RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 ARHGEF40Q8TER5 1519 aa35.8■■■■□ 3.32
BEST1-207ENST00000533521 POGZQ7Z3K3 1410 aa35.79■■■■□ 3.32
BEST1-207ENST00000533521 ARHGAP5Q13017 1502 aa35.77■■■■□ 3.32
BEST1-207ENST00000533521 CDC42BPBQ9Y5S2 1711 aa35.77■■■■□ 3.32
BEST1-207ENST00000533521 PREX2Q70Z35 1606 aa35.75■■■■□ 3.31
BEST1-207ENST00000533521 ZFYVE16Q7Z3T8 1539 aa35.69■■■■□ 3.3
BEST1-207ENST00000533521 ZNF518AQ6AHZ1 1483 aa35.68■■■■□ 3.3
BEST1-207ENST00000533521 CDC42BPAQ5VT25 1732 aa35.68■■■■□ 3.3
BEST1-207ENST00000533521 ADAMTSL3P82987 1691 aa35.67■■■■□ 3.3
BEST1-207ENST00000533521 BCORL1Q5H9F3 1711 aa35.64■■■■□ 3.3
BEST1-207ENST00000533521 LOC105371045A0A1W2PR82 267 aa35.64■■■■□ 3.3
BEST1-207ENST00000533521 KDM5CP41229 1560 aa35.64■■■■□ 3.3
BEST1-207ENST00000533521 MTUS2Q5JR59 1369 aa35.62■■■■□ 3.29
BEST1-207ENST00000533521 YEATS2Q9ULM3 1422 aa35.61■■■■□ 3.29
BEST1-207ENST00000533521 ABCC1P33527 1531 aa35.59■■■■□ 3.29
BEST1-207ENST00000533521 GPATCH8Q9UKJ3 1502 aaKnown RBP35.59■■■■□ 3.29
BEST1-207ENST00000533521 EHBP1L1Q8N3D4 1523 aa35.57■■■■□ 3.28
BEST1-207ENST00000533521 ARID4BQ4LE39 1312 aaPredicted RBP35.56■■■■□ 3.28
BEST1-207ENST00000533521 ATP10AO60312 1499 aa35.55■■■■□ 3.28
BEST1-207ENST00000533521 VPS8Q8N3P4 1428 aa35.53■■■■□ 3.28
BEST1-207ENST00000533521 MLH3Q9UHC1 1453 aa35.53■■■■□ 3.28
BEST1-207ENST00000533521 ITSN2Q9NZM3 1697 aa35.52■■■■□ 3.28
BEST1-207ENST00000533521 AFAP1Q8N556 730 aa35.52■■■■□ 3.28
BEST1-207ENST00000533521 ARHGEF12Q9NZN5 1544 aa35.51■■■■□ 3.27
BEST1-207ENST00000533521 HECW2Q9P2P5 1572 aa35.51■■■■□ 3.27
BEST1-207ENST00000533521 CCNB3Q8WWL7 1395 aa35.5■■■■□ 3.27
BEST1-207ENST00000533521 C9orf84Q5VXU9 1444 aa35.49■■■■□ 3.27
BEST1-207ENST00000533521 PTPRMP28827 1452 aa35.48■■■■□ 3.27
BEST1-207ENST00000533521 KIAA1107Q9UPP5 1409 aa35.47■■■■□ 3.27
BEST1-207ENST00000533521 PLEKHH2Q8IVE3 1493 aa35.47■■■■□ 3.27
BEST1-207ENST00000533521 SAMD9LQ8IVG5 1584 aa35.47■■■■□ 3.27
BEST1-207ENST00000533521 TRAPPC8Q9Y2L5 1435 aa35.46■■■■□ 3.27
BEST1-207ENST00000533521 MADDQ8WXG6 1647 aa35.46■■■■□ 3.27
BEST1-207ENST00000533521 SIGLEC1Q9BZZ2 1709 aa35.46■■■■□ 3.27
BEST1-207ENST00000533521 REREQ9P2R6 1566 aa35.45■■■■□ 3.27
BEST1-207ENST00000533521 CFDP1Q9UEE9 299 aaPredicted RBP35.44■■■■□ 3.26
BEST1-207ENST00000533521 TIAM1Q13009 1591 aa35.42■■■■□ 3.26
BEST1-207ENST00000533521 MAP3K1Q13233 1512 aa35.41■■■■□ 3.26
BEST1-207ENST00000533521 DIP2CQ9Y2E4 1556 aa35.4■■■■□ 3.26
BEST1-207ENST00000533521 SUPT6HQ7KZ85 1726 aaKnown RBP35.37■■■■□ 3.25
BEST1-207ENST00000533521 ZNF777Q9ULD5 760 aaPredicted RBP35.36■■■■□ 3.25
BEST1-207ENST00000533521 SYCP2Q9BX26 1530 aa35.36■■■■□ 3.25
BEST1-207ENST00000533521 KIDINS220Q9ULH0 1771 aa35.35■■■■□ 3.25
BEST1-207ENST00000533521 ABCA6Q8N139 1617 aa35.34■■■■□ 3.25
BEST1-207ENST00000533521 RIMS1Q86UR5 1692 aaKnown RBP35.33■■■■□ 3.25
BEST1-207ENST00000533521 AGLP35573 1532 aa35.32■■■■□ 3.24
BEST1-207ENST00000533521 MYT1LQ9UL68 1186 aa35.31■■■■□ 3.24
BEST1-207ENST00000533521 NCOA2Q15596 1464 aa35.3■■■■□ 3.24
BEST1-207ENST00000533521 LRRC9Q6ZRR7 1453 aa35.29■■■■□ 3.24
BEST1-207ENST00000533521 HNRNPMP52272 730 aaKnown RBP eCLIP35.28■■■■□ 3.24
BEST1-207ENST00000533521 FER1L4A9Z1Z3 1794 aa35.28■■■■□ 3.24
BEST1-207ENST00000533521 SPAG9O60271 1321 aaKnown RBP35.26■■■■□ 3.23
BEST1-207ENST00000533521 MBD5Q9P267 1494 aa35.22■■■■□ 3.23
BEST1-207ENST00000533521 INO80Q9ULG1 1556 aaPredicted RBP35.21■■■■□ 3.23
BEST1-207ENST00000533521 ATP7AQ04656 1500 aa35.21■■■■□ 3.23
BEST1-207ENST00000533521 MLECQ14165 292 aa35.2■■■■□ 3.23
BEST1-207ENST00000533521 ZNF644Q9H582 1327 aaPredicted RBP35.17■■■■□ 3.22
BEST1-207ENST00000533521 RSPH4AQ5TD94 716 aa35.17■■■■□ 3.22
BEST1-207ENST00000533521 RTEL1-TNFRSF6BF6WH68 1400 aa35.15■■■■□ 3.22
BEST1-207ENST00000533521 CAMSAP2Q08AD1 1489 aa35.1■■■■□ 3.21
BEST1-207ENST00000533521 PLXNC1O60486 1568 aa35.09■■■■□ 3.21
BEST1-207ENST00000533521 KANK4Q5T7N3 995 aaPredicted RBP35.09■■■■□ 3.21
BEST1-207ENST00000533521 ADGBQ8N7X0 1667 aa35.08■■■■□ 3.21
BEST1-207ENST00000533521 A2MP01023 1474 aa35.07■■■■□ 3.2
BEST1-207ENST00000533521 LMTK3Q96Q04 1460 aa35.07■■■■□ 3.2
BEST1-207ENST00000533521 ARHGEF5Q12774 1597 aa35.06■■■■□ 3.2
BEST1-207ENST00000533521 CCDC141Q6ZP82 1450 aa35.06■■■■□ 3.2
BEST1-207ENST00000533521 MIA2Q96PC5 1412 aa35.06■■■■□ 3.2
BEST1-207ENST00000533521 APLP2Q06481 763 aa35.05■■■■□ 3.2
BEST1-207ENST00000533521 CNTLNQ9NXG0 1405 aa35.04■■■■□ 3.2
BEST1-207ENST00000533521 SETD1BQ9UPS6 1966 aaKnown RBP35.02■■■■□ 3.2
BEST1-207ENST00000533521 MYOM3Q5VTT5 1437 aa35.01■■■■□ 3.2
BEST1-207ENST00000533521 ESF1Q9H501 851 aaKnown RBP34.98■■■■□ 3.19
BEST1-207ENST00000533521 PPP6R1Q9UPN7 881 aa34.95■■■■□ 3.19
BEST1-207ENST00000533521 MROH2AA6NES4 1674 aa34.95■■■■□ 3.18
BEST1-207ENST00000533521 C3P01024 1663 aa34.94■■■■□ 3.18
BEST1-207ENST00000533521 PREX1Q8TCU6 1659 aa34.93■■■■□ 3.18
BEST1-207ENST00000533521 DHX29Q7Z478 1369 aaKnown RBP34.93■■■■□ 3.18
BEST1-207ENST00000533521 TSPY4P0CV99 314 aa34.91■■■■□ 3.18
BEST1-207ENST00000533521 TSPY10P0CW01 314 aa34.91■■■■□ 3.18
BEST1-207ENST00000533521 CEBPAP49715 358 aaPredicted RBP34.9■■■■□ 3.18
BEST1-207ENST00000533521 PLPPR3Q6T4P5 718 aa34.89■■■■□ 3.18
BEST1-207ENST00000533521 MAST1Q9Y2H9 1570 aa34.88■■■■□ 3.17
BEST1-207ENST00000533521 NPATQ14207 1427 aa34.81■■■■□ 3.16
BEST1-207ENST00000533521 FAM135AQ9P2D6 1515 aa34.81■■■■□ 3.16
BEST1-207ENST00000533521 ZMYM3Q14202 1370 aa34.8■■■■□ 3.16
BEST1-207ENST00000533521 UHRF1BP1Q6BDS2 1440 aa34.8■■■■□ 3.16
BEST1-207ENST00000533521 CLTCQ00610 1675 aaKnown RBP34.77■■■■□ 3.16
BEST1-207ENST00000533521 GGT6Q6P531 493 aa34.77■■■■□ 3.16
BEST1-207ENST00000533521 PTPN23Q9H3S7 1636 aa34.76■■■■□ 3.15
BEST1-207ENST00000533521 HSPA2P54652 639 aa34.75■■■■□ 3.15
BEST1-207ENST00000533521 FGD6Q6ZV73 1430 aa34.74■■■■□ 3.15
BEST1-207ENST00000533521 TCOF1Q13428 1488 aaKnown RBP34.74■■■■□ 3.15
BEST1-207ENST00000533521 SHANK2Q9UPX8 1470 aa34.71■■■■□ 3.15
BEST1-207ENST00000533521 KIF3BO15066 747 aa34.71■■■■□ 3.15
BEST1-207ENST00000533521 CROCC2H7BZ55 1655 aa34.67■■■■□ 3.14
BEST1-207ENST00000533521 EIF2AK4Q9P2K8 1649 aaKnown RBP34.67■■■■□ 3.14
BEST1-207ENST00000533521 ABCC5O15440 1437 aa34.65■■■■□ 3.14
BEST1-207ENST00000533521 PTPRKQ15262 1439 aa34.65■■■■□ 3.14
BEST1-207ENST00000533521 DNMT1P26358 1616 aaKnown RBP34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms