RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 MYO5CQ9NQX4 1742 aa24.86■■□□□ 1.57
UBE3B-211ENST00000539843 CCDC18Q5T9S5 1454 aa24.85■■□□□ 1.57
UBE3B-211ENST00000539843 BCORL1Q5H9F3 1711 aa24.85■■□□□ 1.57
UBE3B-211ENST00000539843 CASKIN1Q8WXD9 1431 aa24.82■■□□□ 1.56
UBE3B-211ENST00000539843 ARHGAP5Q13017 1502 aa24.81■■□□□ 1.56
UBE3B-211ENST00000539843 MADDQ8WXG6 1647 aa24.79■■□□□ 1.56
UBE3B-211ENST00000539843 MYT1LQ9UL68 1186 aa24.78■■□□□ 1.56
UBE3B-211ENST00000539843 YEATS2Q9ULM3 1422 aa24.78■■□□□ 1.56
UBE3B-211ENST00000539843 PCF11O94913 1555 aaKnown RBP24.77■■□□□ 1.56
UBE3B-211ENST00000539843 ZNF518AQ6AHZ1 1483 aa24.77■■□□□ 1.56
UBE3B-211ENST00000539843 FYCO1Q9BQS8 1478 aa24.75■■□□□ 1.55
UBE3B-211ENST00000539843 ATP10AO60312 1499 aa24.72■■□□□ 1.55
UBE3B-211ENST00000539843 C9orf84Q5VXU9 1444 aa24.72■■□□□ 1.55
UBE3B-211ENST00000539843 RIMS1Q86UR5 1692 aaKnown RBP24.72■■□□□ 1.55
UBE3B-211ENST00000539843 MLECQ14165 292 aa24.71■■□□□ 1.55
UBE3B-211ENST00000539843 LRRIQ1Q96JM4 1722 aa24.69■■□□□ 1.54
UBE3B-211ENST00000539843 PLPPR3Q6T4P5 718 aa24.68■■□□□ 1.54
UBE3B-211ENST00000539843 ILDR1Q86SU0 546 aaPredicted RBP24.65■■□□□ 1.54
UBE3B-211ENST00000539843 AFAP1Q8N556 730 aa24.65■■□□□ 1.54
UBE3B-211ENST00000539843 PREX2Q70Z35 1606 aa24.64■■□□□ 1.54
UBE3B-211ENST00000539843 KDM5CP41229 1560 aa24.64■■□□□ 1.54
UBE3B-211ENST00000539843 FER1L4A9Z1Z3 1794 aa24.6■■□□□ 1.53
UBE3B-211ENST00000539843 CDC42BPBQ9Y5S2 1711 aa24.6■■□□□ 1.53
UBE3B-211ENST00000539843 LMTK3Q96Q04 1460 aa24.59■■□□□ 1.53
UBE3B-211ENST00000539843 ABCC1P33527 1531 aa24.59■■□□□ 1.53
UBE3B-211ENST00000539843 MLH3Q9UHC1 1453 aa24.58■■□□□ 1.53
UBE3B-211ENST00000539843 ARHGEF12Q9NZN5 1544 aa24.57■■□□□ 1.52
UBE3B-211ENST00000539843 ESF1Q9H501 851 aaKnown RBP24.57■■□□□ 1.52
UBE3B-211ENST00000539843 ZNF777Q9ULD5 760 aaPredicted RBP24.57■■□□□ 1.52
UBE3B-211ENST00000539843 MTUS2Q5JR59 1369 aa24.56■■□□□ 1.52
UBE3B-211ENST00000539843 SIGLEC1Q9BZZ2 1709 aa24.56■■□□□ 1.52
UBE3B-211ENST00000539843 TRAPPC8Q9Y2L5 1435 aa24.53■■□□□ 1.52
UBE3B-211ENST00000539843 REREQ9P2R6 1566 aa24.53■■□□□ 1.52
UBE3B-211ENST00000539843 DIP2CQ9Y2E4 1556 aa24.53■■□□□ 1.52
UBE3B-211ENST00000539843 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
UBE3B-211ENST00000539843 ITSN2Q9NZM3 1697 aa24.53■■□□□ 1.52
UBE3B-211ENST00000539843 CFDP1Q9UEE9 299 aaPredicted RBP24.51■■□□□ 1.51
UBE3B-211ENST00000539843 CDC42BPAQ5VT25 1732 aa24.51■■□□□ 1.51
UBE3B-211ENST00000539843 PLEKHH2Q8IVE3 1493 aa24.51■■□□□ 1.51
UBE3B-211ENST00000539843 GPATCH8Q9UKJ3 1502 aaKnown RBP24.49■■□□□ 1.51
UBE3B-211ENST00000539843 ABCA6Q8N139 1617 aa24.48■■□□□ 1.51
UBE3B-211ENST00000539843 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
UBE3B-211ENST00000539843 HSPA2P54652 639 aa24.47■■□□□ 1.51
UBE3B-211ENST00000539843 AGLP35573 1532 aa24.46■■□□□ 1.51
UBE3B-211ENST00000539843 SPAG9O60271 1321 aaKnown RBP24.46■■□□□ 1.51
UBE3B-211ENST00000539843 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.5
UBE3B-211ENST00000539843 SAMD9LQ8IVG5 1584 aa24.44■■□□□ 1.5
UBE3B-211ENST00000539843 KIAA1107Q9UPP5 1409 aa24.44■■□□□ 1.5
UBE3B-211ENST00000539843 EHBP1L1Q8N3D4 1523 aa24.43■■□□□ 1.5
UBE3B-211ENST00000539843 CEBPAP49715 358 aaPredicted RBP24.42■■□□□ 1.5
UBE3B-211ENST00000539843 FBXO41Q8TF61 875 aa24.42■■□□□ 1.5
UBE3B-211ENST00000539843 HNRNPMP52272 730 aaKnown RBP eCLIP24.41■■□□□ 1.5
UBE3B-211ENST00000539843 UHRF1BP1Q6BDS2 1440 aa24.41■■□□□ 1.5
UBE3B-211ENST00000539843 CNTLNQ9NXG0 1405 aa24.41■■□□□ 1.5
UBE3B-211ENST00000539843 PREX1Q8TCU6 1659 aa24.4■■□□□ 1.5
UBE3B-211ENST00000539843 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.5
UBE3B-211ENST00000539843 ATP7AQ04656 1500 aa24.35■■□□□ 1.49
UBE3B-211ENST00000539843 DMRT2Q9Y5R5 561 aa24.35■■□□□ 1.49
UBE3B-211ENST00000539843 TIAM1Q13009 1591 aa24.32■■□□□ 1.48
UBE3B-211ENST00000539843 A2MP01023 1474 aa24.3■■□□□ 1.48
UBE3B-211ENST00000539843 SETD1BQ9UPS6 1966 aaKnown RBP24.29■■□□□ 1.48
UBE3B-211ENST00000539843 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
UBE3B-211ENST00000539843 C3P01024 1663 aa24.28■■□□□ 1.48
UBE3B-211ENST00000539843 SUPT6HQ7KZ85 1726 aaKnown RBP24.26■■□□□ 1.47
UBE3B-211ENST00000539843 RSPH4AQ5TD94 716 aa24.24■■□□□ 1.47
UBE3B-211ENST00000539843 NCOA2Q15596 1464 aa24.24■■□□□ 1.47
UBE3B-211ENST00000539843 GGT6Q6P531 493 aa24.23■■□□□ 1.47
UBE3B-211ENST00000539843 ZNF644Q9H582 1327 aaPredicted RBP24.23■■□□□ 1.47
UBE3B-211ENST00000539843 RTEL1-TNFRSF6BF6WH68 1400 aa24.23■■□□□ 1.47
UBE3B-211ENST00000539843 NPATQ14207 1427 aa24.23■■□□□ 1.47
UBE3B-211ENST00000539843 VPS8Q8N3P4 1428 aa24.23■■□□□ 1.47
UBE3B-211ENST00000539843 PLXNC1O60486 1568 aa24.23■■□□□ 1.47
UBE3B-211ENST00000539843 MROH2AA6NES4 1674 aa24.22■■□□□ 1.47
UBE3B-211ENST00000539843 PPP6R1Q9UPN7 881 aa24.22■■□□□ 1.47
UBE3B-211ENST00000539843 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
UBE3B-211ENST00000539843 ZMYM3Q14202 1370 aa24.21■■□□□ 1.47
UBE3B-211ENST00000539843 MBD5Q9P267 1494 aa24.2■■□□□ 1.47
UBE3B-211ENST00000539843 CERKQ8TCT0 537 aa24.2■■□□□ 1.46
UBE3B-211ENST00000539843 CCDC141Q6ZP82 1450 aa24.19■■□□□ 1.46
UBE3B-211ENST00000539843 CAMSAP2Q08AD1 1489 aa24.18■■□□□ 1.46
UBE3B-211ENST00000539843 LOC105371045A0A1W2PR82 267 aa24.17■■□□□ 1.46
UBE3B-211ENST00000539843 TSPY4P0CV99 314 aa24.15■■□□□ 1.46
UBE3B-211ENST00000539843 TSPY10P0CW01 314 aa24.15■■□□□ 1.46
UBE3B-211ENST00000539843 CLTCQ00610 1675 aaKnown RBP24.14■■□□□ 1.45
UBE3B-211ENST00000539843 DHX29Q7Z478 1369 aaKnown RBP24.14■■□□□ 1.45
UBE3B-211ENST00000539843 LRRC9Q6ZRR7 1453 aa24.13■■□□□ 1.45
UBE3B-211ENST00000539843 PTPRTO14522 1441 aa24.13■■□□□ 1.45
UBE3B-211ENST00000539843 APLP2Q06481 763 aa24.11■■□□□ 1.45
UBE3B-211ENST00000539843 STRCQ7RTU9 1775 aa24.1■■□□□ 1.45
UBE3B-211ENST00000539843 KIF3BO15066 747 aa24.09■■□□□ 1.45
UBE3B-211ENST00000539843 MAP3K1Q13233 1512 aa24.09■■□□□ 1.45
UBE3B-211ENST00000539843 NCOA1Q15788 1441 aa24.09■■□□□ 1.45
UBE3B-211ENST00000539843 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.44
UBE3B-211ENST00000539843 FAM135AQ9P2D6 1515 aa24.06■■□□□ 1.44
UBE3B-211ENST00000539843 PTPRKQ15262 1439 aa24.06■■□□□ 1.44
UBE3B-211ENST00000539843 CAMSAP1Q5T5Y3 1602 aa24.05■■□□□ 1.44
UBE3B-211ENST00000539843 MYO3AQ8NEV4 1616 aa24.03■■□□□ 1.44
UBE3B-211ENST00000539843 WASHC2CQ9Y4E1 1318 aa24.03■■□□□ 1.44
UBE3B-211ENST00000539843 KDM5DQ9BY66 1539 aa24.02■■□□□ 1.44
UBE3B-211ENST00000539843 PKD2Q13563 968 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms