RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 AKNAQ7Z591 1439 aa18.29■□□□□ 0.52
TRIM25-202ENST00000537230 JPH4Q96JJ6 628 aa18.28■□□□□ 0.52
TRIM25-202ENST00000537230 ABCC5O15440 1437 aa18.28■□□□□ 0.52
TRIM25-202ENST00000537230 NUP160Q12769 1436 aa18.26■□□□□ 0.51
TRIM25-202ENST00000537230 MPHOSPH9Q99550 1183 aa18.26■□□□□ 0.51
TRIM25-202ENST00000537230 DNMT1P26358 1616 aaKnown RBP18.25■□□□□ 0.51
TRIM25-202ENST00000537230 CDK11AQ9UQ88 783 aaPredicted RBP18.25■□□□□ 0.51
TRIM25-202ENST00000537230 KIF14Q15058 1648 aa18.25■□□□□ 0.51
TRIM25-202ENST00000537230 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
TRIM25-202ENST00000537230 CARMIL2Q6F5E8 1435 aa18.2■□□□□ 0.5
TRIM25-202ENST00000537230 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
TRIM25-202ENST00000537230 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
TRIM25-202ENST00000537230 ROCK1Q13464 1354 aa18.2■□□□□ 0.5
TRIM25-202ENST00000537230 GPATCH8Q9UKJ3 1502 aaKnown RBP18.19■□□□□ 0.5
TRIM25-202ENST00000537230 CAMSAP2Q08AD1 1489 aa18.19■□□□□ 0.5
TRIM25-202ENST00000537230 L3MBTL2Q969R5 705 aa18.16■□□□□ 0.5
TRIM25-202ENST00000537230 TSHZ2Q9NRE2 1034 aa18.15■□□□□ 0.5
TRIM25-202ENST00000537230 ADCY10Q96PN6 1610 aa18.14■□□□□ 0.49
TRIM25-202ENST00000537230 ANKRD30BQ9BXX2 1392 aa18.14■□□□□ 0.49
TRIM25-202ENST00000537230 ITSN2Q9NZM3 1697 aa18.13■□□□□ 0.49
TRIM25-202ENST00000537230 ABCA8O94911 1581 aa18.13■□□□□ 0.49
TRIM25-202ENST00000537230 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
TRIM25-202ENST00000537230 HSPA5P11021 654 aaKnown RBP18.12■□□□□ 0.49
TRIM25-202ENST00000537230 ATP10BO94823 1461 aa18.12■□□□□ 0.49
TRIM25-202ENST00000537230 NCOA1Q15788 1441 aa18.12■□□□□ 0.49
TRIM25-202ENST00000537230 ANP32CO43423 234 aa18.1■□□□□ 0.49
TRIM25-202ENST00000537230 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
TRIM25-202ENST00000537230 PLEKHD1A6NEE1 506 aa18.09■□□□□ 0.49
TRIM25-202ENST00000537230 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
TRIM25-202ENST00000537230 PZPP20742 1482 aa18.08■□□□□ 0.49
TRIM25-202ENST00000537230 RPRD2Q5VT52 1461 aaKnown RBP18.08■□□□□ 0.49
TRIM25-202ENST00000537230 NBPF8Q3BBV2 869 aa18.08■□□□□ 0.49
TRIM25-202ENST00000537230 BCANQ96GW7 911 aa18.08■□□□□ 0.48
TRIM25-202ENST00000537230 CROCC2H7BZ55 1655 aa18.07■□□□□ 0.48
TRIM25-202ENST00000537230 ADGBQ8N7X0 1667 aa18.07■□□□□ 0.48
TRIM25-202ENST00000537230 ABCC10Q5T3U5 1492 aa18.06■□□□□ 0.48
TRIM25-202ENST00000537230 TEX14Q8IWB6 1497 aa18.06■□□□□ 0.48
TRIM25-202ENST00000537230 CCER2I3L3R5 266 aa18.04■□□□□ 0.48
TRIM25-202ENST00000537230 C11orf95C9JLR9 678 aaPredicted RBP18.04■□□□□ 0.48
TRIM25-202ENST00000537230 ADGRL2O95490 1459 aa18.03■□□□□ 0.48
TRIM25-202ENST00000537230 EIF4G2P78344 907 aaKnown RBP eCLIP18.03■□□□□ 0.487e-9■■■■■ 43.2
TRIM25-202ENST00000537230 CHD1O14646 1710 aa18.03■□□□□ 0.48
TRIM25-202ENST00000537230 PTPRGP23470 1445 aa18.03■□□□□ 0.48
TRIM25-202ENST00000537230 ANKRD30AQ9BXX3 1397 aa18■□□□□ 0.47
TRIM25-202ENST00000537230 FKBP8Q14318 412 aa18■□□□□ 0.47
TRIM25-202ENST00000537230 ANKRD50Q9ULJ7 1429 aa17.99■□□□□ 0.47
TRIM25-202ENST00000537230 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.47
TRIM25-202ENST00000537230 PKD2Q13563 968 aa17.99■□□□□ 0.47
TRIM25-202ENST00000537230 C9orf84Q5VXU9 1444 aa17.98■□□□□ 0.47
TRIM25-202ENST00000537230 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
TRIM25-202ENST00000537230 KIAA1107Q9UPP5 1409 aa17.96■□□□□ 0.47
TRIM25-202ENST00000537230 CDC42BPBQ9Y5S2 1711 aa17.93■□□□□ 0.46
TRIM25-202ENST00000537230 NUP155O75694 1391 aa17.93■□□□□ 0.46
TRIM25-202ENST00000537230 CCDC7Q96M83 1385 aa17.92■□□□□ 0.46
TRIM25-202ENST00000537230 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
TRIM25-202ENST00000537230 MBD5Q9P267 1494 aa17.92■□□□□ 0.46
TRIM25-202ENST00000537230 SHANK2Q9UPX8 1470 aa17.92■□□□□ 0.46
TRIM25-202ENST00000537230 TSPY4P0CV99 314 aa17.92■□□□□ 0.46
TRIM25-202ENST00000537230 TSPY10P0CW01 314 aa17.92■□□□□ 0.46
TRIM25-202ENST00000537230 ZNF326Q5BKZ1 582 aaKnown RBP17.92■□□□□ 0.46
TRIM25-202ENST00000537230 ANP32EQ9BTT0 268 aa17.92■□□□□ 0.46
TRIM25-202ENST00000537230 SAMD9LQ8IVG5 1584 aa17.91■□□□□ 0.46
TRIM25-202ENST00000537230 BCL11AQ9H165 835 aa17.91■□□□□ 0.46
TRIM25-202ENST00000537230 CCDC184Q52MB2 194 aa17.9■□□□□ 0.46
TRIM25-202ENST00000537230 KIF15Q9NS87 1388 aa17.9■□□□□ 0.46
TRIM25-202ENST00000537230 CNTLNQ9NXG0 1405 aa17.9■□□□□ 0.46
TRIM25-202ENST00000537230 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
TRIM25-202ENST00000537230 PREX2Q70Z35 1606 aa17.88■□□□□ 0.45
TRIM25-202ENST00000537230 KIF7Q2M1P5 1343 aa17.88■□□□□ 0.45
TRIM25-202ENST00000537230 TTC37Q6PGP7 1564 aa17.88■□□□□ 0.45
TRIM25-202ENST00000537230 ARHGEF5Q12774 1597 aa17.86■□□□□ 0.45
TRIM25-202ENST00000537230 NEFLP07196 543 aa17.84■□□□□ 0.45
TRIM25-202ENST00000537230 CCDC141Q6ZP82 1450 aa17.84■□□□□ 0.45
TRIM25-202ENST00000537230 SYCP2Q9BX26 1530 aa17.84■□□□□ 0.45
TRIM25-202ENST00000537230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.45
TRIM25-202ENST00000537230 HNRNPUQ00839 825 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRIM25-202ENST00000537230 PRKRIP1Q9H875 184 aaPredicted RBP17.82■□□□□ 0.44
TRIM25-202ENST00000537230 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
TRIM25-202ENST00000537230 POLR1AO95602 1720 aaPredicted RBP17.81■□□□□ 0.44
TRIM25-202ENST00000537230 ARHGAP5Q13017 1502 aa17.81■□□□□ 0.44
TRIM25-202ENST00000537230 KDM5DQ9BY66 1539 aa17.81■□□□□ 0.44
TRIM25-202ENST00000537230 USP47Q96K76 1375 aa17.8■□□□□ 0.44
TRIM25-202ENST00000537230 ABCC2Q92887 1545 aa17.8■□□□□ 0.44
TRIM25-202ENST00000537230 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
TRIM25-202ENST00000537230 POLR3GLQ9BT43 218 aa17.78■□□□□ 0.44
TRIM25-202ENST00000537230 CNGB1Q14028 1251 aaPredicted RBP17.77■□□□□ 0.44
TRIM25-202ENST00000537230 RBM19Q9Y4C8 960 aaKnown RBP17.77■□□□□ 0.44
TRIM25-202ENST00000537230 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.43
TRIM25-202ENST00000537230 KDM5CP41229 1560 aa17.76■□□□□ 0.43
TRIM25-202ENST00000537230 ARHGEF12Q9NZN5 1544 aa17.75■□□□□ 0.43
TRIM25-202ENST00000537230 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
TRIM25-202ENST00000537230 DCAF11Q8TEB1 546 aa17.75■□□□□ 0.43
TRIM25-202ENST00000537230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.434e-8■■■□□ 14.6
TRIM25-202ENST00000537230 UHRF1BP1Q6BDS2 1440 aa17.74■□□□□ 0.43
TRIM25-202ENST00000537230 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
TRIM25-202ENST00000537230 RSPH4AQ5TD94 716 aa17.73■□□□□ 0.43
TRIM25-202ENST00000537230 MRS2Q9HD23 443 aa17.73■□□□□ 0.43
TRIM25-202ENST00000537230 RALGAPBQ86X10 1494 aa17.72■□□□□ 0.43
TRIM25-202ENST00000537230 ZCCHC11Q5TAX3 1644 aaKnown RBP17.72■□□□□ 0.43
TRIM25-202ENST00000537230 CARD11Q9BXL7 1154 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms