400 aa14.24□□□□□ -0.13
PXN-209ENST00000540221 RAPGEF3O95398 923 aa14.23□□□□□ -0.13
PXN-209ENST00000540221 LRRC9Q6ZRR7 1453 aa14.23□□□□□ -0.13
PXN-209ENST00000540221 GPATCH8Q9UKJ3 1502 aaKnown RBP14.22□□□□□ -0.13
PXN-209ENST00000540221 CFDP1Q9UEE9 299 aaPredicted RBP14.22□□□□□ -0.13
PXN-209ENST00000540221 MAGI2Q86UL8 1455 aa14.21□□□□□ -0.13
PXN-209ENST00000540221 PLEKHH2Q8IVE3 1493 aa14.21□□□□□ -0.13
PXN-209ENST00000540221 PREX2Q70Z35 1606 aa14.21□□□□□ -0.13
PXN-209ENST00000540221 POGZQ7Z3K3 1410 aa14.2□□□□□ -0.14
PXN-209ENST00000540221 ZNF518AQ6AHZ1 1483 aa14.19□□□□□ -0.14
PXN-209ENST00000540221 NCOA2Q15596 1464 aa14.18□□□□□ -0.14
PXN-209ENST00000540221 KIAA1107Q9UPP5 1409 aa14.18□□□□□ -0.14
PXN-209ENST00000540221 SUPT6HQ7KZ85 1726 aaKnown RBP14.18□□□□□ -0.14
PXN-209ENST00000540221 ZMYM4Q5VZL5 1548 aa14.17□□□□□ -0.14
PXN-209ENST00000540221 ZNF777Q9ULD5 760 aaPredicted RBP14.16□□□□□ -0.14
PXN-209ENST00000540221 CDC42BPBQ9Y5S2 1711 aa14.15□□□□□ -0.14
PXN-209ENST00000540221 FRMPD1Q5SYB0 1578 aa14.15□□□□□ -0.14
PXN-209ENST00000540221 KANK4Q5T7N3 995 aaPredicted RBP14.15□□□□□ -0.14
PXN-209ENST00000540221 RSPH4AQ5TD94 716 aa14.15□□□□□ -0.14
PXN-209ENST00000540221 CDC42BPAQ5VT25 1732 aa14.15□□□□□ -0.14
PXN-209ENST00000540221 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
PXN-209ENST00000540221 ABCC1P33527 1531 aa14.15□□□□□ -0.14
PXN-209ENST00000540221 ITSN2Q9NZM3 1697 aa14.14□□□□□ -0.15
PXN-209ENST00000540221 AFAP1Q8N556 730 aa14.13□□□□□ -0.15
PXN-209ENST00000540221 MIA2Q96PC5 1412 aa14.13□□□□□ -0.15
PXN-209ENST00000540221 MLH3Q9UHC1 1453 aa14.12□□□□□ -0.15
PXN-209ENST00000540221 KDM5CP41229 1560 aa14.12□□□□□ -0.15
PXN-209ENST00000540221 ZFYVE16Q7Z3T8 1539 aa14.11□□□□□ -0.15
PXN-209ENST00000540221 ARHGEF40Q8TER5 1519 aa14.11□□□□□ -0.15
PXN-209ENST00000540221 MYT1LQ9UL68 1186 aa14.11□□□□□ -0.15
PXN-209ENST00000540221 SAMD9LQ8IVG5 1584 aa14.1□□□□□ -0.15
PXN-209ENST00000540221 MYOM3Q5VTT5 1437 aa14.1□□□□□ -0.15
PXN-209ENST00000540221 ARHGEF12Q9NZN5 1544 aa14.1□□□□□ -0.15
PXN-209ENST00000540221 TRAPPC8Q9Y2L5 1435 aa14.09□□□□□ -0.15
PXN-209ENST00000540221 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.15
PXN-209ENST00000540221 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
PXN-209ENST00000540221 SPAG9O60271 1321 aaKnown RBP14.09□□□□□ -0.15
PXN-209ENST00000540221 ATP10AO60312 1499 aa14.08□□□□□ -0.16
PXN-209ENST00000540221 SYCP2Q9BX26 1530 aa14.08□□□□□ -0.16
PXN-209ENST00000540221 YEATS2Q9ULM3 1422 aa14.07□□□□□ -0.16
PXN-209ENST00000540221 HECW2Q9P2P5 1572 aa14.07□□□□□ -0.16
PXN-209ENST00000540221 ARID4BQ4LE39 1312 aaPredicted RBP14.07□□□□□ -0.16
PXN-209ENST00000540221 C9orf84Q5VXU9 1444 aa14.07□□□□□ -0.16
PXN-209ENST00000540221 MBD5Q9P267 1494 aa14.06□□□□□ -0.16
PXN-209ENST00000540221 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
PXN-209ENST00000540221 ZNF644Q9H582 1327 aaPredicted RBP14.06□□□□□ -0.16
PXN-209ENST00000540221 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
PXN-209ENST00000540221 TSPY4P0CV99 314 aa14.05□□□□□ -0.16
PXN-209ENST00000540221 TSPY10P0CW01 314 aa14.05□□□□□ -0.16
PXN-209ENST00000540221 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
PXN-209ENST00000540221 CCDC141Q6ZP82 1450 aa14.04□□□□□ -0.16
PXN-209ENST00000540221 REREQ9P2R6 1566 aa14.03□□□□□ -0.16
PXN-209ENST00000540221 ARHGEF5Q12774 1597 aa14.02□□□□□ -0.16
PXN-209ENST00000540221 FGD6Q6ZV73 1430 aa14.01□□□□□ -0.17
PXN-209ENST00000540221 ATP7AQ04656 1500 aa14□□□□□ -0.17
PXN-209ENST00000540221 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
PXN-209ENST00000540221 AGLP35573 1532 aa14□□□□□ -0.17
PXN-209ENST00000540221 INO80Q9ULG1 1556 aaPredicted RBP13.98□□□□□ -0.17
PXN-209ENST00000540221 TCOF1Q13428 1488 aaKnown RBP13.98□□□□□ -0.17
PXN-209ENST00000540221 KIDINS220Q9ULH0 1771 aa13.97□□□□□ -0.17
PXN-209ENST00000540221 A2MP01023 1474 aa13.96□□□□□ -0.17
PXN-209ENST00000540221 ABCA6Q8N139 1617 aa13.96□□□□□ -0.17
PXN-209ENST00000540221 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
PXN-209ENST00000540221 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
PXN-209ENST00000540221 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
PXN-209ENST00000540221 DHX29Q7Z478 1369 aaKnown RBP13.95□□□□□ -0.18
PXN-209ENST00000540221 ESF1Q9H501 851 aaKnown RBP13.94□□□□□ -0.18
PXN-209ENST00000540221 ADAMTSL3P82987 1691 aa13.94□□□□□ -0.18
PXN-209ENST00000540221 SHANK2Q9UPX8 1470 aa13.93□□□□□ -0.18
PXN-209ENST00000540221 MAST1Q9Y2H9 1570 aa13.93□□□□□ -0.18
PXN-209ENST00000540221 MLECQ14165 292 aa13.93□□□□□ -0.18
PXN-209ENST00000540221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.92□□□□□ -0.18
PXN-209ENST00000540221 ABCC5O15440 1437 aa13.91□□□□□ -0.18
PXN-209ENST00000540221 DAPK1P53355 1430 aa13.91□□□□□ -0.18
PXN-209ENST00000540221 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
PXN-209ENST00000540221 PTPRMP28827 1452 aa13.91□□□□□ -0.18
PXN-209ENST00000540221 PLXNC1O60486 1568 aa13.91□□□□□ -0.18
PXN-209ENST00000540221 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
PXN-209ENST00000540221 CNTLNQ9NXG0 1405 aa13.9□□□□□ -0.18
PXN-209ENST00000540221 ANKRD30AQ9BXX3 1397 aa13.89□□□□□ -0.19
PXN-209ENST00000540221 DNMT1P26358 1616 aaKnown RBP13.88□□□□□ -0.19
PXN-209ENST00000540221 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
PXN-209ENST00000540221 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
PXN-209ENST00000540221 KIF15Q9NS87 1388 aa13.86□□□□□ -0.19
PXN-209ENST00000540221 FAM135AQ9P2D6 1515 aa13.86□□□□□ -0.19
PXN-209ENST00000540221 KIF3BO15066 747 aa13.86□□□□□ -0.19
PXN-209ENST00000540221 DUOX2Q9NRD8 1548 aa13.85□□□□□ -0.19
PXN-209ENST00000540221 GGT6Q6P531 493 aa13.85□□□□□ -0.19
PXN-209ENST00000540221 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
PXN-209ENST00000540221 NCOA1Q15788 1441 aa13.84□□□□□ -0.19
PXN-209ENST00000540221 ERBINQ96RT1 1412 aa13.84□□□□□ -0.19
PXN-209ENST00000540221 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
PXN-209ENST00000540221 RRBP1Q9P2E9 1410 aaKnown RBP13.83□□□□□ -0.2
PXN-209ENST00000540221 RRP7BPQ9NSQ0 103 aa13.83□□□□□ -0.2
PXN-209ENST00000540221 ROCK1Q13464 1354 aa13.83□□□□□ -0.2
PXN-209ENST00000540221 CROCC2H7BZ55 1655 aa13.82□□□□□ -0.2
PXN-209ENST00000540221 RIMS1Q86UR5 1692 aaKnown RBP13.82□□□□□ -0.2
PXN-209ENST00000540221 FER1L4A9Z1Z3 1794 aa13.82□□□□□ -0.2
PXN-209ENST00000540221 CHIC2Q9UKJ5 165 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms