RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 CDC42BPBQ9Y5S2 1711 aa36.37■■■■□ 3.41
CLTA-209ENST00000538225 PREX2Q70Z35 1606 aa36.36■■■■□ 3.41
CLTA-209ENST00000538225 FRMPD1Q5SYB0 1578 aa36.35■■■■□ 3.41
CLTA-209ENST00000538225 CDC42BPAQ5VT25 1732 aa36.34■■■■□ 3.41
CLTA-209ENST00000538225 CCNB3Q8WWL7 1395 aa36.33■■■■□ 3.41
CLTA-209ENST00000538225 GPATCH8Q9UKJ3 1502 aaKnown RBP36.33■■■■□ 3.41
CLTA-209ENST00000538225 APLP2Q06481 763 aa36.3■■■■□ 3.4
CLTA-209ENST00000538225 RICTORQ6R327 1708 aa36.29■■■■□ 3.4
CLTA-209ENST00000538225 ZNF777Q9ULD5 760 aaPredicted RBP36.29■■■■□ 3.4
CLTA-209ENST00000538225 KANK4Q5T7N3 995 aaPredicted RBP36.28■■■■□ 3.4
CLTA-209ENST00000538225 LRRC9Q6ZRR7 1453 aa36.28■■■■□ 3.4
CLTA-209ENST00000538225 MAP3K1Q13233 1512 aa36.28■■■■□ 3.4
CLTA-209ENST00000538225 CFDP1Q9UEE9 299 aaPredicted RBP36.26■■■■□ 3.4
CLTA-209ENST00000538225 POGZQ7Z3K3 1410 aa36.25■■■■□ 3.39
CLTA-209ENST00000538225 NCOA2Q15596 1464 aa36.22■■■■□ 3.39
CLTA-209ENST00000538225 SUPT6HQ7KZ85 1726 aaKnown RBP36.22■■■■□ 3.39
CLTA-209ENST00000538225 AFAP1Q8N556 730 aa36.19■■■■□ 3.38
CLTA-209ENST00000538225 ABCC1P33527 1531 aa36.17■■■■□ 3.38
CLTA-209ENST00000538225 ZMYM4Q5VZL5 1548 aa36.16■■■■□ 3.38
CLTA-209ENST00000538225 ARHGEF12Q9NZN5 1544 aa36.16■■■■□ 3.38
CLTA-209ENST00000538225 KDM4FA0A1W2PPD8 638 aa36.15■■■■□ 3.38
CLTA-209ENST00000538225 SAMD9LQ8IVG5 1584 aa36.15■■■■□ 3.38
CLTA-209ENST00000538225 ZNF518AQ6AHZ1 1483 aa36.14■■■■□ 3.38
CLTA-209ENST00000538225 AEBP2Q6ZN18 517 aaPredicted RBP36.13■■■■□ 3.37
CLTA-209ENST00000538225 TRAPPC8Q9Y2L5 1435 aa36.12■■■■□ 3.37
CLTA-209ENST00000538225 ITSN2Q9NZM3 1697 aa36.11■■■■□ 3.37
CLTA-209ENST00000538225 HNRNPMP52272 730 aaKnown RBP eCLIP36.11■■■■□ 3.37
CLTA-209ENST00000538225 YEATS2Q9ULM3 1422 aa36.1■■■■□ 3.37
CLTA-209ENST00000538225 MYT1LQ9UL68 1186 aa36.1■■■■□ 3.37
CLTA-209ENST00000538225 MAGI2Q86UL8 1455 aa36.1■■■■□ 3.37
CLTA-209ENST00000538225 ZNF644Q9H582 1327 aaPredicted RBP36.09■■■■□ 3.37
CLTA-209ENST00000538225 ZFYVE16Q7Z3T8 1539 aa36.09■■■■□ 3.37
CLTA-209ENST00000538225 ARHGEF40Q8TER5 1519 aa36.08■■■■□ 3.37
CLTA-209ENST00000538225 SYCP2Q9BX26 1530 aa36.06■■■■□ 3.36
CLTA-209ENST00000538225 KDM5CP41229 1560 aa36.05■■■■□ 3.36
CLTA-209ENST00000538225 PLEKHH2Q8IVE3 1493 aa36.04■■■■□ 3.36
CLTA-209ENST00000538225 KIAA1107Q9UPP5 1409 aa36.03■■■■□ 3.36
CLTA-209ENST00000538225 ARID4BQ4LE39 1312 aaPredicted RBP36.03■■■■□ 3.36
CLTA-209ENST00000538225 HECW2Q9P2P5 1572 aa35.97■■■■□ 3.35
CLTA-209ENST00000538225 MLH3Q9UHC1 1453 aa35.95■■■■□ 3.35
CLTA-209ENST00000538225 ATP10AO60312 1499 aa35.94■■■■□ 3.34
CLTA-209ENST00000538225 CAMSAP2Q08AD1 1489 aa35.92■■■■□ 3.34
CLTA-209ENST00000538225 SPAG9O60271 1321 aaKnown RBP35.92■■■■□ 3.34
CLTA-209ENST00000538225 MYOM3Q5VTT5 1437 aa35.91■■■■□ 3.34
CLTA-209ENST00000538225 MBD5Q9P267 1494 aa35.9■■■■□ 3.34
CLTA-209ENST00000538225 C9orf84Q5VXU9 1444 aa35.88■■■■□ 3.33
CLTA-209ENST00000538225 SIGLEC1Q9BZZ2 1709 aa35.86■■■■□ 3.33
CLTA-209ENST00000538225 DIP2CQ9Y2E4 1556 aa35.85■■■■□ 3.33
CLTA-209ENST00000538225 KIDINS220Q9ULH0 1771 aa35.85■■■■□ 3.33
CLTA-209ENST00000538225 MIA2Q96PC5 1412 aa35.84■■■■□ 3.33
CLTA-209ENST00000538225 ABCA6Q8N139 1617 aa35.84■■■■□ 3.33
CLTA-209ENST00000538225 MLECQ14165 292 aa35.81■■■■□ 3.32
CLTA-209ENST00000538225 BCORL1Q5H9F3 1711 aa35.8■■■■□ 3.32
CLTA-209ENST00000538225 RSPH4AQ5TD94 716 aa35.79■■■■□ 3.32
CLTA-209ENST00000538225 ATP7AQ04656 1500 aa35.78■■■■□ 3.32
CLTA-209ENST00000538225 PPARGC1BQ86YN6 1023 aaKnown RBP35.77■■■■□ 3.32
CLTA-209ENST00000538225 CCDC141Q6ZP82 1450 aa35.77■■■■□ 3.32
CLTA-209ENST00000538225 ADAMTSL3P82987 1691 aa35.76■■■■□ 3.32
CLTA-209ENST00000538225 INO80Q9ULG1 1556 aaPredicted RBP35.76■■■■□ 3.31
CLTA-209ENST00000538225 ARHGEF5Q12774 1597 aa35.72■■■■□ 3.31
CLTA-209ENST00000538225 REREQ9P2R6 1566 aa35.72■■■■□ 3.31
CLTA-209ENST00000538225 FGD6Q6ZV73 1430 aa35.71■■■■□ 3.31
CLTA-209ENST00000538225 TSPY4P0CV99 314 aa35.7■■■■□ 3.31
CLTA-209ENST00000538225 TSPY10P0CW01 314 aa35.7■■■■□ 3.31
CLTA-209ENST00000538225 PTPN23Q9H3S7 1636 aa35.69■■■■□ 3.3
CLTA-209ENST00000538225 RTEL1-TNFRSF6BF6WH68 1400 aa35.69■■■■□ 3.3
CLTA-209ENST00000538225 MADDQ8WXG6 1647 aa35.68■■■■□ 3.3
CLTA-209ENST00000538225 A2MP01023 1474 aa35.63■■■■□ 3.29
CLTA-209ENST00000538225 AGLP35573 1532 aa35.62■■■■□ 3.29
CLTA-209ENST00000538225 PTPRMP28827 1452 aa35.61■■■■□ 3.29
CLTA-209ENST00000538225 TCOF1Q13428 1488 aaKnown RBP35.6■■■■□ 3.29
CLTA-209ENST00000538225 RIMS1Q86UR5 1692 aaKnown RBP35.59■■■■□ 3.29
CLTA-209ENST00000538225 ADGBQ8N7X0 1667 aa35.57■■■■□ 3.28
CLTA-209ENST00000538225 FAM50AQ14320 339 aaKnown RBP35.57■■■■□ 3.28
CLTA-209ENST00000538225 PLPPR3Q6T4P5 718 aa35.56■■■■□ 3.28
CLTA-209ENST00000538225 ABCC5O15440 1437 aa35.55■■■■□ 3.28
CLTA-209ENST00000538225 PLXNC1O60486 1568 aa35.54■■■■□ 3.28
CLTA-209ENST00000538225 FER1L4A9Z1Z3 1794 aa35.53■■■■□ 3.28
CLTA-209ENST00000538225 DHX29Q7Z478 1369 aaKnown RBP35.52■■■■□ 3.28
CLTA-209ENST00000538225 MAST1Q9Y2H9 1570 aa35.51■■■■□ 3.28
CLTA-209ENST00000538225 DAPK1P53355 1430 aa35.5■■■■□ 3.27
CLTA-209ENST00000538225 ESF1Q9H501 851 aaKnown RBP35.48■■■■□ 3.27
CLTA-209ENST00000538225 DNMT1P26358 1616 aaKnown RBP35.47■■■■□ 3.27
CLTA-209ENST00000538225 GGT6Q6P531 493 aa35.47■■■■□ 3.27
CLTA-209ENST00000538225 CROCC2H7BZ55 1655 aa35.43■■■■□ 3.26
CLTA-209ENST00000538225 SHANK2Q9UPX8 1470 aa35.43■■■■□ 3.26
CLTA-209ENST00000538225 KIF3BO15066 747 aa35.43■■■■□ 3.26
CLTA-209ENST00000538225 CHIC2Q9UKJ5 165 aa35.43■■■■□ 3.26
CLTA-209ENST00000538225 CEBPAP49715 358 aaPredicted RBP35.41■■■■□ 3.26
CLTA-209ENST00000538225 RRP7BPQ9NSQ0 103 aa35.4■■■■□ 3.26
CLTA-209ENST00000538225 KIF15Q9NS87 1388 aa35.34■■■■□ 3.25
CLTA-209ENST00000538225 CNTLNQ9NXG0 1405 aa35.32■■■■□ 3.25
CLTA-209ENST00000538225 ANKRD30AQ9BXX3 1397 aa35.31■■■■□ 3.24
CLTA-209ENST00000538225 PPP6R1Q9UPN7 881 aa35.3■■■■□ 3.24
CLTA-209ENST00000538225 DUOX2Q9NRD8 1548 aa35.3■■■■□ 3.24
CLTA-209ENST00000538225 ITGAEP38570 1179 aa35.28■■■■□ 3.24
CLTA-209ENST00000538225 NCOA1Q15788 1441 aa35.26■■■■□ 3.24
CLTA-209ENST00000538225 CLTCQ00610 1675 aaKnown RBP35.26■■■■□ 3.23
CLTA-209ENST00000538225 ZMYM3Q14202 1370 aa35.25■■■■□ 3.23
CLTA-209ENST00000538225 PTPRKQ15262 1439 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms