RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 SYNJ2O15056 1496 aa7.89□□□□□ -1.15
RAB3GAP1-207ENST00000539493 DISP1Q96F81 1524 aa7.89□□□□□ -1.15
RAB3GAP1-207ENST00000539493 KIAA0556O60303 1618 aa7.88□□□□□ -1.15
RAB3GAP1-207ENST00000539493 MAGI3Q5TCQ9 1506 aa7.88□□□□□ -1.15
RAB3GAP1-207ENST00000539493 NCOA2Q15596 1464 aa7.88□□□□□ -1.15
RAB3GAP1-207ENST00000539493 FAM43AQ8N2R8 423 aa7.88□□□□□ -1.15
RAB3GAP1-207ENST00000539493 CDK11AQ9UQ88 783 aaPredicted RBP7.88□□□□□ -1.15
RAB3GAP1-207ENST00000539493 BCL11BQ9C0K0 894 aaPredicted RBP7.88□□□□□ -1.15
RAB3GAP1-207ENST00000539493 SETD5Q9C0A6 1442 aa7.88□□□□□ -1.15
RAB3GAP1-207ENST00000539493 RRP9O43818 475 aaKnown RBP7.87□□□□□ -1.15
RAB3GAP1-207ENST00000539493 RTN4Q9NQC3 1192 aaKnown RBP7.87□□□□□ -1.15
RAB3GAP1-207ENST00000539493 CEP170Q5SW79 1584 aa7.87□□□□□ -1.15
RAB3GAP1-207ENST00000539493 EPRSP07814 1512 aaKnown RBP7.87□□□□□ -1.15
RAB3GAP1-207ENST00000539493 SUPT6HQ7KZ85 1726 aaKnown RBP7.87□□□□□ -1.15
RAB3GAP1-207ENST00000539493 ARHGEF11O15085 1522 aa7.87□□□□□ -1.15
RAB3GAP1-207ENST00000539493 CHMP7Q8WUX9 453 aaPredicted RBP7.87□□□□□ -1.15
RAB3GAP1-207ENST00000539493 MYOM3Q5VTT5 1437 aa7.87□□□□□ -1.15
RAB3GAP1-207ENST00000539493 RTL5Q5HYW3 569 aaPredicted RBP7.86□□□□□ -1.15
RAB3GAP1-207ENST00000539493 CDK13Q14004 1512 aaKnown RBP7.86□□□□□ -1.15
RAB3GAP1-207ENST00000539493 RSPH4AQ5TD94 716 aa7.85□□□□□ -1.15
RAB3GAP1-207ENST00000539493 NUP160Q12769 1436 aa7.85□□□□□ -1.15
RAB3GAP1-207ENST00000539493 BCANQ96GW7 911 aa7.85□□□□□ -1.15
RAB3GAP1-207ENST00000539493 CENPJQ9HC77 1338 aaPredicted RBP7.84□□□□□ -1.15
RAB3GAP1-207ENST00000539493 MAPKBP1O60336 1514 aa7.84□□□□□ -1.15
RAB3GAP1-207ENST00000539493 FBLN2P98095 1184 aa7.84□□□□□ -1.15
RAB3GAP1-207ENST00000539493 NUP153P49790 1475 aaKnown RBP7.83□□□□□ -1.16
RAB3GAP1-207ENST00000539493 PTPRKQ15262 1439 aa7.83□□□□□ -1.16
RAB3GAP1-207ENST00000539493 PAK3O75914 559 aaPredicted RBP7.83□□□□□ -1.16
RAB3GAP1-207ENST00000539493 RAPGEF6Q8TEU7 1601 aa7.82□□□□□ -1.16
RAB3GAP1-207ENST00000539493 PTPN23Q9H3S7 1636 aa7.82□□□□□ -1.16
RAB3GAP1-207ENST00000539493 ARID3CA6NKF2 412 aa7.82□□□□□ -1.16
RAB3GAP1-207ENST00000539493 HFM1A2PYH4 1435 aa7.81□□□□□ -1.16
RAB3GAP1-207ENST00000539493 NBR1Q14596 966 aa7.81□□□□□ -1.16
RAB3GAP1-207ENST00000539493 TCOF1Q13428 1488 aaKnown RBP7.81□□□□□ -1.16
RAB3GAP1-207ENST00000539493 ZNF326Q5BKZ1 582 aaKnown RBP7.81□□□□□ -1.16
RAB3GAP1-207ENST00000539493 A0A0U1RQG5 324 aaPredicted RBP7.8□□□□□ -1.16
RAB3GAP1-207ENST00000539493 JPH4Q96JJ6 628 aa7.8□□□□□ -1.16
RAB3GAP1-207ENST00000539493 PRDM4Q9UKN5 801 aa7.8□□□□□ -1.16
RAB3GAP1-207ENST00000539493 TIMELESSQ9UNS1 1208 aa7.8□□□□□ -1.16
RAB3GAP1-207ENST00000539493 CARMIL2Q6F5E8 1435 aa7.8□□□□□ -1.16
RAB3GAP1-207ENST00000539493 MIA2Q96PC5 1412 aa7.8□□□□□ -1.16
RAB3GAP1-207ENST00000539493 CALD1Q05682 793 aaKnown RBP7.79□□□□□ -1.16
RAB3GAP1-207ENST00000539493 IPO9Q96P70 1041 aaKnown RBP7.79□□□□□ -1.16
RAB3GAP1-207ENST00000539493 PLB1Q6P1J6 1458 aa7.79□□□□□ -1.16
RAB3GAP1-207ENST00000539493 NAIPQ13075 1403 aa7.79□□□□□ -1.16
RAB3GAP1-207ENST00000539493 UACAQ9BZF9 1416 aa7.76□□□□□ -1.17
RAB3GAP1-207ENST00000539493 HSP90AA2PQ14568 343 aaPredicted RBP7.76□□□□□ -1.17
RAB3GAP1-207ENST00000539493 BRPF3Q9ULD4 1205 aa7.76□□□□□ -1.17
RAB3GAP1-207ENST00000539493 PRG4Q92954 1404 aaPredicted RBP7.76□□□□□ -1.17
RAB3GAP1-207ENST00000539493 TROQ12816 1431 aaPredicted RBP7.75□□□□□ -1.17
RAB3GAP1-207ENST00000539493 SIN3AQ96ST3 1273 aa7.75□□□□□ -1.17
RAB3GAP1-207ENST00000539493 AKNAQ7Z591 1439 aa7.75□□□□□ -1.17
RAB3GAP1-207ENST00000539493 ABCA8O94911 1581 aa7.75□□□□□ -1.17
RAB3GAP1-207ENST00000539493 CHD1O14646 1710 aa7.74□□□□□ -1.17
RAB3GAP1-207ENST00000539493 GCC2Q8IWJ2 1684 aa7.74□□□□□ -1.17
RAB3GAP1-207ENST00000539493 CHIC2Q9UKJ5 165 aa7.74□□□□□ -1.17
RAB3GAP1-207ENST00000539493 ADCY10Q96PN6 1610 aa7.73□□□□□ -1.17
RAB3GAP1-207ENST00000539493 RRP7BPQ9NSQ0 103 aa7.73□□□□□ -1.17
RAB3GAP1-207ENST00000539493 CCER2I3L3R5 266 aa7.73□□□□□ -1.17
RAB3GAP1-207ENST00000539493 BRD2P25440 801 aaKnown RBP7.73□□□□□ -1.17
RAB3GAP1-207ENST00000539493 PPP4R2Q9NY27 417 aa7.73□□□□□ -1.17
RAB3GAP1-207ENST00000539493 KIF14Q15058 1648 aa7.73□□□□□ -1.17
RAB3GAP1-207ENST00000539493 DAPK1P53355 1430 aa7.73□□□□□ -1.17
RAB3GAP1-207ENST00000539493 DNMT1P26358 1616 aaKnown RBP7.72□□□□□ -1.17
RAB3GAP1-207ENST00000539493 GSE1Q14687 1217 aa7.72□□□□□ -1.17
RAB3GAP1-207ENST00000539493 IPO4Q8TEX9 1081 aaKnown RBP7.72□□□□□ -1.17
RAB3GAP1-207ENST00000539493 ZNF644Q9H582 1327 aaPredicted RBP7.72□□□□□ -1.17
RAB3GAP1-207ENST00000539493 ABCC5O15440 1437 aa7.72□□□□□ -1.17
RAB3GAP1-207ENST00000539493 ATP10BO94823 1461 aa7.72□□□□□ -1.17
RAB3GAP1-207ENST00000539493 GPATCH8Q9UKJ3 1502 aaKnown RBP7.72□□□□□ -1.17
RAB3GAP1-207ENST00000539493 KDM6BO15054 1643 aa7.71□□□□□ -1.17
RAB3GAP1-207ENST00000539493 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
RAB3GAP1-207ENST00000539493 ITSN2Q9NZM3 1697 aa7.71□□□□□ -1.18
RAB3GAP1-207ENST00000539493 ROCK1Q13464 1354 aa7.71□□□□□ -1.18
RAB3GAP1-207ENST00000539493 PTPRGP23470 1445 aa7.71□□□□□ -1.18
RAB3GAP1-207ENST00000539493 SHROOM2Q13796 1616 aa7.71□□□□□ -1.18
RAB3GAP1-207ENST00000539493 ZBTB47Q9UFB7 747 aaPredicted RBP7.71□□□□□ -1.18
RAB3GAP1-207ENST00000539493 CAMSAP2Q08AD1 1489 aa7.7□□□□□ -1.18
RAB3GAP1-207ENST00000539493 NEFMP07197 916 aa7.7□□□□□ -1.18
RAB3GAP1-207ENST00000539493 HOMEZQ8IX15 550 aa7.7□□□□□ -1.18
RAB3GAP1-207ENST00000539493 NAP1L2Q9ULW6 460 aaPredicted RBP7.7□□□□□ -1.18
RAB3GAP1-207ENST00000539493 DENND4BO75064 1496 aaPredicted RBP7.7□□□□□ -1.18
RAB3GAP1-207ENST00000539493 PLEKHD1A6NEE1 506 aa7.69□□□□□ -1.18
RAB3GAP1-207ENST00000539493 CFDP1Q9UEE9 299 aaPredicted RBP7.69□□□□□ -1.18
RAB3GAP1-207ENST00000539493 CHRM1P11229 460 aaPredicted RBP7.69□□□□□ -1.18
RAB3GAP1-207ENST00000539493 ANP32AP39687 249 aaKnown RBP7.69□□□□□ -1.18
RAB3GAP1-207ENST00000539493 ABCC10Q5T3U5 1492 aa7.69□□□□□ -1.18
RAB3GAP1-207ENST00000539493 HSP90AA1P07900 732 aaKnown RBP7.68□□□□□ -1.18
RAB3GAP1-207ENST00000539493 GTF2E1P29083 439 aaPredicted RBP7.68□□□□□ -1.18
RAB3GAP1-207ENST00000539493 PPP1R15AO75807 674 aaPredicted RBP7.68□□□□□ -1.18
RAB3GAP1-207ENST00000539493 TONSLQ96HA7 1378 aa7.67□□□□□ -1.18
RAB3GAP1-207ENST00000539493 ERCC6L2Q5T890 1561 aa7.67□□□□□ -1.18
RAB3GAP1-207ENST00000539493 TRIM52Q96A61 297 aa7.67□□□□□ -1.18
RAB3GAP1-207ENST00000539493 PDCL3Q9H2J4 239 aa7.67□□□□□ -1.18
RAB3GAP1-207ENST00000539493 CDC42BPAQ5VT25 1732 aa7.66□□□□□ -1.18
RAB3GAP1-207ENST00000539493 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
RAB3GAP1-207ENST00000539493 KCNH8Q96L42 1107 aa7.66□□□□□ -1.18
RAB3GAP1-207ENST00000539493 CROCC2H7BZ55 1655 aa7.66□□□□□ -1.18
RAB3GAP1-207ENST00000539493 CLASP1Q7Z460 1538 aa7.65□□□□□ -1.18
RAB3GAP1-207ENST00000539493 ADGRL2O95490 1459 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms