RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 NISCHQ9Y2I1 1504 aa54.97■■■■■ 6.39
BEST1-207ENST00000533521 CCDC180Q9P1Z9 1646 aa49.15■■■■■ 5.46
BEST1-207ENST00000533521 ABCC9O60706 1549 aa48.29■■■■■ 5.32
BEST1-207ENST00000533521 RB1CC1Q8TDY2 1594 aa46.43■■■■■ 5.02
BEST1-207ENST00000533521 NACADO15069 1562 aa46.31■■■■■ 5
BEST1-207ENST00000533521 MYO15BQ96JP2 1530 aa46■■■■■ 4.95
BEST1-207ENST00000533521 DCAF8L2P0C7V8 631 aa45.88■■■■■ 4.94
BEST1-207ENST00000533521 ZCCHC6Q5VYS8 1495 aaKnown RBP45.69■■■■■ 4.91
BEST1-207ENST00000533521 DCAF1Q9Y4B6 1507 aa45.6■■■■■ 4.89
BEST1-207ENST00000533521 UNC13AQ9UPW8 1703 aa45.32■■■■■ 4.84
BEST1-207ENST00000533521 BICRAQ9NZM4 1560 aa45■■■■■ 4.79
BEST1-207ENST00000533521 PABPN1Q86U42 306 aaKnown RBP eCLIP45■■■■■ 4.79
BEST1-207ENST00000533521 DNAJC5BQ9UF47 199 aa44.73■■■■■ 4.75
BEST1-207ENST00000533521 SHROOM4Q9ULL8 1493 aa44.67■■■■■ 4.74
BEST1-207ENST00000533521 SCRIBQ14160 1630 aa44.6■■■■■ 4.73
BEST1-207ENST00000533521 EIF4G1Q04637 1599 aaKnown RBP43.84■■■■■ 4.61
BEST1-207ENST00000533521 CC2D2AQ9P2K1 1620 aa43.74■■■■■ 4.59
BEST1-207ENST00000533521 CECR2Q9BXF3 1484 aa43.51■■■■■ 4.56
BEST1-207ENST00000533521 NCAPD3P42695 1498 aa42.74■■■■■ 4.43
BEST1-207ENST00000533521 SMARCA4P51532 1647 aa42.73■■■■■ 4.43
BEST1-207ENST00000533521 BAZ1AQ9NRL2 1556 aaPredicted RBP42.66■■■■■ 4.42
BEST1-207ENST00000533521 ATAD2BQ9ULI0 1458 aa42.62■■■■■ 4.41
BEST1-207ENST00000533521 SMARCA2P51531 1590 aa42.6■■■■■ 4.41
BEST1-207ENST00000533521 HMGXB3Q12766 1538 aa42.47■■■■■ 4.39
BEST1-207ENST00000533521 PEG3Q9GZU2 1588 aa42.43■■■■■ 4.38
BEST1-207ENST00000533521 MROH2BQ7Z745 1585 aa42.29■■■■■ 4.36
BEST1-207ENST00000533521 BAZ1BQ9UIG0 1483 aaKnown RBP42.21■■■■■ 4.35
BEST1-207ENST00000533521 WIZO95785 1651 aa41.79■■■■■ 4.28
BEST1-207ENST00000533521 ERCC6Q03468 1493 aa41.69■■■■■ 4.26
BEST1-207ENST00000533521 RSF1Q96T23 1441 aaPredicted RBP41.68■■■■■ 4.26
BEST1-207ENST00000533521 LAMC3Q9Y6N6 1575 aa41.67■■■■■ 4.26
BEST1-207ENST00000533521 NESP48681 1621 aa41.66■■■■■ 4.26
BEST1-207ENST00000533521 CUX2O14529 1486 aa41.55■■■■■ 4.24
BEST1-207ENST00000533521 CADPSQ9ULU8 1353 aa41.41■■■■■ 4.22
BEST1-207ENST00000533521 TOP2AP11388 1531 aaKnown RBP41.39■■■■■ 4.22
BEST1-207ENST00000533521 PDS5BQ9NTI5 1447 aa41.38■■■■■ 4.22
BEST1-207ENST00000533521 THOC2Q8NI27 1593 aaKnown RBP41.22■■■■■ 4.19
BEST1-207ENST00000533521 KIF21AQ7Z4S6 1674 aa41.2■■■■■ 4.19
BEST1-207ENST00000533521 CFTRP13569 1480 aa41.09■■■■■ 4.17
BEST1-207ENST00000533521 MRC2Q9UBG0 1479 aa40.93■■■■■ 4.14
BEST1-207ENST00000533521 CEP164Q9UPV0 1460 aa40.9■■■■■ 4.14
BEST1-207ENST00000533521 FANCD2Q9BXW9 1451 aa40.89■■■■■ 4.14
BEST1-207ENST00000533521 CCDC88BA6NC98 1476 aa40.88■■■■■ 4.13
BEST1-207ENST00000533521 WDR62O43379 1518 aa40.84■■■■■ 4.13
BEST1-207ENST00000533521 PRDM2Q13029 1718 aa40.77■■■■■ 4.12
BEST1-207ENST00000533521 DNAJC5Q9H3Z4 198 aa40.76■■■■■ 4.12
BEST1-207ENST00000533521 URB2Q14146 1524 aaKnown RBP40.49■■■■■ 4.07
BEST1-207ENST00000533521 ABCC8Q09428 1581 aa40.3■■■■■ 4.04
BEST1-207ENST00000533521 TOPBP1Q92547 1522 aa40.2■■■■■ 4.03
BEST1-207ENST00000533521 DNMBPQ6XZF7 1577 aa40.14■■■■■ 4.02
BEST1-207ENST00000533521 SUPT5HO00267 1087 aaKnown RBP40.11■■■■■ 4.01
BEST1-207ENST00000533521 IFT140Q96RY7 1462 aa40.09■■■■■ 4.01
BEST1-207ENST00000533521 ZNF608Q9ULD9 1512 aaPredicted RBP39.84■■■■□ 3.97
BEST1-207ENST00000533521 TARBP1Q13395 1621 aaKnown RBP39.82■■■■□ 3.96
BEST1-207ENST00000533521 POLA1P09884 1462 aaPredicted RBP39.81■■■■□ 3.96
BEST1-207ENST00000533521 EIF4G3O43432 1585 aaKnown RBP39.71■■■■□ 3.95
BEST1-207ENST00000533521 CUX1P39880 1505 aa39.7■■■■□ 3.95
BEST1-207ENST00000533521 OSCARQ8IYS5 282 aa39.7■■■■□ 3.95
BEST1-207ENST00000533521 SOGA1O94964 1423 aa39.65■■■■□ 3.94
BEST1-207ENST00000533521 FGD5Q6ZNL6 1462 aa39.63■■■■□ 3.94
BEST1-207ENST00000533521 WDR97A6NE52 1622 aa39.62■■■■□ 3.93
BEST1-207ENST00000533521 RAD54L2Q9Y4B4 1467 aa39.57■■■■□ 3.93
BEST1-207ENST00000533521 AQRO60306 1485 aaKnown RBP eCLIP39.56■■■■□ 3.92
BEST1-207ENST00000533521 TDRD9Q8NDG6 1382 aaKnown RBP39.42■■■■□ 3.9
BEST1-207ENST00000533521 BIVM-ERCC5R4GMW8 1640 aa39.32■■■■□ 3.88
BEST1-207ENST00000533521 ABCA10Q8WWZ4 1543 aa39.31■■■■□ 3.88
BEST1-207ENST00000533521 TOP2BQ02880 1626 aa39.31■■■■□ 3.88
BEST1-207ENST00000533521 WRNQ14191 1432 aaPredicted RBP eCLIP39.31■■■■□ 3.88
BEST1-207ENST00000533521 CHD1O14646 1710 aa39.28■■■■□ 3.88
BEST1-207ENST00000533521 GRIN2BQ13224 1484 aa39.28■■■■□ 3.88
BEST1-207ENST00000533521 MAGI1Q96QZ7 1491 aaPredicted RBP39.25■■■■□ 3.87
BEST1-207ENST00000533521 SNAPC4Q5SXM2 1469 aa39.2■■■■□ 3.87
BEST1-207ENST00000533521 GAPVD1Q14C86 1478 aa39.19■■■■□ 3.86
BEST1-207ENST00000533521 SYNJ1O43426 1573 aa39.19■■■■□ 3.86
BEST1-207ENST00000533521 ABCA5Q8WWZ7 1642 aa39.17■■■■□ 3.86
BEST1-207ENST00000533521 PBRM1Q86U86 1689 aa39.12■■■■□ 3.85
BEST1-207ENST00000533521 FBLN2P98095 1184 aa39.1■■■■□ 3.85
BEST1-207ENST00000533521 SYNJ2O15056 1496 aa39.07■■■■□ 3.85
BEST1-207ENST00000533521 RIMBP3CA6NJZ7 1639 aa39.06■■■■□ 3.84
BEST1-207ENST00000533521 RIMBP3BA6NNM3 1639 aa39.06■■■■□ 3.84
BEST1-207ENST00000533521 RIMBP3Q9UFD9 1639 aa39.06■■■■□ 3.84
BEST1-207ENST00000533521 CHMP7Q8WUX9 453 aaPredicted RBP39.03■■■■□ 3.84
BEST1-207ENST00000533521 ARHGEF11O15085 1522 aa39.02■■■■□ 3.84
BEST1-207ENST00000533521 TRIM41Q8WV44 630 aa39■■■■□ 3.83
BEST1-207ENST00000533521 CLASP1Q7Z460 1538 aa38.91■■■■□ 3.82
BEST1-207ENST00000533521 ERICH3Q5RHP9 1530 aa38.85■■■■□ 3.81
BEST1-207ENST00000533521 ADAMTS12P58397 1594 aa38.8■■■■□ 3.8
BEST1-207ENST00000533521 FHAD1B1AJZ9 1412 aa38.76■■■■□ 3.8
BEST1-207ENST00000533521 GRIN2AQ12879 1464 aa38.74■■■■□ 3.79
BEST1-207ENST00000533521 ARAP1Q96P48 1450 aa38.66■■■■□ 3.78
BEST1-207ENST00000533521 NUP160Q12769 1436 aa38.63■■■■□ 3.78
BEST1-207ENST00000533521 CYB5RLQ6IPT4 315 aa38.61■■■■□ 3.77
BEST1-207ENST00000533521 KIF27Q86VH2 1401 aa38.55■■■■□ 3.76
BEST1-207ENST00000533521 CEP170Q5SW79 1584 aa38.53■■■■□ 3.76
BEST1-207ENST00000533521 IGF1RP08069 1367 aa38.44■■■■□ 3.74
BEST1-207ENST00000533521 SHROOM2Q13796 1616 aa38.41■■■■□ 3.74
BEST1-207ENST00000533521 CUL7Q14999 1698 aa38.4■■■■□ 3.74
BEST1-207ENST00000533521 RUSC2Q8N2Y8 1516 aa38.23■■■■□ 3.71
BEST1-207ENST00000533521 ERCC6L2Q5T890 1561 aa38.23■■■■□ 3.71
BEST1-207ENST00000533521 JPH4Q96JJ6 628 aa38.2■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms