RNA–Protein interactions for RNA: ENST00000537445.5

PDCD2-205, Transcript of programmed cell death 2, humanhuman

TSL 3 BASIC

Gene PDCD2, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-205ENST00000537445 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
PDCD2-205ENST00000537445 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
PDCD2-205ENST00000537445 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
PDCD2-205ENST00000537445 SIGLEC1Q9BZZ2 1709 aa20.36■□□□□ 0.85
PDCD2-205ENST00000537445 HECW1Q76N89 1606 aa20.36■□□□□ 0.85
PDCD2-205ENST00000537445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.36■□□□□ 0.85
PDCD2-205ENST00000537445 HNRNPUL2Q1KMD3 747 aaKnown RBP20.36■□□□□ 0.85
PDCD2-205ENST00000537445 CCDC18Q5T9S5 1454 aa20.36■□□□□ 0.85
PDCD2-205ENST00000537445 ATP1B4Q9UN42 357 aaPredicted RBP20.34■□□□□ 0.85
PDCD2-205ENST00000537445 AKNAQ7Z591 1439 aa20.34■□□□□ 0.85
PDCD2-205ENST00000537445 CERKQ8TCT0 537 aa20.33■□□□□ 0.85
PDCD2-205ENST00000537445 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
PDCD2-205ENST00000537445 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
PDCD2-205ENST00000537445 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
PDCD2-205ENST00000537445 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
PDCD2-205ENST00000537445 ZMYM4Q5VZL5 1548 aa20.3■□□□□ 0.84
PDCD2-205ENST00000537445 FANCAO15360 1455 aa20.3■□□□□ 0.84
PDCD2-205ENST00000537445 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
PDCD2-205ENST00000537445 POGZQ7Z3K3 1410 aa20.28■□□□□ 0.84
PDCD2-205ENST00000537445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■■□□□ 13.9
PDCD2-205ENST00000537445 EHBP1L1Q8N3D4 1523 aa20.27■□□□□ 0.84
PDCD2-205ENST00000537445 PLEKHD1A6NEE1 506 aa20.27■□□□□ 0.84
PDCD2-205ENST00000537445 CFAP74Q9C0B2 1584 aa20.26■□□□□ 0.83
PDCD2-205ENST00000537445 ZFYVE16Q7Z3T8 1539 aa20.26■□□□□ 0.83
PDCD2-205ENST00000537445 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
PDCD2-205ENST00000537445 TTC37Q6PGP7 1564 aa20.25■□□□□ 0.83
PDCD2-205ENST00000537445 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
PDCD2-205ENST00000537445 FER1L4A9Z1Z3 1794 aa20.23■□□□□ 0.83
PDCD2-205ENST00000537445 MLECQ14165 292 aa20.22■□□□□ 0.83
PDCD2-205ENST00000537445 ILDR2Q71H61 639 aa20.21■□□□□ 0.83
PDCD2-205ENST00000537445 SUPT6HQ7KZ85 1726 aaKnown RBP20.21■□□□□ 0.83
PDCD2-205ENST00000537445 LRRIQ1Q96JM4 1722 aa20.19■□□□□ 0.82
PDCD2-205ENST00000537445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.18■□□□□ 0.82
PDCD2-205ENST00000537445 ARHGEF12Q9NZN5 1544 aa20.17■□□□□ 0.82
PDCD2-205ENST00000537445 SCAPERQ9BY12 1400 aa20.16■□□□□ 0.82
PDCD2-205ENST00000537445 PREX1Q8TCU6 1659 aa20.16■□□□□ 0.82
PDCD2-205ENST00000537445 STRCQ7RTU9 1775 aa20.16■□□□□ 0.82
PDCD2-205ENST00000537445 ATP10AO60312 1499 aa20.14■□□□□ 0.81
PDCD2-205ENST00000537445 PLCH2O75038 1416 aa20.14■□□□□ 0.81
PDCD2-205ENST00000537445 DISP3Q9P2K9 1392 aa20.14■□□□□ 0.81
PDCD2-205ENST00000537445 CEBPAP49715 358 aaPredicted RBP20.14■□□□□ 0.81
PDCD2-205ENST00000537445 SOCS7O14512 581 aa20.12■□□□□ 0.81
PDCD2-205ENST00000537445 CDK13Q14004 1512 aaKnown RBP20.12■□□□□ 0.81
PDCD2-205ENST00000537445 NCOA2Q15596 1464 aa20.11■□□□□ 0.81
PDCD2-205ENST00000537445 C9orf84Q5VXU9 1444 aa20.1■□□□□ 0.81
PDCD2-205ENST00000537445 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
PDCD2-205ENST00000537445 MYOM3Q5VTT5 1437 aa20.09■□□□□ 0.81
PDCD2-205ENST00000537445 SETD1BQ9UPS6 1966 aaKnown RBP20.08■□□□□ 0.8
PDCD2-205ENST00000537445 CDK11AQ9UQ88 783 aaPredicted RBP20.07■□□□□ 0.8
PDCD2-205ENST00000537445 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
PDCD2-205ENST00000537445 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
PDCD2-205ENST00000537445 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
PDCD2-205ENST00000537445 EFCAB2Q5VUJ9 269 aa20.04■□□□□ 0.8
PDCD2-205ENST00000537445 UHRF1BP1Q6BDS2 1440 aa20.03■□□□□ 0.8
PDCD2-205ENST00000537445 MYO5CQ9NQX4 1742 aa20.02■□□□□ 0.8
PDCD2-205ENST00000537445 KDM5CP41229 1560 aa20■□□□□ 0.79
PDCD2-205ENST00000537445 AFAP1Q8N556 730 aa20■□□□□ 0.79
PDCD2-205ENST00000537445 PTPRTO14522 1441 aa20■□□□□ 0.79
PDCD2-205ENST00000537445 ZNF518AQ6AHZ1 1483 aa19.99■□□□□ 0.79
PDCD2-205ENST00000537445 MIA2Q96PC5 1412 aa19.99■□□□□ 0.79
PDCD2-205ENST00000537445 PTPN23Q9H3S7 1636 aa19.98■□□□□ 0.79
PDCD2-205ENST00000537445 ITGAEP38570 1179 aa19.98■□□□□ 0.79
PDCD2-205ENST00000537445 KIF14Q15058 1648 aa19.98■□□□□ 0.79
PDCD2-205ENST00000537445 SPATA31D1Q6ZQQ2 1576 aa19.97■□□□□ 0.79
PDCD2-205ENST00000537445 DIP2CQ9Y2E4 1556 aa19.97■□□□□ 0.79
PDCD2-205ENST00000537445 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
PDCD2-205ENST00000537445 LTBP4Q8N2S1 1624 aa19.97■□□□□ 0.79
PDCD2-205ENST00000537445 C3P01024 1663 aa19.97■□□□□ 0.79
PDCD2-205ENST00000537445 TCOF1Q13428 1488 aaKnown RBP19.96■□□□□ 0.79
PDCD2-205ENST00000537445 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
PDCD2-205ENST00000537445 TROQ12816 1431 aaPredicted RBP19.95■□□□□ 0.78
PDCD2-205ENST00000537445 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
PDCD2-205ENST00000537445 ARHGAP5Q13017 1502 aa19.92■□□□□ 0.78
PDCD2-205ENST00000537445 ABCA6Q8N139 1617 aa19.92■□□□□ 0.78
PDCD2-205ENST00000537445 ITSN2Q9NZM3 1697 aa19.92■□□□□ 0.78
PDCD2-205ENST00000537445 RAB3GAP2Q9H2M9 1393 aa19.91■□□□□ 0.78
PDCD2-205ENST00000537445 MLH3Q9UHC1 1453 aa19.91■□□□□ 0.78
PDCD2-205ENST00000537445 AGLP35573 1532 aa19.9■□□□□ 0.78
PDCD2-205ENST00000537445 CDC42BPBQ9Y5S2 1711 aa19.9■□□□□ 0.78
PDCD2-205ENST00000537445 IQSEC2Q5JU85 1478 aa19.89■□□□□ 0.77
PDCD2-205ENST00000537445 TRAPPC8Q9Y2L5 1435 aa19.89■□□□□ 0.77
PDCD2-205ENST00000537445 NCOA1Q15788 1441 aa19.88■□□□□ 0.77
PDCD2-205ENST00000537445 MYT1LQ9UL68 1186 aa19.88■□□□□ 0.77
PDCD2-205ENST00000537445 HFM1A2PYH4 1435 aa19.85■□□□□ 0.77
PDCD2-205ENST00000537445 KIDINS220Q9ULH0 1771 aa19.83■□□□□ 0.76
PDCD2-205ENST00000537445 ABCC1P33527 1531 aa19.82■□□□□ 0.76
PDCD2-205ENST00000537445 ACIN1Q9UKV3 1341 aaKnown RBP19.82■□□□□ 0.76
PDCD2-205ENST00000537445 ESF1Q9H501 851 aaKnown RBP19.82■□□□□ 0.76
PDCD2-205ENST00000537445 CAMSAP1Q5T5Y3 1602 aa19.8■□□□□ 0.76
PDCD2-205ENST00000537445 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
PDCD2-205ENST00000537445 CNTLNQ9NXG0 1405 aa19.8■□□□□ 0.76
PDCD2-205ENST00000537445 GCC2Q8IWJ2 1684 aa19.78■□□□□ 0.76
PDCD2-205ENST00000537445 NPATQ14207 1427 aa19.77■□□□□ 0.76
PDCD2-205ENST00000537445 DNMT1P26358 1616 aaKnown RBP19.77■□□□□ 0.76
PDCD2-205ENST00000537445 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
PDCD2-205ENST00000537445 NCKAP5LQ9HCH0 1330 aa19.76■□□□□ 0.75
PDCD2-205ENST00000537445 MROH2AA6NES4 1674 aa19.76■□□□□ 0.75
PDCD2-205ENST00000537445 ZNF335Q9H4Z2 1342 aaPredicted RBP19.76■□□□□ 0.75
PDCD2-205ENST00000537445 ZMYM3Q14202 1370 aa19.74■□□□□ 0.75
PDCD2-205ENST00000537445 PTPRKQ15262 1439 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms