RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 ZRSR1Q15695 479 aaKnown RBP15.65■□□□□ 0.1
AMBRA1-212ENST00000534300 POGKQ9P215 609 aa15.65■□□□□ 0.1
AMBRA1-212ENST00000534300 UNC13AQ9UPW8 1703 aa15.64■□□□□ 0.09
AMBRA1-212ENST00000534300 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
AMBRA1-212ENST00000534300 B4GALNT3Q6L9W6 998 aa15.63■□□□□ 0.09
AMBRA1-212ENST00000534300 IGF1RP08069 1367 aa15.63■□□□□ 0.09
AMBRA1-212ENST00000534300 FHOD3Q2V2M9 1422 aa15.61■□□□□ 0.09
AMBRA1-212ENST00000534300 ARHGAP35Q9NRY4 1499 aa15.61■□□□□ 0.09
AMBRA1-212ENST00000534300 KIF3BO15066 747 aa15.61■□□□□ 0.09
AMBRA1-212ENST00000534300 MSNP26038 577 aaKnown RBP15.61■□□□□ 0.09
AMBRA1-212ENST00000534300 CDCA8Q53HL2 280 aa15.61■□□□□ 0.09
AMBRA1-212ENST00000534300 A0A0G2JS52 829 aa15.61■□□□□ 0.09
AMBRA1-212ENST00000534300 RGS3P49796 1198 aa15.6■□□□□ 0.09
AMBRA1-212ENST00000534300 CASC1Q6TDU7 716 aa15.6■□□□□ 0.09
AMBRA1-212ENST00000534300 PRG4Q92954 1404 aaPredicted RBP15.6■□□□□ 0.09
AMBRA1-212ENST00000534300 ANKRD30AQ9BXX3 1397 aa15.6■□□□□ 0.09
AMBRA1-212ENST00000534300 CHAF1AQ13111 956 aaPredicted RBP15.6■□□□□ 0.09
AMBRA1-212ENST00000534300 WASHC2CQ9Y4E1 1318 aa15.59■□□□□ 0.09
AMBRA1-212ENST00000534300 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
AMBRA1-212ENST00000534300 ZBTB7CA1YPR0 619 aa15.58■□□□□ 0.09
AMBRA1-212ENST00000534300 PNNQ9H307 717 aaKnown RBP15.58■□□□□ 0.08
AMBRA1-212ENST00000534300 LMOD2Q6P5Q4 547 aa15.57■□□□□ 0.08
AMBRA1-212ENST00000534300 VPS8Q8N3P4 1428 aa15.57■□□□□ 0.08
AMBRA1-212ENST00000534300 NRDCO43847 1150 aa15.56■□□□□ 0.08
AMBRA1-212ENST00000534300 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
AMBRA1-212ENST00000534300 SNAPC4Q5SXM2 1469 aa15.56■□□□□ 0.08
AMBRA1-212ENST00000534300 TSHZ2Q9NRE2 1034 aa15.55■□□□□ 0.08
AMBRA1-212ENST00000534300 CCER2I3L3R5 266 aa15.55■□□□□ 0.08
AMBRA1-212ENST00000534300 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
AMBRA1-212ENST00000534300 PLCB2Q00722 1185 aa15.55■□□□□ 0.08
AMBRA1-212ENST00000534300 HSP90AB1P08238 724 aaKnown RBP15.54■□□□□ 0.08
AMBRA1-212ENST00000534300 FTSJ3Q8IY81 847 aaKnown RBP15.53■□□□□ 0.08
AMBRA1-212ENST00000534300 GOLGA6L6A8MZA4 724 aa15.53■□□□□ 0.08
AMBRA1-212ENST00000534300 HNRNPMP52272 730 aaKnown RBP eCLIP15.53■□□□□ 0.086e-8■■■■□ 24.7
AMBRA1-212ENST00000534300 HSCBQ8IWL3 235 aa15.5■□□□□ 0.07
AMBRA1-212ENST00000534300 CFAP53Q96M91 514 aa15.5■□□□□ 0.07
AMBRA1-212ENST00000534300 CHMP4BQ9H444 224 aaKnown RBP15.5■□□□□ 0.07
AMBRA1-212ENST00000534300 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.5■□□□□ 0.07
AMBRA1-212ENST00000534300 MS4A1P11836 297 aa15.49■□□□□ 0.07
AMBRA1-212ENST00000534300 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
AMBRA1-212ENST00000534300 KNSTRNQ9Y448 316 aa15.47■□□□□ 0.07
AMBRA1-212ENST00000534300 PTMSP20962 102 aa15.46■□□□□ 0.06
AMBRA1-212ENST00000534300 MAGI1Q96QZ7 1491 aaPredicted RBP15.45■□□□□ 0.06
AMBRA1-212ENST00000534300 SENP3-EIF4A1A0A087X0R7 540 aa15.45■□□□□ 0.06
AMBRA1-212ENST00000534300 TIMELESSQ9UNS1 1208 aa15.45■□□□□ 0.06
AMBRA1-212ENST00000534300 TCERG1O14776 1098 aaKnown RBP15.44■□□□□ 0.06
AMBRA1-212ENST00000534300 TPRNQ4KMQ1 711 aa15.43■□□□□ 0.06
AMBRA1-212ENST00000534300 IPO9Q96P70 1041 aaKnown RBP15.43■□□□□ 0.06
AMBRA1-212ENST00000534300 NUP155O75694 1391 aa15.43■□□□□ 0.06
AMBRA1-212ENST00000534300 PEG3Q9GZU2 1588 aa15.43■□□□□ 0.06
AMBRA1-212ENST00000534300 CARD11Q9BXL7 1154 aa15.41■□□□□ 0.06
AMBRA1-212ENST00000534300 RSPH6AQ9H0K4 717 aa15.41■□□□□ 0.06
AMBRA1-212ENST00000534300 KIAA2012Q0VF49 1180 aa15.41■□□□□ 0.06
AMBRA1-212ENST00000534300 FRAT1Q92837 279 aaPredicted RBP15.41■□□□□ 0.06
AMBRA1-212ENST00000534300 GBP4Q96PP9 640 aa15.41■□□□□ 0.06
AMBRA1-212ENST00000534300 USP35Q9P2H5 1018 aa15.41■□□□□ 0.06
AMBRA1-212ENST00000534300 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
AMBRA1-212ENST00000534300 CFAP44Q96MT7 982 aa15.39■□□□□ 0.05
AMBRA1-212ENST00000534300 GOLGA6L4A6NEF3 574 aa15.39■□□□□ 0.05
AMBRA1-212ENST00000534300 PKD2Q13563 968 aa15.39■□□□□ 0.05
AMBRA1-212ENST00000534300 AMER1Q5JTC6 1135 aaPredicted RBP15.39■□□□□ 0.05
AMBRA1-212ENST00000534300 POGZQ7Z3K3 1410 aa15.39■□□□□ 0.05
AMBRA1-212ENST00000534300 HSP90AA2PQ14568 343 aaPredicted RBP15.38■□□□□ 0.05
AMBRA1-212ENST00000534300 KIAA0586Q9BVV6 1533 aa15.38■□□□□ 0.05
AMBRA1-212ENST00000534300 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
AMBRA1-212ENST00000534300 GOLGA6L3A6NEY3 463 aa15.37■□□□□ 0.05
AMBRA1-212ENST00000534300 CUX1P39880 1505 aa15.37■□□□□ 0.05
AMBRA1-212ENST00000534300 TNNT3P45378 269 aaPredicted RBP15.36■□□□□ 0.05
AMBRA1-212ENST00000534300 SIN3AQ96ST3 1273 aa15.36■□□□□ 0.05
AMBRA1-212ENST00000534300 DCAF11Q8TEB1 546 aa15.36■□□□□ 0.05
AMBRA1-212ENST00000534300 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
AMBRA1-212ENST00000534300 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
AMBRA1-212ENST00000534300 NUDCQ9Y266 331 aa15.34■□□□□ 0.05
AMBRA1-212ENST00000534300 TOP2BQ02880 1626 aa15.34■□□□□ 0.05
AMBRA1-212ENST00000534300 MAPK8IP3Q9UPT6 1336 aa15.34■□□□□ 0.05
AMBRA1-212ENST00000534300 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
AMBRA1-212ENST00000534300 DRC7Q8IY82 874 aa15.33■□□□□ 0.04
AMBRA1-212ENST00000534300 STK26Q9P289 416 aa15.32■□□□□ 0.04
AMBRA1-212ENST00000534300 PRDM2Q13029 1718 aa15.32■□□□□ 0.04
AMBRA1-212ENST00000534300 UACAQ9BZF9 1416 aa15.32■□□□□ 0.04
AMBRA1-212ENST00000534300 RUSC2Q8N2Y8 1516 aa15.32■□□□□ 0.04
AMBRA1-212ENST00000534300 GZF1Q9H116 711 aaPredicted RBP15.32■□□□□ 0.04
AMBRA1-212ENST00000534300 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.31■□□□□ 0.04
AMBRA1-212ENST00000534300 SPRYD3Q8NCJ5 442 aa15.31■□□□□ 0.04
AMBRA1-212ENST00000534300 URB2Q14146 1524 aaKnown RBP15.3■□□□□ 0.04
AMBRA1-212ENST00000534300 VSIG10Q8N0Z9 540 aa15.3■□□□□ 0.04
AMBRA1-212ENST00000534300 SLKQ9H2G2 1235 aaPredicted RBP15.3■□□□□ 0.04
AMBRA1-212ENST00000534300 MCCP23508 829 aa15.3■□□□□ 0.04
AMBRA1-212ENST00000534300 FGD1P98174 961 aa15.29■□□□□ 0.04
AMBRA1-212ENST00000534300 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
AMBRA1-212ENST00000534300 SETD5Q9C0A6 1442 aa15.28■□□□□ 0.04
AMBRA1-212ENST00000534300 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
AMBRA1-212ENST00000534300 TMF1P82094 1093 aa15.27■□□□□ 0.04
AMBRA1-212ENST00000534300 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.04
AMBRA1-212ENST00000534300 SYAP1Q96A49 352 aaPredicted RBP15.27■□□□□ 0.04
AMBRA1-212ENST00000534300 KCNJ4P48050 445 aa15.27■□□□□ 0.03
AMBRA1-212ENST00000534300 ARID3AQ99856 593 aa15.27■□□□□ 0.03
AMBRA1-212ENST00000534300 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
AMBRA1-212ENST00000534300 MYOM3Q5VTT5 1437 aa15.26■□□□□ 0.03
AMBRA1-212ENST00000534300 PLEKHH2Q8IVE3 1493 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms