RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 ZNF777Q9ULD5 760 aaPredicted RBP17.7■□□□□ 0.42
SPARC-207ENST00000537849 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
SPARC-207ENST00000537849 PREX2Q70Z35 1606 aa17.69■□□□□ 0.42
SPARC-207ENST00000537849 ABCA9Q8IUA7 1624 aa17.69■□□□□ 0.42
SPARC-207ENST00000537849 PTPRKQ15262 1439 aa17.69■□□□□ 0.42
SPARC-207ENST00000537849 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
SPARC-207ENST00000537849 CAMSAP2Q08AD1 1489 aa17.66■□□□□ 0.42
SPARC-207ENST00000537849 ABCC5O15440 1437 aa17.64■□□□□ 0.42
SPARC-207ENST00000537849 ARAP3Q8WWN8 1544 aa17.64■□□□□ 0.41
SPARC-207ENST00000537849 ARHGAP5Q13017 1502 aa17.63■□□□□ 0.41
SPARC-207ENST00000537849 SAMD9LQ8IVG5 1584 aa17.63■□□□□ 0.41
SPARC-207ENST00000537849 HNRNPMP52272 730 aaKnown RBP eCLIP17.63■□□□□ 0.41
SPARC-207ENST00000537849 GLI2P10070 1586 aa17.62■□□□□ 0.41
SPARC-207ENST00000537849 DAPK1P53355 1430 aa17.61■□□□□ 0.41
SPARC-207ENST00000537849 CD109Q6YHK3 1445 aa17.61■□□□□ 0.41
SPARC-207ENST00000537849 MBD5Q9P267 1494 aa17.61■□□□□ 0.41
SPARC-207ENST00000537849 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
SPARC-207ENST00000537849 KIAA1107Q9UPP5 1409 aa17.59■□□□□ 0.41
SPARC-207ENST00000537849 RSPH4AQ5TD94 716 aa17.59■□□□□ 0.41
SPARC-207ENST00000537849 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
SPARC-207ENST00000537849 FAM69CQ0P6D2 419 aa17.58■□□□□ 0.4
SPARC-207ENST00000537849 ARHGEF5Q12774 1597 aa17.57■□□□□ 0.4
SPARC-207ENST00000537849 ARHGEF12Q9NZN5 1544 aa17.57■□□□□ 0.4
SPARC-207ENST00000537849 PLEKHH2Q8IVE3 1493 aa17.56■□□□□ 0.4
SPARC-207ENST00000537849 AKNAQ7Z591 1439 aa17.56■□□□□ 0.4
SPARC-207ENST00000537849 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
SPARC-207ENST00000537849 DIP2BQ9P265 1576 aa17.55■□□□□ 0.4
SPARC-207ENST00000537849 HRCP23327 699 aa17.55■□□□□ 0.4
SPARC-207ENST00000537849 FANCAO15360 1455 aa17.55■□□□□ 0.4
SPARC-207ENST00000537849 MAP3K4Q9Y6R4 1608 aa17.54■□□□□ 0.4
SPARC-207ENST00000537849 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
SPARC-207ENST00000537849 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
SPARC-207ENST00000537849 TSPY4P0CV99 314 aa17.53■□□□□ 0.4
SPARC-207ENST00000537849 TSPY10P0CW01 314 aa17.53■□□□□ 0.4
SPARC-207ENST00000537849 SYCP2Q9BX26 1530 aa17.52■□□□□ 0.4
SPARC-207ENST00000537849 HFM1A2PYH4 1435 aa17.52■□□□□ 0.4
SPARC-207ENST00000537849 NAIPQ13075 1403 aa17.52■□□□□ 0.4
SPARC-207ENST00000537849 ABCC1P33527 1531 aa17.52■□□□□ 0.39
SPARC-207ENST00000537849 CROCC2H7BZ55 1655 aa17.52■□□□□ 0.39
SPARC-207ENST00000537849 KIF13AQ9H1H9 1805 aa17.51■□□□□ 0.39
SPARC-207ENST00000537849 RAB3GAP2Q9H2M9 1393 aa17.51■□□□□ 0.39
SPARC-207ENST00000537849 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
SPARC-207ENST00000537849 NCOA1Q15788 1441 aa17.5■□□□□ 0.39
SPARC-207ENST00000537849 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
SPARC-207ENST00000537849 ADGRL2O95490 1459 aa17.5■□□□□ 0.39
SPARC-207ENST00000537849 SHANK2Q9UPX8 1470 aa17.49■□□□□ 0.39
SPARC-207ENST00000537849 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
SPARC-207ENST00000537849 AFAP1Q8N556 730 aa17.48■□□□□ 0.39
SPARC-207ENST00000537849 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
SPARC-207ENST00000537849 NEO1Q92859 1461 aa17.47■□□□□ 0.39
SPARC-207ENST00000537849 ADGBQ8N7X0 1667 aa17.46■□□□□ 0.39
SPARC-207ENST00000537849 CFAP74Q9C0B2 1584 aa17.46■□□□□ 0.39
SPARC-207ENST00000537849 MAST1Q9Y2H9 1570 aa17.46■□□□□ 0.39
SPARC-207ENST00000537849 ADGRL1O94910 1474 aa17.46■□□□□ 0.39
SPARC-207ENST00000537849 ANKRD30AQ9BXX3 1397 aa17.46■□□□□ 0.39
SPARC-207ENST00000537849 TSPOAP1O95153 1857 aa17.46■□□□□ 0.38
SPARC-207ENST00000537849 PPRC1Q5VV67 1664 aaKnown RBP17.45■□□□□ 0.38
SPARC-207ENST00000537849 GCC2Q8IWJ2 1684 aa17.44■□□□□ 0.38
SPARC-207ENST00000537849 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
SPARC-207ENST00000537849 KDM6BO15054 1643 aa17.42■□□□□ 0.38
SPARC-207ENST00000537849 SPAG9O60271 1321 aaKnown RBP17.42■□□□□ 0.38
SPARC-207ENST00000537849 RTEL1-TNFRSF6BF6WH68 1400 aa17.41■□□□□ 0.38
SPARC-207ENST00000537849 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
SPARC-207ENST00000537849 KIF15Q9NS87 1388 aa17.38■□□□□ 0.37
SPARC-207ENST00000537849 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
SPARC-207ENST00000537849 TEX14Q8IWB6 1497 aa17.37■□□□□ 0.37
SPARC-207ENST00000537849 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
SPARC-207ENST00000537849 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
SPARC-207ENST00000537849 POGZQ7Z3K3 1410 aa17.36■□□□□ 0.37
SPARC-207ENST00000537849 ANKRD50Q9ULJ7 1429 aa17.36■□□□□ 0.37
SPARC-207ENST00000537849 ZNF518AQ6AHZ1 1483 aa17.36■□□□□ 0.37
SPARC-207ENST00000537849 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
SPARC-207ENST00000537849 KDM5CP41229 1560 aa17.34■□□□□ 0.37
SPARC-207ENST00000537849 KIDINS220Q9ULH0 1771 aa17.33■□□□□ 0.37
SPARC-207ENST00000537849 RICTORQ6R327 1708 aa17.33■□□□□ 0.37
SPARC-207ENST00000537849 INO80Q9ULG1 1556 aaPredicted RBP17.33■□□□□ 0.37
SPARC-207ENST00000537849 ZFYVE16Q7Z3T8 1539 aa17.33■□□□□ 0.37
SPARC-207ENST00000537849 MLH3Q9UHC1 1453 aa17.33■□□□□ 0.37
SPARC-207ENST00000537849 ATP7AQ04656 1500 aa17.32■□□□□ 0.36
SPARC-207ENST00000537849 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
SPARC-207ENST00000537849 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
SPARC-207ENST00000537849 DUOX2Q9NRD8 1548 aa17.31■□□□□ 0.36
SPARC-207ENST00000537849 COL17A1Q9UMD9 1497 aaPredicted RBP17.3■□□□□ 0.36
SPARC-207ENST00000537849 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
SPARC-207ENST00000537849 MYT1LQ9UL68 1186 aa17.29■□□□□ 0.36
SPARC-207ENST00000537849 MPHOSPH9Q99550 1183 aa17.28■□□□□ 0.36
SPARC-207ENST00000537849 FRMPD1Q5SYB0 1578 aa17.28■□□□□ 0.36
SPARC-207ENST00000537849 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
SPARC-207ENST00000537849 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.36
SPARC-207ENST00000537849 HECW2Q9P2P5 1572 aa17.26■□□□□ 0.35
SPARC-207ENST00000537849 ERBINQ96RT1 1412 aa17.25■□□□□ 0.35
SPARC-207ENST00000537849 ZMYM4Q5VZL5 1548 aa17.23■□□□□ 0.35
SPARC-207ENST00000537849 PZPP20742 1482 aa17.23■□□□□ 0.35
SPARC-207ENST00000537849 NUP155O75694 1391 aa17.22■□□□□ 0.35
SPARC-207ENST00000537849 A2MP01023 1474 aa17.21■□□□□ 0.35
SPARC-207ENST00000537849 MAGI2Q86UL8 1455 aa17.21■□□□□ 0.35
SPARC-207ENST00000537849 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
SPARC-207ENST00000537849 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.34
SPARC-207ENST00000537849 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
SPARC-207ENST00000537849 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms