RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ZFYVE16Q7Z3T8 1539 aa22.85■■□□□ 1.25
CCND1-204ENST00000539241 CLIP1P30622 1438 aa22.84■■□□□ 1.25
CCND1-204ENST00000539241 MADDQ8WXG6 1647 aa22.83■■□□□ 1.25
CCND1-204ENST00000539241 KIF14Q15058 1648 aa22.82■■□□□ 1.24
CCND1-204ENST00000539241 CASKIN1Q8WXD9 1431 aa22.8■■□□□ 1.24
CCND1-204ENST00000539241 MYO5CQ9NQX4 1742 aa22.78■■□□□ 1.24
CCND1-204ENST00000539241 CCDC18Q5T9S5 1454 aa22.77■■□□□ 1.24
CCND1-204ENST00000539241 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
CCND1-204ENST00000539241 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
CCND1-204ENST00000539241 MLECQ14165 292 aa22.75■■□□□ 1.23
CCND1-204ENST00000539241 LRRIQ1Q96JM4 1722 aa22.74■■□□□ 1.23
CCND1-204ENST00000539241 ATP10AO60312 1499 aa22.73■■□□□ 1.23
CCND1-204ENST00000539241 ZNF518AQ6AHZ1 1483 aa22.73■■□□□ 1.23
CCND1-204ENST00000539241 RIMS1Q86UR5 1692 aaKnown RBP22.73■■□□□ 1.23
CCND1-204ENST00000539241 SIGLEC1Q9BZZ2 1709 aa22.72■■□□□ 1.23
CCND1-204ENST00000539241 AFAP1Q8N556 730 aa22.72■■□□□ 1.23
CCND1-204ENST00000539241 C9orf84Q5VXU9 1444 aa22.72■■□□□ 1.23
CCND1-204ENST00000539241 PLPPR3Q6T4P5 718 aa22.71■■□□□ 1.23
CCND1-204ENST00000539241 FYCO1Q9BQS8 1478 aa22.7■■□□□ 1.22
CCND1-204ENST00000539241 LMTK3Q96Q04 1460 aa22.69■■□□□ 1.22
CCND1-204ENST00000539241 MYT1LQ9UL68 1186 aa22.67■■□□□ 1.22
CCND1-204ENST00000539241 KDM5CP41229 1560 aa22.67■■□□□ 1.22
CCND1-204ENST00000539241 ARHGEF12Q9NZN5 1544 aa22.63■■□□□ 1.21
CCND1-204ENST00000539241 CDC42BPBQ9Y5S2 1711 aa22.62■■□□□ 1.21
CCND1-204ENST00000539241 PREX2Q70Z35 1606 aa22.62■■□□□ 1.21
CCND1-204ENST00000539241 TRAPPC8Q9Y2L5 1435 aa22.62■■□□□ 1.21
CCND1-204ENST00000539241 ABCC1P33527 1531 aa22.62■■□□□ 1.21
CCND1-204ENST00000539241 MLH3Q9UHC1 1453 aa22.6■■□□□ 1.21
CCND1-204ENST00000539241 HSPA2P54652 639 aa22.6■■□□□ 1.21
CCND1-204ENST00000539241 FER1L4A9Z1Z3 1794 aa22.59■■□□□ 1.21
CCND1-204ENST00000539241 DIP2CQ9Y2E4 1556 aa22.59■■□□□ 1.21
CCND1-204ENST00000539241 ZNF777Q9ULD5 760 aaPredicted RBP22.56■■□□□ 1.2
CCND1-204ENST00000539241 REREQ9P2R6 1566 aa22.55■■□□□ 1.2
CCND1-204ENST00000539241 GPATCH8Q9UKJ3 1502 aaKnown RBP22.54■■□□□ 1.2
CCND1-204ENST00000539241 CEBPAP49715 358 aaPredicted RBP22.54■■□□□ 1.2
CCND1-204ENST00000539241 ABCA6Q8N139 1617 aa22.53■■□□□ 1.2
CCND1-204ENST00000539241 FBXO41Q8TF61 875 aa22.53■■□□□ 1.2
CCND1-204ENST00000539241 CDC42BPAQ5VT25 1732 aa22.53■■□□□ 1.2
CCND1-204ENST00000539241 ITSN2Q9NZM3 1697 aa22.52■■□□□ 1.2
CCND1-204ENST00000539241 MTUS2Q5JR59 1369 aa22.51■■□□□ 1.19
CCND1-204ENST00000539241 AGLP35573 1532 aa22.5■■□□□ 1.19
CCND1-204ENST00000539241 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
CCND1-204ENST00000539241 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
CCND1-204ENST00000539241 SAMD9LQ8IVG5 1584 aa22.48■■□□□ 1.19
CCND1-204ENST00000539241 HNRNPMP52272 730 aaKnown RBP eCLIP22.48■■□□□ 1.19
CCND1-204ENST00000539241 SYCP2Q9BX26 1530 aa22.47■■□□□ 1.19
CCND1-204ENST00000539241 SPAG9O60271 1321 aaKnown RBP22.47■■□□□ 1.19
CCND1-204ENST00000539241 CEP162Q5TB80 1403 aa22.47■■□□□ 1.19
CCND1-204ENST00000539241 ESF1Q9H501 851 aaKnown RBP22.46■■□□□ 1.19
CCND1-204ENST00000539241 KIAA1107Q9UPP5 1409 aa22.46■■□□□ 1.19
CCND1-204ENST00000539241 KIDINS220Q9ULH0 1771 aa22.45■■□□□ 1.19
CCND1-204ENST00000539241 PLEKHH2Q8IVE3 1493 aa22.44■■□□□ 1.18
CCND1-204ENST00000539241 UHRF1BP1Q6BDS2 1440 aa22.42■■□□□ 1.18
CCND1-204ENST00000539241 PREX1Q8TCU6 1659 aa22.4■■□□□ 1.18
CCND1-204ENST00000539241 EHBP1L1Q8N3D4 1523 aa22.4■■□□□ 1.18
CCND1-204ENST00000539241 CNTLNQ9NXG0 1405 aa22.39■■□□□ 1.17
CCND1-204ENST00000539241 ATP7AQ04656 1500 aa22.37■■□□□ 1.17
CCND1-204ENST00000539241 TIAM1Q13009 1591 aa22.36■■□□□ 1.17
CCND1-204ENST00000539241 ZNF644Q9H582 1327 aaPredicted RBP22.35■■□□□ 1.17
CCND1-204ENST00000539241 A2MP01023 1474 aa22.34■■□□□ 1.17
CCND1-204ENST00000539241 C3P01024 1663 aa22.33■■□□□ 1.17
CCND1-204ENST00000539241 INO80Q9ULG1 1556 aaPredicted RBP22.33■■□□□ 1.16
CCND1-204ENST00000539241 SETD1BQ9UPS6 1966 aaKnown RBP22.32■■□□□ 1.16
CCND1-204ENST00000539241 MBD5Q9P267 1494 aa22.31■■□□□ 1.16
CCND1-204ENST00000539241 CERKQ8TCT0 537 aa22.31■■□□□ 1.16
CCND1-204ENST00000539241 DMRT2Q9Y5R5 561 aa22.31■■□□□ 1.16
CCND1-204ENST00000539241 PLXNC1O60486 1568 aa22.3■■□□□ 1.16
CCND1-204ENST00000539241 ZMYM3Q14202 1370 aa22.29■■□□□ 1.16
CCND1-204ENST00000539241 NCOA2Q15596 1464 aa22.28■■□□□ 1.16
CCND1-204ENST00000539241 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
CCND1-204ENST00000539241 NPATQ14207 1427 aa22.27■■□□□ 1.16
CCND1-204ENST00000539241 GGT6Q6P531 493 aa22.27■■□□□ 1.16
CCND1-204ENST00000539241 SUPT6HQ7KZ85 1726 aaKnown RBP22.27■■□□□ 1.16
CCND1-204ENST00000539241 RTEL1-TNFRSF6BF6WH68 1400 aa22.25■■□□□ 1.15
CCND1-204ENST00000539241 STRCQ7RTU9 1775 aa22.24■■□□□ 1.15
CCND1-204ENST00000539241 MROH2AA6NES4 1674 aa22.23■■□□□ 1.15
CCND1-204ENST00000539241 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
CCND1-204ENST00000539241 PPP6R1Q9UPN7 881 aa22.22■■□□□ 1.15
CCND1-204ENST00000539241 PTPRTO14522 1441 aa22.22■■□□□ 1.15
CCND1-204ENST00000539241 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
CCND1-204ENST00000539241 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
CCND1-204ENST00000539241 CAMSAP2Q08AD1 1489 aa22.21■■□□□ 1.15
CCND1-204ENST00000539241 RSPH4AQ5TD94 716 aa22.2■■□□□ 1.14
CCND1-204ENST00000539241 NCOA1Q15788 1441 aa22.2■■□□□ 1.14
CCND1-204ENST00000539241 ADGBQ8N7X0 1667 aa22.19■■□□□ 1.14
CCND1-204ENST00000539241 PTPRKQ15262 1439 aa22.18■■□□□ 1.14
CCND1-204ENST00000539241 CLTCQ00610 1675 aaKnown RBP22.17■■□□□ 1.14
CCND1-204ENST00000539241 LRRC9Q6ZRR7 1453 aa22.17■■□□□ 1.14
CCND1-204ENST00000539241 KIF3BO15066 747 aa22.14■■□□□ 1.13
CCND1-204ENST00000539241 TSPY4P0CV99 314 aa22.13■■□□□ 1.13
CCND1-204ENST00000539241 TSPY10P0CW01 314 aa22.13■■□□□ 1.13
CCND1-204ENST00000539241 CAMSAP1Q5T5Y3 1602 aa22.13■■□□□ 1.13
CCND1-204ENST00000539241 KANK4Q5T7N3 995 aaPredicted RBP22.11■■□□□ 1.13
CCND1-204ENST00000539241 ARHGEF5Q12774 1597 aa22.1■■□□□ 1.13
CCND1-204ENST00000539241 NCKAP5LQ9HCH0 1330 aa22.09■■□□□ 1.13
CCND1-204ENST00000539241 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
CCND1-204ENST00000539241 MYO3AQ8NEV4 1616 aa22.09■■□□□ 1.13
CCND1-204ENST00000539241 PKD2Q13563 968 aa22.07■■□□□ 1.12
CCND1-204ENST00000539241 PLA2R1Q13018 1463 aa22.07■■□□□ 1.12
CCND1-204ENST00000539241 CEP170BQ9Y4F5 1589 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms