RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
SOX6-216ENST00000533658 EFCAB3Q8N7B9 438 aa12.64□□□□□ -0.39
SOX6-216ENST00000533658 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
SOX6-216ENST00000533658 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
SOX6-216ENST00000533658 ARSIQ5FYB1 569 aa12.58□□□□□ -0.4
SOX6-216ENST00000533658 HCSTQ9UBK5 93 aa12.57□□□□□ -0.4
SOX6-216ENST00000533658 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
SOX6-216ENST00000533658 SPOCK2Q92563 424 aa12.56□□□□□ -0.4
SOX6-216ENST00000533658 UNC13AQ9UPW8 1703 aa12.52□□□□□ -0.41
SOX6-216ENST00000533658 KHSRPQ92945 711 aaKnown RBP eCLIP12.51□□□□□ -0.41
SOX6-216ENST00000533658 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
SOX6-216ENST00000533658 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
SOX6-216ENST00000533658 MYO15BQ96JP2 1530 aa12.47□□□□□ -0.41
SOX6-216ENST00000533658 SOX12O15370 315 aa12.46□□□□□ -0.41
SOX6-216ENST00000533658 PBX2P40425 430 aa12.46□□□□□ -0.41
SOX6-216ENST00000533658 IFNLR1Q8IU57 520 aaPredicted RBP12.46□□□□□ -0.41
SOX6-216ENST00000533658 RGS20O76081 388 aa12.41□□□□□ -0.42
SOX6-216ENST00000533658 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
SOX6-216ENST00000533658 IRX2Q9BZI1 471 aaPredicted RBP12.4□□□□□ -0.42
SOX6-216ENST00000533658 PHF8Q9UPP1 1060 aa12.4□□□□□ -0.42
SOX6-216ENST00000533658 POTEEQ6S8J3 1075 aa12.39□□□□□ -0.43
SOX6-216ENST00000533658 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
SOX6-216ENST00000533658 NUDT7P0C024 238 aa12.36□□□□□ -0.43
SOX6-216ENST00000533658 SHROOM4Q9ULL8 1493 aa12.33□□□□□ -0.44
SOX6-216ENST00000533658 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
SOX6-216ENST00000533658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
SOX6-216ENST00000533658 ZFP91Q96JP5 570 aaPredicted RBP12.31□□□□□ -0.44
SOX6-216ENST00000533658 CECR2Q9BXF3 1484 aa12.3□□□□□ -0.44
SOX6-216ENST00000533658 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
SOX6-216ENST00000533658 RIOK3O14730 519 aaKnown RBP12.29□□□□□ -0.44
SOX6-216ENST00000533658 CC2D2AQ9P2K1 1620 aa12.29□□□□□ -0.44
SOX6-216ENST00000533658 KIF3CO14782 793 aa12.27□□□□□ -0.45
SOX6-216ENST00000533658 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
SOX6-216ENST00000533658 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
SOX6-216ENST00000533658 ZCCHC6Q5VYS8 1495 aaKnown RBP12.26□□□□□ -0.45
SOX6-216ENST00000533658 NLRP6P59044 892 aa12.25□□□□□ -0.45
SOX6-216ENST00000533658 PCDHGA4Q9Y5G9 962 aa12.25□□□□□ -0.45
SOX6-216ENST00000533658 C2orf72A6NCS6 295 aa12.24□□□□□ -0.45
SOX6-216ENST00000533658 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
SOX6-216ENST00000533658 SLC34A2O95436 690 aa12.23□□□□□ -0.45
SOX6-216ENST00000533658 FBXO22Q8NEZ5 403 aa12.23□□□□□ -0.45
SOX6-216ENST00000533658 DCAF1Q9Y4B6 1507 aa12.22□□□□□ -0.45
SOX6-216ENST00000533658 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
SOX6-216ENST00000533658 SCRIBQ14160 1630 aa12.2□□□□□ -0.46
SOX6-216ENST00000533658 TK2O00142 265 aa12.19□□□□□ -0.46
SOX6-216ENST00000533658 KCTD12Q96CX2 325 aaKnown RBP12.19□□□□□ -0.46
SOX6-216ENST00000533658 HRO43593 1189 aa12.18□□□□□ -0.46
SOX6-216ENST00000533658 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
SOX6-216ENST00000533658 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
SOX6-216ENST00000533658 DMRTA1Q5VZB9 504 aa12.14□□□□□ -0.47
SOX6-216ENST00000533658 MFRPQ9BY79 579 aa12.11□□□□□ -0.47
SOX6-216ENST00000533658 PSEN2P49810 448 aa12.1□□□□□ -0.47
SOX6-216ENST00000533658 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
SOX6-216ENST00000533658 Q6ZNB5 142 aa12.08□□□□□ -0.48
SOX6-216ENST00000533658 A0A0G2JS52 829 aa12.07□□□□□ -0.48
SOX6-216ENST00000533658 PTPN5P54829 565 aa12.07□□□□□ -0.48
SOX6-216ENST00000533658 TMC2Q8TDI7 906 aa12.07□□□□□ -0.48
SOX6-216ENST00000533658 DNAJC5Q9H3Z4 198 aa12.07□□□□□ -0.48
SOX6-216ENST00000533658 KDM4FA0A1W2PPD8 638 aa12.06□□□□□ -0.48
SOX6-216ENST00000533658 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
SOX6-216ENST00000533658 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
SOX6-216ENST00000533658 PPP4R3BQ5MIZ7 849 aa12.01□□□□□ -0.49
SOX6-216ENST00000533658 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
SOX6-216ENST00000533658 PTCD2Q8WV60 388 aaKnown RBP11.97□□□□□ -0.49
SOX6-216ENST00000533658 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
SOX6-216ENST00000533658 KCNH8Q96L42 1107 aa11.94□□□□□ -0.5
SOX6-216ENST00000533658 VPS9D1Q9Y2B5 631 aa11.93□□□□□ -0.5
SOX6-216ENST00000533658 STK25O00506 426 aa11.92□□□□□ -0.5
SOX6-216ENST00000533658 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
SOX6-216ENST00000533658 LCE2BO14633 110 aa11.84□□□□□ -0.51
SOX6-216ENST00000533658 FOXK1P85037 733 aa11.84□□□□□ -0.51
SOX6-216ENST00000533658 PLPP6Q8IY26 295 aa11.84□□□□□ -0.51
SOX6-216ENST00000533658 SLC4A5Q9BY07 1137 aa11.84□□□□□ -0.51
SOX6-216ENST00000533658 CUX2O14529 1486 aa11.83□□□□□ -0.52
SOX6-216ENST00000533658 TBC1D12O60347 775 aa11.83□□□□□ -0.52
SOX6-216ENST00000533658 PPP1R37O75864 691 aa11.83□□□□□ -0.52
SOX6-216ENST00000533658 LAPTM4AQ15012 233 aa11.81□□□□□ -0.52
SOX6-216ENST00000533658 BHMG1C9JSJ3 638 aaPredicted RBP11.8□□□□□ -0.52
SOX6-216ENST00000533658 WNT2BQ93097 391 aa11.8□□□□□ -0.52
SOX6-216ENST00000533658 GOLGA8CPA6NN73 597 aa11.79□□□□□ -0.52
SOX6-216ENST00000533658 TRAF7Q6Q0C0 670 aa11.79□□□□□ -0.52
SOX6-216ENST00000533658 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
SOX6-216ENST00000533658 ERCC6Q03468 1493 aa11.77□□□□□ -0.52
SOX6-216ENST00000533658 DSG2Q14126 1118 aa11.75□□□□□ -0.53
SOX6-216ENST00000533658 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
SOX6-216ENST00000533658 ZNF454Q8N9F8 522 aa11.75□□□□□ -0.53
SOX6-216ENST00000533658 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
SOX6-216ENST00000533658 NCAPD3P42695 1498 aa11.75□□□□□ -0.53
SOX6-216ENST00000533658 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
SOX6-216ENST00000533658 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
SOX6-216ENST00000533658 PTPREP23469 700 aa11.7□□□□□ -0.54
SOX6-216ENST00000533658 ATAD2BQ9ULI0 1458 aa11.69□□□□□ -0.54
SOX6-216ENST00000533658 OXER1Q8TDS5 423 aa11.68□□□□□ -0.54
SOX6-216ENST00000533658 NBPF3Q9H094 633 aa11.68□□□□□ -0.54
SOX6-216ENST00000533658 FOSBP53539 338 aa11.67□□□□□ -0.54
SOX6-216ENST00000533658 GFRA3O60609 400 aa11.66□□□□□ -0.54
SOX6-216ENST00000533658 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.54
SOX6-216ENST00000533658 NESP48681 1621 aa11.65□□□□□ -0.54
SOX6-216ENST00000533658 ECM2O94769 699 aaPredicted RBP11.65□□□□□ -0.54
SOX6-216ENST00000533658 HMGXB3Q12766 1538 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms