RNA–Protein interactions for RNA: ENST00000534207.5

CHID1-223, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,171 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-223ENST00000534207 NEO1Q92859 1461 aa27.97■■■□□ 2.07
CHID1-223ENST00000534207 PHLDB1Q86UU1 1377 aa27.96■■■□□ 2.07
CHID1-223ENST00000534207 ARHGAP5Q13017 1502 aa27.92■■■□□ 2.06
CHID1-223ENST00000534207 FANCAO15360 1455 aa27.92■■■□□ 2.06
CHID1-223ENST00000534207 MYOM3Q5VTT5 1437 aa27.92■■■□□ 2.06
CHID1-223ENST00000534207 MIA2Q96PC5 1412 aa27.9■■■□□ 2.06
CHID1-223ENST00000534207 EFCAB2Q5VUJ9 269 aa27.86■■■□□ 2.05
CHID1-223ENST00000534207 SAMD9LQ8IVG5 1584 aa27.84■■■□□ 2.05
CHID1-223ENST00000534207 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.05
CHID1-223ENST00000534207 AKNAQ7Z591 1439 aa27.83■■■□□ 2.05
CHID1-223ENST00000534207 ABCC1P33527 1531 aa27.82■■■□□ 2.04
CHID1-223ENST00000534207 CFDP1Q9UEE9 299 aaPredicted RBP27.81■■■□□ 2.04
CHID1-223ENST00000534207 FGD6Q6ZV73 1430 aa27.79■■■□□ 2.04
CHID1-223ENST00000534207 PTPN23Q9H3S7 1636 aa27.78■■■□□ 2.04
CHID1-223ENST00000534207 ADGRL1O94910 1474 aa27.78■■■□□ 2.04
CHID1-223ENST00000534207 KIAA1107Q9UPP5 1409 aa27.78■■■□□ 2.04
CHID1-223ENST00000534207 TCOF1Q13428 1488 aaKnown RBP27.76■■■□□ 2.04
CHID1-223ENST00000534207 KDM6BO15054 1643 aa27.76■■■□□ 2.03
CHID1-223ENST00000534207 CAMSAP2Q08AD1 1489 aa27.76■■■□□ 2.03
CHID1-223ENST00000534207 RICTORQ6R327 1708 aa27.75■■■□□ 2.03
CHID1-223ENST00000534207 ARHGEF5Q12774 1597 aa27.72■■■□□ 2.03
CHID1-223ENST00000534207 DENND4BO75064 1496 aaPredicted RBP27.7■■■□□ 2.03
CHID1-223ENST00000534207 SYCP2Q9BX26 1530 aa27.7■■■□□ 2.02
CHID1-223ENST00000534207 SCAPERQ9BY12 1400 aa27.69■■■□□ 2.02
CHID1-223ENST00000534207 PPARGC1BQ86YN6 1023 aaKnown RBP27.69■■■□□ 2.02
CHID1-223ENST00000534207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.69■■■□□ 2.02
CHID1-223ENST00000534207 RRBP1Q9P2E9 1410 aaKnown RBP27.68■■■□□ 2.02
CHID1-223ENST00000534207 FRMPD1Q5SYB0 1578 aa27.68■■■□□ 2.02
CHID1-223ENST00000534207 POGZQ7Z3K3 1410 aa27.67■■■□□ 2.02
CHID1-223ENST00000534207 ARHGEF12Q9NZN5 1544 aa27.67■■■□□ 2.02
CHID1-223ENST00000534207 ZNF518AQ6AHZ1 1483 aa27.67■■■□□ 2.02
CHID1-223ENST00000534207 KDM5CP41229 1560 aa27.67■■■□□ 2.02
CHID1-223ENST00000534207 ZMYM4Q5VZL5 1548 aa27.67■■■□□ 2.02
CHID1-223ENST00000534207 MBD5Q9P267 1494 aa27.66■■■□□ 2.02
CHID1-223ENST00000534207 COL17A1Q9UMD9 1497 aaPredicted RBP27.65■■■□□ 2.02
CHID1-223ENST00000534207 ZNF777Q9ULD5 760 aaPredicted RBP27.65■■■□□ 2.02
CHID1-223ENST00000534207 RSPH4AQ5TD94 716 aa27.64■■■□□ 2.02
CHID1-223ENST00000534207 DNMT1P26358 1616 aaKnown RBP27.63■■■□□ 2.01
CHID1-223ENST00000534207 CROCC2H7BZ55 1655 aa27.63■■■□□ 2.01
CHID1-223ENST00000534207 CCDC141Q6ZP82 1450 aa27.61■■■□□ 2.01
CHID1-223ENST00000534207 ZNF644Q9H582 1327 aaPredicted RBP27.61■■■□□ 2.01
CHID1-223ENST00000534207 TRAPPC8Q9Y2L5 1435 aa27.58■■■□□ 2.01
CHID1-223ENST00000534207 MAGI2Q86UL8 1455 aa27.58■■■□□ 2.01
CHID1-223ENST00000534207 HECW2Q9P2P5 1572 aa27.58■■■□□ 2.01
CHID1-223ENST00000534207 MAST1Q9Y2H9 1570 aa27.58■■■□□ 2.01
CHID1-223ENST00000534207 SHANK2Q9UPX8 1470 aa27.56■■■□□ 2
CHID1-223ENST00000534207 INO80Q9ULG1 1556 aaPredicted RBP27.56■■■□□ 2
CHID1-223ENST00000534207 MLH3Q9UHC1 1453 aa27.55■■■□□ 2
CHID1-223ENST00000534207 HNRNPMP52272 730 aaKnown RBP eCLIP27.53■■■□□ 2
CHID1-223ENST00000534207 KIDINS220Q9ULH0 1771 aa27.52■■■□□ 2
CHID1-223ENST00000534207 RTEL1-TNFRSF6BF6WH68 1400 aa27.51■■□□□ 1.99
CHID1-223ENST00000534207 DAPK1P53355 1430 aa27.51■■□□□ 1.99
CHID1-223ENST00000534207 RAPGEF3O95398 923 aa27.51■■□□□ 1.99
CHID1-223ENST00000534207 ATP7AQ04656 1500 aa27.5■■□□□ 1.99
CHID1-223ENST00000534207 ZFYVE16Q7Z3T8 1539 aa27.5■■□□□ 1.99
CHID1-223ENST00000534207 ADGBQ8N7X0 1667 aa27.49■■□□□ 1.99
CHID1-223ENST00000534207 ARHGEF40Q8TER5 1519 aa27.49■■□□□ 1.99
CHID1-223ENST00000534207 ABCC5O15440 1437 aa27.49■■□□□ 1.99
CHID1-223ENST00000534207 FAM50AQ14320 339 aaKnown RBP27.47■■□□□ 1.99
CHID1-223ENST00000534207 AFAP1Q8N556 730 aa27.47■■□□□ 1.99
CHID1-223ENST00000534207 PLXNC1O60486 1568 aa27.47■■□□□ 1.99
CHID1-223ENST00000534207 SPAG9O60271 1321 aaKnown RBP27.43■■□□□ 1.98
CHID1-223ENST00000534207 C9orf84Q5VXU9 1444 aa27.43■■□□□ 1.98
CHID1-223ENST00000534207 ABCA6Q8N139 1617 aa27.43■■□□□ 1.98
CHID1-223ENST00000534207 TSPY4P0CV99 314 aa27.43■■□□□ 1.98
CHID1-223ENST00000534207 TSPY10P0CW01 314 aa27.43■■□□□ 1.98
CHID1-223ENST00000534207 REREQ9P2R6 1566 aa27.43■■□□□ 1.98
CHID1-223ENST00000534207 DIP2CQ9Y2E4 1556 aa27.43■■□□□ 1.98
CHID1-223ENST00000534207 ADGRL2O95490 1459 aa27.42■■□□□ 1.98
CHID1-223ENST00000534207 ROCK1Q13464 1354 aa27.35■■□□□ 1.97
CHID1-223ENST00000534207 YEATS2Q9ULM3 1422 aa27.35■■□□□ 1.97
CHID1-223ENST00000534207 ATP10AO60312 1499 aa27.35■■□□□ 1.97
CHID1-223ENST00000534207 PTPRKQ15262 1439 aa27.33■■□□□ 1.97
CHID1-223ENST00000534207 ANKRD30AQ9BXX3 1397 aa27.32■■□□□ 1.96
CHID1-223ENST00000534207 BCORL1Q5H9F3 1711 aa27.31■■□□□ 1.96
CHID1-223ENST00000534207 NCOA1Q15788 1441 aa27.31■■□□□ 1.96
CHID1-223ENST00000534207 DUOX2Q9NRD8 1548 aa27.3■■□□□ 1.96
CHID1-223ENST00000534207 AGLP35573 1532 aa27.29■■□□□ 1.96
CHID1-223ENST00000534207 EIF2AK4Q9P2K8 1649 aaKnown RBP27.29■■□□□ 1.96
CHID1-223ENST00000534207 GCC2Q8IWJ2 1684 aa27.27■■□□□ 1.96
CHID1-223ENST00000534207 A2MP01023 1474 aa27.27■■□□□ 1.96
CHID1-223ENST00000534207 MYT1LQ9UL68 1186 aa27.27■■□□□ 1.96
CHID1-223ENST00000534207 DHX29Q7Z478 1369 aaKnown RBP27.23■■□□□ 1.95
CHID1-223ENST00000534207 KIF15Q9NS87 1388 aa27.23■■□□□ 1.95
CHID1-223ENST00000534207 SIGLEC1Q9BZZ2 1709 aa27.23■■□□□ 1.95
CHID1-223ENST00000534207 ERBINQ96RT1 1412 aa27.23■■□□□ 1.95
CHID1-223ENST00000534207 CHIC2Q9UKJ5 165 aa27.19■■□□□ 1.94
CHID1-223ENST00000534207 HFM1A2PYH4 1435 aa27.18■■□□□ 1.94
CHID1-223ENST00000534207 ITGAEP38570 1179 aa27.18■■□□□ 1.94
CHID1-223ENST00000534207 RNF17Q9BXT8 1623 aaKnown RBP27.17■■□□□ 1.94
CHID1-223ENST00000534207 TRIM26Q12899 539 aaPredicted RBP27.17■■□□□ 1.94
CHID1-223ENST00000534207 DEPDC5O75140 1603 aa27.14■■□□□ 1.94
CHID1-223ENST00000534207 RRP7BPQ9NSQ0 103 aa27.13■■□□□ 1.93
CHID1-223ENST00000534207 NAIPQ13075 1403 aa27.13■■□□□ 1.93
CHID1-223ENST00000534207 ANKRD50Q9ULJ7 1429 aa27.13■■□□□ 1.93
CHID1-223ENST00000534207 FAM135AQ9P2D6 1515 aa27.12■■□□□ 1.93
CHID1-223ENST00000534207 UNC13BO14795 1591 aa27.08■■□□□ 1.93
CHID1-223ENST00000534207 PRDM15P57071 1507 aaPredicted RBP27.06■■□□□ 1.92
CHID1-223ENST00000534207 ADAMTSL3P82987 1691 aa27.06■■□□□ 1.92
CHID1-223ENST00000534207 MROH1Q8NDA8 1641 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms