RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 CAMSAP2Q08AD1 1489 aa29.32■■■□□ 2.28
EFCAB11-202ENST00000538485 MYO5CQ9NQX4 1742 aa29.3■■■□□ 2.28
EFCAB11-202ENST00000538485 PLCH2O75038 1416 aa29.25■■■□□ 2.27
EFCAB11-202ENST00000538485 MAPKBP1O60336 1514 aa29.25■■■□□ 2.27
EFCAB11-202ENST00000538485 ARHGAP5Q13017 1502 aa29.24■■■□□ 2.27
EFCAB11-202ENST00000538485 ABCA9Q8IUA7 1624 aa29.24■■■□□ 2.27
EFCAB11-202ENST00000538485 DNMT1P26358 1616 aaKnown RBP29.23■■■□□ 2.27
EFCAB11-202ENST00000538485 DAPK1P53355 1430 aa29.22■■■□□ 2.27
EFCAB11-202ENST00000538485 ABCC5O15440 1437 aa29.21■■■□□ 2.27
EFCAB11-202ENST00000538485 SAMD9LQ8IVG5 1584 aa29.21■■■□□ 2.27
EFCAB11-202ENST00000538485 CHIC2Q9UKJ5 165 aa29.17■■■□□ 2.26
EFCAB11-202ENST00000538485 SETD5Q9C0A6 1442 aa29.16■■■□□ 2.26
EFCAB11-202ENST00000538485 ARAP3Q8WWN8 1544 aa29.15■■■□□ 2.26
EFCAB11-202ENST00000538485 EFCAB2Q5VUJ9 269 aa29.14■■■□□ 2.26
EFCAB11-202ENST00000538485 RAB3GAP2Q9H2M9 1393 aa29.13■■■□□ 2.25
EFCAB11-202ENST00000538485 MBD5Q9P267 1494 aa29.13■■■□□ 2.25
EFCAB11-202ENST00000538485 HNRNPMP52272 730 aaKnown RBP eCLIP29.12■■■□□ 2.25
EFCAB11-202ENST00000538485 HFM1A2PYH4 1435 aa29.12■■■□□ 2.25
EFCAB11-202ENST00000538485 SYCP2Q9BX26 1530 aa29.09■■■□□ 2.25
EFCAB11-202ENST00000538485 CROCC2H7BZ55 1655 aa29.09■■■□□ 2.25
EFCAB11-202ENST00000538485 ARHGEF5Q12774 1597 aa29.09■■■□□ 2.25
EFCAB11-202ENST00000538485 CCER1Q8TC90 406 aaPredicted RBP29.08■■■□□ 2.25
EFCAB11-202ENST00000538485 NAIPQ13075 1403 aa29.08■■■□□ 2.25
EFCAB11-202ENST00000538485 AKNAQ7Z591 1439 aa29.08■■■□□ 2.25
EFCAB11-202ENST00000538485 RRP7BPQ9NSQ0 103 aa29.08■■■□□ 2.25
EFCAB11-202ENST00000538485 KIAA1107Q9UPP5 1409 aa29.07■■■□□ 2.24
EFCAB11-202ENST00000538485 PLEKHH2Q8IVE3 1493 aa29.07■■■□□ 2.24
EFCAB11-202ENST00000538485 CD109Q6YHK3 1445 aa29.06■■■□□ 2.24
EFCAB11-202ENST00000538485 FANCAO15360 1455 aa29.06■■■□□ 2.24
EFCAB11-202ENST00000538485 ROCK1Q13464 1354 aa29.06■■■□□ 2.24
EFCAB11-202ENST00000538485 ARHGEF12Q9NZN5 1544 aa29.05■■■□□ 2.24
EFCAB11-202ENST00000538485 CCDC141Q6ZP82 1450 aa29.03■■■□□ 2.24
EFCAB11-202ENST00000538485 RSPH4AQ5TD94 716 aa29.03■■■□□ 2.24
EFCAB11-202ENST00000538485 ABCC1P33527 1531 aa29.03■■■□□ 2.24
EFCAB11-202ENST00000538485 HRCP23327 699 aa29.02■■■□□ 2.24
EFCAB11-202ENST00000538485 SHANK2Q9UPX8 1470 aa29.01■■■□□ 2.24
EFCAB11-202ENST00000538485 TSPY4P0CV99 314 aa29■■■□□ 2.23
EFCAB11-202ENST00000538485 TSPY10P0CW01 314 aa29■■■□□ 2.23
EFCAB11-202ENST00000538485 GLI2P10070 1586 aa29■■■□□ 2.23
EFCAB11-202ENST00000538485 GCC2Q8IWJ2 1684 aa29■■■□□ 2.23
EFCAB11-202ENST00000538485 NCOA1Q15788 1441 aa28.99■■■□□ 2.23
EFCAB11-202ENST00000538485 C9orf84Q5VXU9 1444 aa28.99■■■□□ 2.23
EFCAB11-202ENST00000538485 DIP2BQ9P265 1576 aa28.99■■■□□ 2.23
EFCAB11-202ENST00000538485 ADGBQ8N7X0 1667 aa28.99■■■□□ 2.23
EFCAB11-202ENST00000538485 ADGRL2O95490 1459 aa28.98■■■□□ 2.23
EFCAB11-202ENST00000538485 MAP3K4Q9Y6R4 1608 aa28.97■■■□□ 2.23
EFCAB11-202ENST00000538485 DNAJC5Q9H3Z4 198 aa28.96■■■□□ 2.23
EFCAB11-202ENST00000538485 FAM69CQ0P6D2 419 aa28.95■■■□□ 2.23
EFCAB11-202ENST00000538485 DHX57Q6P158 1386 aaKnown RBP28.94■■■□□ 2.22
EFCAB11-202ENST00000538485 TRAPPC8Q9Y2L5 1435 aa28.94■■■□□ 2.22
EFCAB11-202ENST00000538485 ANKRD30AQ9BXX3 1397 aa28.94■■■□□ 2.22
EFCAB11-202ENST00000538485 ADGRL1O94910 1474 aa28.93■■■□□ 2.22
EFCAB11-202ENST00000538485 KDM6BO15054 1643 aa28.92■■■□□ 2.22
EFCAB11-202ENST00000538485 SCAPERQ9BY12 1400 aa28.89■■■□□ 2.22
EFCAB11-202ENST00000538485 CFAP74Q9C0B2 1584 aa28.89■■■□□ 2.22
EFCAB11-202ENST00000538485 MAST1Q9Y2H9 1570 aa28.89■■■□□ 2.22
EFCAB11-202ENST00000538485 AFAP1Q8N556 730 aa28.87■■■□□ 2.21
EFCAB11-202ENST00000538485 NEO1Q92859 1461 aa28.84■■■□□ 2.21
EFCAB11-202ENST00000538485 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
EFCAB11-202ENST00000538485 KIF15Q9NS87 1388 aa28.82■■■□□ 2.2
EFCAB11-202ENST00000538485 ZEB1P37275 1124 aaPredicted RBP28.8■■■□□ 2.2
EFCAB11-202ENST00000538485 ANKRD50Q9ULJ7 1429 aa28.8■■■□□ 2.2
EFCAB11-202ENST00000538485 SPAG9O60271 1321 aaKnown RBP28.79■■■□□ 2.2
EFCAB11-202ENST00000538485 PLXNC1O60486 1568 aa28.78■■■□□ 2.2
EFCAB11-202ENST00000538485 TSPOAP1O95153 1857 aa28.78■■■□□ 2.2
EFCAB11-202ENST00000538485 PPRC1Q5VV67 1664 aaKnown RBP28.76■■■□□ 2.2
EFCAB11-202ENST00000538485 RTEL1-TNFRSF6BF6WH68 1400 aa28.76■■■□□ 2.19
EFCAB11-202ENST00000538485 ZFYVE16Q7Z3T8 1539 aa28.76■■■□□ 2.19
EFCAB11-202ENST00000538485 ZNF518AQ6AHZ1 1483 aa28.76■■■□□ 2.19
EFCAB11-202ENST00000538485 CLSPNQ9HAW4 1339 aa28.74■■■□□ 2.19
EFCAB11-202ENST00000538485 POGZQ7Z3K3 1410 aa28.74■■■□□ 2.19
EFCAB11-202ENST00000538485 TRIM52Q96A61 297 aa28.73■■■□□ 2.19
EFCAB11-202ENST00000538485 INO80Q9ULG1 1556 aaPredicted RBP28.72■■■□□ 2.19
EFCAB11-202ENST00000538485 ATP7AQ04656 1500 aa28.7■■■□□ 2.19
EFCAB11-202ENST00000538485 ACIN1Q9UKV3 1341 aaKnown RBP28.69■■■□□ 2.18
EFCAB11-202ENST00000538485 KDM5CP41229 1560 aa28.69■■■□□ 2.18
EFCAB11-202ENST00000538485 TEX14Q8IWB6 1497 aa28.69■■■□□ 2.18
EFCAB11-202ENST00000538485 DENND4BO75064 1496 aaPredicted RBP28.68■■■□□ 2.18
EFCAB11-202ENST00000538485 RAPGEF3O95398 923 aa28.68■■■□□ 2.18
EFCAB11-202ENST00000538485 DUOX2Q9NRD8 1548 aa28.67■■■□□ 2.18
EFCAB11-202ENST00000538485 KIDINS220Q9ULH0 1771 aa28.65■■■□□ 2.18
EFCAB11-202ENST00000538485 MYT1LQ9UL68 1186 aa28.64■■■□□ 2.18
EFCAB11-202ENST00000538485 RICTORQ6R327 1708 aa28.63■■■□□ 2.17
EFCAB11-202ENST00000538485 MPHOSPH9Q99550 1183 aa28.62■■■□□ 2.17
EFCAB11-202ENST00000538485 MLH3Q9UHC1 1453 aa28.62■■■□□ 2.17
EFCAB11-202ENST00000538485 ERBINQ96RT1 1412 aa28.61■■■□□ 2.17
EFCAB11-202ENST00000538485 HECW2Q9P2P5 1572 aa28.59■■■□□ 2.17
EFCAB11-202ENST00000538485 PZPP20742 1482 aa28.57■■■□□ 2.16
EFCAB11-202ENST00000538485 FRMPD1Q5SYB0 1578 aa28.56■■■□□ 2.16
EFCAB11-202ENST00000538485 NUP155O75694 1391 aa28.56■■■□□ 2.16
EFCAB11-202ENST00000538485 SLC4A1APQ9BWU0 796 aaKnown RBP28.55■■■□□ 2.16
EFCAB11-202ENST00000538485 DHX29Q7Z478 1369 aaKnown RBP28.53■■■□□ 2.16
EFCAB11-202ENST00000538485 KDM5DQ9BY66 1539 aa28.52■■■□□ 2.16
EFCAB11-202ENST00000538485 UNC13BO14795 1591 aa28.51■■■□□ 2.16
EFCAB11-202ENST00000538485 TRHP20396 242 aaPredicted RBP28.51■■■□□ 2.15
EFCAB11-202ENST00000538485 SIN3AQ96ST3 1273 aa28.5■■■□□ 2.15
EFCAB11-202ENST00000538485 ABCA6Q8N139 1617 aa28.5■■■□□ 2.15
EFCAB11-202ENST00000538485 COL17A1Q9UMD9 1497 aaPredicted RBP28.49■■■□□ 2.15
EFCAB11-202ENST00000538485 FOXD1Q16676 465 aa28.49■■■□□ 2.15
EFCAB11-202ENST00000538485 A2MP01023 1474 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms