RNA–Protein interactions for RNA: ENST00000537445.5

PDCD2-205, Transcript of programmed cell death 2, humanhuman

TSL 3 BASIC

Gene PDCD2, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-205ENST00000537445 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.49
PDCD2-205ENST00000537445 ABCC9O60706 1549 aa28.11■■■□□ 2.09
PDCD2-205ENST00000537445 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
PDCD2-205ENST00000537445 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
PDCD2-205ENST00000537445 RB1CC1Q8TDY2 1594 aa26.51■■□□□ 1.83
PDCD2-205ENST00000537445 NACADO15069 1562 aa26.22■■□□□ 1.79
PDCD2-205ENST00000537445 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
PDCD2-205ENST00000537445 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
PDCD2-205ENST00000537445 DCAF8L2P0C7V8 631 aa25.97■■□□□ 1.75
PDCD2-205ENST00000537445 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
PDCD2-205ENST00000537445 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
PDCD2-205ENST00000537445 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
PDCD2-205ENST00000537445 CECR2Q9BXF3 1484 aa25.36■■□□□ 1.65
PDCD2-205ENST00000537445 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
PDCD2-205ENST00000537445 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
PDCD2-205ENST00000537445 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
PDCD2-205ENST00000537445 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
PDCD2-205ENST00000537445 SCRIBQ14160 1630 aa25.13■■□□□ 1.61
PDCD2-205ENST00000537445 DNAJC5Q9H3Z4 198 aa24.99■■□□□ 1.59
PDCD2-205ENST00000537445 CUX2O14529 1486 aa24.4■■□□□ 1.5
PDCD2-205ENST00000537445 NCAPD3P42695 1498 aa24.25■■□□□ 1.47
PDCD2-205ENST00000537445 ERCC6Q03468 1493 aa24.25■■□□□ 1.47
PDCD2-205ENST00000537445 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
PDCD2-205ENST00000537445 NESP48681 1621 aa24.03■■□□□ 1.44
PDCD2-205ENST00000537445 HMGXB3Q12766 1538 aa24■■□□□ 1.43
PDCD2-205ENST00000537445 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
PDCD2-205ENST00000537445 SMARCA4P51532 1647 aa23.94■■□□□ 1.42
PDCD2-205ENST00000537445 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
PDCD2-205ENST00000537445 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
PDCD2-205ENST00000537445 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
PDCD2-205ENST00000537445 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
PDCD2-205ENST00000537445 BAZ1AQ9NRL2 1556 aaPredicted RBP23.73■■□□□ 1.39
PDCD2-205ENST00000537445 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
PDCD2-205ENST00000537445 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
PDCD2-205ENST00000537445 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
PDCD2-205ENST00000537445 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
PDCD2-205ENST00000537445 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
PDCD2-205ENST00000537445 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
PDCD2-205ENST00000537445 MRC2Q9UBG0 1479 aa23.45■■□□□ 1.34
PDCD2-205ENST00000537445 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
PDCD2-205ENST00000537445 WDR62O43379 1518 aa23.42■■□□□ 1.34
PDCD2-205ENST00000537445 WIZO95785 1651 aa23.25■■□□□ 1.31
PDCD2-205ENST00000537445 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
PDCD2-205ENST00000537445 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
PDCD2-205ENST00000537445 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
PDCD2-205ENST00000537445 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
PDCD2-205ENST00000537445 CFTRP13569 1480 aa23.11■■□□□ 1.29
PDCD2-205ENST00000537445 URB2Q14146 1524 aaKnown RBP23.07■■□□□ 1.28
PDCD2-205ENST00000537445 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
PDCD2-205ENST00000537445 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
PDCD2-205ENST00000537445 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
PDCD2-205ENST00000537445 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
PDCD2-205ENST00000537445 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.26
PDCD2-205ENST00000537445 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
PDCD2-205ENST00000537445 ARHGEF11O15085 1522 aa22.86■■□□□ 1.25
PDCD2-205ENST00000537445 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
PDCD2-205ENST00000537445 IFT140Q96RY7 1462 aa22.8■■□□□ 1.24
PDCD2-205ENST00000537445 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
PDCD2-205ENST00000537445 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
PDCD2-205ENST00000537445 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
PDCD2-205ENST00000537445 CCDC88BA6NC98 1476 aa22.67■■□□□ 1.22
PDCD2-205ENST00000537445 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
PDCD2-205ENST00000537445 CHD1O14646 1710 aa22.61■■□□□ 1.21
PDCD2-205ENST00000537445 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
PDCD2-205ENST00000537445 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.219e-7■■■■■ 36.8
PDCD2-205ENST00000537445 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
PDCD2-205ENST00000537445 TRHP20396 242 aaPredicted RBP22.57■■□□□ 1.2
PDCD2-205ENST00000537445 DNMBPQ6XZF7 1577 aa22.57■■□□□ 1.2
PDCD2-205ENST00000537445 FBLN2P98095 1184 aa22.48■■□□□ 1.19
PDCD2-205ENST00000537445 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
PDCD2-205ENST00000537445 RAD54L2Q9Y4B4 1467 aa22.4■■□□□ 1.18
PDCD2-205ENST00000537445 TDRD9Q8NDG6 1382 aaKnown RBP22.37■■□□□ 1.17
PDCD2-205ENST00000537445 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
PDCD2-205ENST00000537445 SOGA1O94964 1423 aa22.33■■□□□ 1.17
PDCD2-205ENST00000537445 SNAPC4Q5SXM2 1469 aa22.31■■□□□ 1.16
PDCD2-205ENST00000537445 WDR97A6NE52 1622 aa22.25■■□□□ 1.15
PDCD2-205ENST00000537445 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
PDCD2-205ENST00000537445 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
PDCD2-205ENST00000537445 FGD5Q6ZNL6 1462 aa22.23■■□□□ 1.15
PDCD2-205ENST00000537445 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
PDCD2-205ENST00000537445 GRIN2BQ13224 1484 aa22.18■■□□□ 1.14
PDCD2-205ENST00000537445 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
PDCD2-205ENST00000537445 CUX1P39880 1505 aa22.16■■□□□ 1.14
PDCD2-205ENST00000537445 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
PDCD2-205ENST00000537445 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
PDCD2-205ENST00000537445 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
PDCD2-205ENST00000537445 ABCA5Q8WWZ7 1642 aa21.97■■□□□ 1.11
PDCD2-205ENST00000537445 ABCA10Q8WWZ4 1543 aa21.96■■□□□ 1.11
PDCD2-205ENST00000537445 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
PDCD2-205ENST00000537445 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
PDCD2-205ENST00000537445 CEP170Q5SW79 1584 aa21.89■■□□□ 1.09
PDCD2-205ENST00000537445 NUP160Q12769 1436 aa21.88■■□□□ 1.09
PDCD2-205ENST00000537445 EEA1Q15075 1411 aa21.88■■□□□ 1.09
PDCD2-205ENST00000537445 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
PDCD2-205ENST00000537445 KIF13AQ9H1H9 1805 aa21.83■■□□□ 1.08
PDCD2-205ENST00000537445 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
PDCD2-205ENST00000537445 LOC105371045A0A1W2PR82 267 aa21.79■■□□□ 1.08
PDCD2-205ENST00000537445 FAM9AQ8IZU1 332 aaPredicted RBP21.79■■□□□ 1.08
PDCD2-205ENST00000537445 TOP2BQ02880 1626 aa21.75■■□□□ 1.07
PDCD2-205ENST00000537445 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms