RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 PREX2Q70Z35 1606 aa27.59■■■□□ 2.01
SFSWAP-205ENST00000537164 SCAPERQ9BY12 1400 aa27.57■■■□□ 2
SFSWAP-205ENST00000537164 ARHGAP5Q13017 1502 aa27.57■■■□□ 2
SFSWAP-205ENST00000537164 CDC42BPAQ5VT25 1732 aa27.56■■■□□ 2
SFSWAP-205ENST00000537164 POGZQ7Z3K3 1410 aa27.55■■■□□ 2
SFSWAP-205ENST00000537164 ARHGEF40Q8TER5 1519 aa27.55■■■□□ 2
SFSWAP-205ENST00000537164 MAGI2Q86UL8 1455 aa27.53■■■□□ 2
SFSWAP-205ENST00000537164 VPS8Q8N3P4 1428 aa27.49■■□□□ 1.99
SFSWAP-205ENST00000537164 MTUS2Q5JR59 1369 aa27.48■■□□□ 1.99
SFSWAP-205ENST00000537164 EHBP1L1Q8N3D4 1523 aa27.47■■□□□ 1.99
SFSWAP-205ENST00000537164 GPATCH8Q9UKJ3 1502 aaKnown RBP27.46■■□□□ 1.99
SFSWAP-205ENST00000537164 ZNF518AQ6AHZ1 1483 aa27.46■■□□□ 1.99
SFSWAP-205ENST00000537164 KDM5CP41229 1560 aa27.46■■□□□ 1.99
SFSWAP-205ENST00000537164 ZFYVE16Q7Z3T8 1539 aa27.46■■□□□ 1.99
SFSWAP-205ENST00000537164 ABCC1P33527 1531 aa27.45■■□□□ 1.98
SFSWAP-205ENST00000537164 YEATS2Q9ULM3 1422 aa27.42■■□□□ 1.98
SFSWAP-205ENST00000537164 ADAMTSL3P82987 1691 aa27.42■■□□□ 1.98
SFSWAP-205ENST00000537164 ITSN2Q9NZM3 1697 aa27.42■■□□□ 1.98
SFSWAP-205ENST00000537164 TIAM1Q13009 1591 aa27.41■■□□□ 1.98
SFSWAP-205ENST00000537164 BCORL1Q5H9F3 1711 aa27.41■■□□□ 1.98
SFSWAP-205ENST00000537164 ARHGEF12Q9NZN5 1544 aa27.4■■□□□ 1.98
SFSWAP-205ENST00000537164 SAMD9LQ8IVG5 1584 aa27.38■■□□□ 1.97
SFSWAP-205ENST00000537164 MAP3K1Q13233 1512 aa27.36■■□□□ 1.97
SFSWAP-205ENST00000537164 CCNB3Q8WWL7 1395 aa27.36■■□□□ 1.97
SFSWAP-205ENST00000537164 SIGLEC1Q9BZZ2 1709 aa27.36■■□□□ 1.97
SFSWAP-205ENST00000537164 AFAP1Q8N556 730 aa27.36■■□□□ 1.97
SFSWAP-205ENST00000537164 HECW2Q9P2P5 1572 aa27.35■■□□□ 1.97
SFSWAP-205ENST00000537164 MLH3Q9UHC1 1453 aa27.35■■□□□ 1.97
SFSWAP-205ENST00000537164 TRAPPC8Q9Y2L5 1435 aa27.33■■□□□ 1.97
SFSWAP-205ENST00000537164 SUPT6HQ7KZ85 1726 aaKnown RBP27.33■■□□□ 1.97
SFSWAP-205ENST00000537164 ATP10AO60312 1499 aa27.33■■□□□ 1.97
SFSWAP-205ENST00000537164 KIAA1107Q9UPP5 1409 aa27.32■■□□□ 1.96
SFSWAP-205ENST00000537164 PLEKHH2Q8IVE3 1493 aa27.31■■□□□ 1.96
SFSWAP-205ENST00000537164 CFDP1Q9UEE9 299 aaPredicted RBP27.3■■□□□ 1.96
SFSWAP-205ENST00000537164 C9orf84Q5VXU9 1444 aa27.3■■□□□ 1.96
SFSWAP-205ENST00000537164 ARID4BQ4LE39 1312 aaPredicted RBP27.29■■□□□ 1.96
SFSWAP-205ENST00000537164 LRRC9Q6ZRR7 1453 aa27.29■■□□□ 1.96
SFSWAP-205ENST00000537164 SYCP2Q9BX26 1530 aa27.29■■□□□ 1.96
SFSWAP-205ENST00000537164 REREQ9P2R6 1566 aa27.28■■□□□ 1.96
SFSWAP-205ENST00000537164 DIP2CQ9Y2E4 1556 aa27.28■■□□□ 1.96
SFSWAP-205ENST00000537164 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
SFSWAP-205ENST00000537164 KIDINS220Q9ULH0 1771 aa27.27■■□□□ 1.96
SFSWAP-205ENST00000537164 MADDQ8WXG6 1647 aa27.27■■□□□ 1.96
SFSWAP-205ENST00000537164 ABCA6Q8N139 1617 aa27.26■■□□□ 1.95
SFSWAP-205ENST00000537164 ZNF777Q9ULD5 760 aaPredicted RBP27.25■■□□□ 1.95
SFSWAP-205ENST00000537164 PTPRMP28827 1452 aa27.24■■□□□ 1.95
SFSWAP-205ENST00000537164 HNRNPMP52272 730 aaKnown RBP eCLIP27.2■■□□□ 1.94
SFSWAP-205ENST00000537164 MBD5Q9P267 1494 aa27.18■■□□□ 1.94
SFSWAP-205ENST00000537164 INO80Q9ULG1 1556 aaPredicted RBP27.17■■□□□ 1.94
SFSWAP-205ENST00000537164 RIMS1Q86UR5 1692 aaKnown RBP27.17■■□□□ 1.94
SFSWAP-205ENST00000537164 AGLP35573 1532 aa27.16■■□□□ 1.94
SFSWAP-205ENST00000537164 KANK4Q5T7N3 995 aaPredicted RBP27.16■■□□□ 1.94
SFSWAP-205ENST00000537164 ZNF644Q9H582 1327 aaPredicted RBP27.16■■□□□ 1.94
SFSWAP-205ENST00000537164 FER1L4A9Z1Z3 1794 aa27.14■■□□□ 1.94
SFSWAP-205ENST00000537164 MYT1LQ9UL68 1186 aa27.14■■□□□ 1.94
SFSWAP-205ENST00000537164 ATP7AQ04656 1500 aa27.14■■□□□ 1.94
SFSWAP-205ENST00000537164 SPAG9O60271 1321 aaKnown RBP27.14■■□□□ 1.93
SFSWAP-205ENST00000537164 CAMSAP2Q08AD1 1489 aa27.11■■□□□ 1.93
SFSWAP-205ENST00000537164 MLECQ14165 292 aa27.07■■□□□ 1.92
SFSWAP-205ENST00000537164 RTEL1-TNFRSF6BF6WH68 1400 aa27.07■■□□□ 1.92
SFSWAP-205ENST00000537164 PLXNC1O60486 1568 aa27.06■■□□□ 1.92
SFSWAP-205ENST00000537164 ARHGEF5Q12774 1597 aa27.06■■□□□ 1.92
SFSWAP-205ENST00000537164 RSPH4AQ5TD94 716 aa27.06■■□□□ 1.92
SFSWAP-205ENST00000537164 APLP2Q06481 763 aa27.05■■□□□ 1.92
SFSWAP-205ENST00000537164 MYOM3Q5VTT5 1437 aa27.05■■□□□ 1.92
SFSWAP-205ENST00000537164 MIA2Q96PC5 1412 aa27.05■■□□□ 1.92
SFSWAP-205ENST00000537164 CCDC141Q6ZP82 1450 aa27.05■■□□□ 1.92
SFSWAP-205ENST00000537164 ADGBQ8N7X0 1667 aa27.05■■□□□ 1.92
SFSWAP-205ENST00000537164 A2MP01023 1474 aa27■■□□□ 1.91
SFSWAP-205ENST00000537164 LMTK3Q96Q04 1460 aa26.93■■□□□ 1.9
SFSWAP-205ENST00000537164 MAST1Q9Y2H9 1570 aa26.92■■□□□ 1.9
SFSWAP-205ENST00000537164 CNTLNQ9NXG0 1405 aa26.9■■□□□ 1.9
SFSWAP-205ENST00000537164 C3P01024 1663 aa26.9■■□□□ 1.9
SFSWAP-205ENST00000537164 DHX29Q7Z478 1369 aaKnown RBP26.9■■□□□ 1.9
SFSWAP-205ENST00000537164 MROH2AA6NES4 1674 aa26.89■■□□□ 1.9
SFSWAP-205ENST00000537164 PTPN23Q9H3S7 1636 aa26.88■■□□□ 1.89
SFSWAP-205ENST00000537164 TSPY4P0CV99 314 aa26.88■■□□□ 1.89
SFSWAP-205ENST00000537164 TSPY10P0CW01 314 aa26.88■■□□□ 1.89
SFSWAP-205ENST00000537164 SETD1BQ9UPS6 1966 aaKnown RBP26.88■■□□□ 1.89
SFSWAP-205ENST00000537164 FGD6Q6ZV73 1430 aa26.86■■□□□ 1.89
SFSWAP-205ENST00000537164 TCOF1Q13428 1488 aaKnown RBP26.85■■□□□ 1.89
SFSWAP-205ENST00000537164 PREX1Q8TCU6 1659 aa26.85■■□□□ 1.89
SFSWAP-205ENST00000537164 CEBPAP49715 358 aaPredicted RBP26.84■■□□□ 1.89
SFSWAP-205ENST00000537164 ESF1Q9H501 851 aaKnown RBP26.84■■□□□ 1.89
SFSWAP-205ENST00000537164 PPP6R1Q9UPN7 881 aa26.84■■□□□ 1.89
SFSWAP-205ENST00000537164 CROCC2H7BZ55 1655 aa26.82■■□□□ 1.88
SFSWAP-205ENST00000537164 PLPPR3Q6T4P5 718 aa26.81■■□□□ 1.88
SFSWAP-205ENST00000537164 CLTCQ00610 1675 aaKnown RBP26.8■■□□□ 1.88
SFSWAP-205ENST00000537164 SHANK2Q9UPX8 1470 aa26.8■■□□□ 1.88
SFSWAP-205ENST00000537164 DNMT1P26358 1616 aaKnown RBP26.79■■□□□ 1.88
SFSWAP-205ENST00000537164 FAM135AQ9P2D6 1515 aa26.78■■□□□ 1.88
SFSWAP-205ENST00000537164 ABCC5O15440 1437 aa26.77■■□□□ 1.88
SFSWAP-205ENST00000537164 ZMYM3Q14202 1370 aa26.76■■□□□ 1.87
SFSWAP-205ENST00000537164 GGT6Q6P531 493 aa26.76■■□□□ 1.87
SFSWAP-205ENST00000537164 NPATQ14207 1427 aa26.74■■□□□ 1.87
SFSWAP-205ENST00000537164 EIF2AK4Q9P2K8 1649 aaKnown RBP26.74■■□□□ 1.87
SFSWAP-205ENST00000537164 DAPK1P53355 1430 aa26.73■■□□□ 1.87
SFSWAP-205ENST00000537164 KIF3BO15066 747 aa26.72■■□□□ 1.87
SFSWAP-205ENST00000537164 UHRF1BP1Q6BDS2 1440 aa26.72■■□□□ 1.87
SFSWAP-205ENST00000537164 RNF17Q9BXT8 1623 aaKnown RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms