RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 CCNB3Q8WWL7 1395 aa23.44■■□□□ 1.34
PUF60-221ENST00000533162 EHBP1L1Q8N3D4 1523 aa23.41■■□□□ 1.34
PUF60-221ENST00000533162 CFDP1Q9UEE9 299 aaPredicted RBP23.4■■□□□ 1.34
PUF60-221ENST00000533162 ZNF777Q9ULD5 760 aaPredicted RBP23.39■■□□□ 1.33
PUF60-221ENST00000533162 MYT1LQ9UL68 1186 aa23.38■■□□□ 1.33
PUF60-221ENST00000533162 POGZQ7Z3K3 1410 aa23.38■■□□□ 1.33
PUF60-221ENST00000533162 MAGI2Q86UL8 1455 aa23.37■■□□□ 1.33
PUF60-221ENST00000533162 GPATCH8Q9UKJ3 1502 aaKnown RBP23.36■■□□□ 1.33
PUF60-221ENST00000533162 PREX2Q70Z35 1606 aa23.36■■□□□ 1.33
PUF60-221ENST00000533162 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
PUF60-221ENST00000533162 KDM4FA0A1W2PPD8 638 aa23.35■■□□□ 1.33
PUF60-221ENST00000533162 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
PUF60-221ENST00000533162 MAP3K1Q13233 1512 aa23.34■■□□□ 1.33
PUF60-221ENST00000533162 FRMPD1Q5SYB0 1578 aa23.34■■□□□ 1.33
PUF60-221ENST00000533162 ARID4BQ4LE39 1312 aaPredicted RBP23.33■■□□□ 1.33
PUF60-221ENST00000533162 RICTORQ6R327 1708 aa23.32■■□□□ 1.32
PUF60-221ENST00000533162 PLEKHH2Q8IVE3 1493 aa23.31■■□□□ 1.32
PUF60-221ENST00000533162 CDC42BPBQ9Y5S2 1711 aa23.31■■□□□ 1.32
PUF60-221ENST00000533162 AFAP1Q8N556 730 aa23.31■■□□□ 1.32
PUF60-221ENST00000533162 ZMYM4Q5VZL5 1548 aa23.31■■□□□ 1.32
PUF60-221ENST00000533162 LRRC9Q6ZRR7 1453 aa23.3■■□□□ 1.32
PUF60-221ENST00000533162 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
PUF60-221ENST00000533162 CDC42BPAQ5VT25 1732 aa23.28■■□□□ 1.32
PUF60-221ENST00000533162 SUPT6HQ7KZ85 1726 aaKnown RBP23.28■■□□□ 1.32
PUF60-221ENST00000533162 KIAA1107Q9UPP5 1409 aa23.26■■□□□ 1.31
PUF60-221ENST00000533162 NCOA2Q15596 1464 aa23.26■■□□□ 1.31
PUF60-221ENST00000533162 ABCC1P33527 1531 aa23.26■■□□□ 1.31
PUF60-221ENST00000533162 ARHGEF40Q8TER5 1519 aa23.26■■□□□ 1.31
PUF60-221ENST00000533162 HNRNPMP52272 730 aaKnown RBP eCLIP23.24■■□□□ 1.317e-7■■■□□ 18.4
PUF60-221ENST00000533162 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
PUF60-221ENST00000533162 ITSN2Q9NZM3 1697 aa23.22■■□□□ 1.31
PUF60-221ENST00000533162 YEATS2Q9ULM3 1422 aa23.22■■□□□ 1.31
PUF60-221ENST00000533162 TRAPPC8Q9Y2L5 1435 aa23.22■■□□□ 1.31
PUF60-221ENST00000533162 ATP10AO60312 1499 aa23.22■■□□□ 1.31
PUF60-221ENST00000533162 RSPH4AQ5TD94 716 aa23.21■■□□□ 1.31
PUF60-221ENST00000533162 KDM5CP41229 1560 aa23.2■■□□□ 1.3
PUF60-221ENST00000533162 MLH3Q9UHC1 1453 aa23.2■■□□□ 1.3
PUF60-221ENST00000533162 SPAG9O60271 1321 aaKnown RBP23.2■■□□□ 1.3
PUF60-221ENST00000533162 SAMD9LQ8IVG5 1584 aa23.19■■□□□ 1.3
PUF60-221ENST00000533162 ARHGEF12Q9NZN5 1544 aa23.19■■□□□ 1.3
PUF60-221ENST00000533162 C9orf84Q5VXU9 1444 aa23.19■■□□□ 1.3
PUF60-221ENST00000533162 SYCP2Q9BX26 1530 aa23.18■■□□□ 1.3
PUF60-221ENST00000533162 HECW2Q9P2P5 1572 aa23.17■■□□□ 1.3
PUF60-221ENST00000533162 ZNF644Q9H582 1327 aaPredicted RBP23.15■■□□□ 1.3
PUF60-221ENST00000533162 MIA2Q96PC5 1412 aa23.11■■□□□ 1.29
PUF60-221ENST00000533162 TSPY4P0CV99 314 aa23.11■■□□□ 1.29
PUF60-221ENST00000533162 TSPY10P0CW01 314 aa23.11■■□□□ 1.29
PUF60-221ENST00000533162 MYOM3Q5VTT5 1437 aa23.1■■□□□ 1.29
PUF60-221ENST00000533162 MLECQ14165 292 aa23.1■■□□□ 1.29
PUF60-221ENST00000533162 CAMSAP2Q08AD1 1489 aa23.09■■□□□ 1.29
PUF60-221ENST00000533162 MBD5Q9P267 1494 aa23.07■■□□□ 1.28
PUF60-221ENST00000533162 ESF1Q9H501 851 aaKnown RBP23.07■■□□□ 1.28
PUF60-221ENST00000533162 BCORL1Q5H9F3 1711 aa23.07■■□□□ 1.28
PUF60-221ENST00000533162 DIP2CQ9Y2E4 1556 aa23.06■■□□□ 1.28
PUF60-221ENST00000533162 RTEL1-TNFRSF6BF6WH68 1400 aa23.05■■□□□ 1.28
PUF60-221ENST00000533162 REREQ9P2R6 1566 aa23.05■■□□□ 1.28
PUF60-221ENST00000533162 CCDC141Q6ZP82 1450 aa23.05■■□□□ 1.28
PUF60-221ENST00000533162 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
PUF60-221ENST00000533162 ATP7AQ04656 1500 aa23.03■■□□□ 1.28
PUF60-221ENST00000533162 KIDINS220Q9ULH0 1771 aa23.01■■□□□ 1.27
PUF60-221ENST00000533162 ABCA6Q8N139 1617 aa23.01■■□□□ 1.27
PUF60-221ENST00000533162 PTPRMP28827 1452 aa23.01■■□□□ 1.27
PUF60-221ENST00000533162 AGLP35573 1532 aa23■■□□□ 1.27
PUF60-221ENST00000533162 ARHGEF5Q12774 1597 aa22.98■■□□□ 1.27
PUF60-221ENST00000533162 A2MP01023 1474 aa22.98■■□□□ 1.27
PUF60-221ENST00000533162 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
PUF60-221ENST00000533162 MADDQ8WXG6 1647 aa22.97■■□□□ 1.27
PUF60-221ENST00000533162 FGD6Q6ZV73 1430 aa22.94■■□□□ 1.26
PUF60-221ENST00000533162 DHX29Q7Z478 1369 aaKnown RBP22.93■■□□□ 1.26
PUF60-221ENST00000533162 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
PUF60-221ENST00000533162 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
PUF60-221ENST00000533162 SIGLEC1Q9BZZ2 1709 aa22.92■■□□□ 1.26
PUF60-221ENST00000533162 PTPN23Q9H3S7 1636 aa22.9■■□□□ 1.26
PUF60-221ENST00000533162 GGT6Q6P531 493 aa22.9■■□□□ 1.26
PUF60-221ENST00000533162 RIMS1Q86UR5 1692 aaKnown RBP22.9■■□□□ 1.26
PUF60-221ENST00000533162 ADGBQ8N7X0 1667 aa22.9■■□□□ 1.26
PUF60-221ENST00000533162 CNTLNQ9NXG0 1405 aa22.9■■□□□ 1.26
PUF60-221ENST00000533162 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
PUF60-221ENST00000533162 FER1L4A9Z1Z3 1794 aa22.88■■□□□ 1.25
PUF60-221ENST00000533162 TCOF1Q13428 1488 aaKnown RBP22.87■■□□□ 1.25
PUF60-221ENST00000533162 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
PUF60-221ENST00000533162 KIF3BO15066 747 aa22.86■■□□□ 1.25
PUF60-221ENST00000533162 MAST1Q9Y2H9 1570 aa22.84■■□□□ 1.25
PUF60-221ENST00000533162 SHANK2Q9UPX8 1470 aa22.83■■□□□ 1.25
PUF60-221ENST00000533162 ABCC5O15440 1437 aa22.82■■□□□ 1.24
PUF60-221ENST00000533162 DAPK1P53355 1430 aa22.82■■□□□ 1.24
PUF60-221ENST00000533162 PPARGC1BQ86YN6 1023 aaKnown RBP22.81■■□□□ 1.24
PUF60-221ENST00000533162 CEBPAP49715 358 aaPredicted RBP22.8■■□□□ 1.24
PUF60-221ENST00000533162 ANKRD30AQ9BXX3 1397 aa22.79■■□□□ 1.24
PUF60-221ENST00000533162 RRP7BPQ9NSQ0 103 aa22.78■■□□□ 1.24
PUF60-221ENST00000533162 CHIC2Q9UKJ5 165 aa22.77■■□□□ 1.24
PUF60-221ENST00000533162 WASHC2CQ9Y4E1 1318 aa22.77■■□□□ 1.24
PUF60-221ENST00000533162 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
PUF60-221ENST00000533162 KIF15Q9NS87 1388 aa22.76■■□□□ 1.23
PUF60-221ENST00000533162 DNMT1P26358 1616 aaKnown RBP22.76■■□□□ 1.23
PUF60-221ENST00000533162 DUOX2Q9NRD8 1548 aa22.75■■□□□ 1.23
PUF60-221ENST00000533162 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
PUF60-221ENST00000533162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.71■■□□□ 1.231e-6■■■□□ 17.2
PUF60-221ENST00000533162 ERBINQ96RT1 1412 aa22.71■■□□□ 1.23
PUF60-221ENST00000533162 CROCC2H7BZ55 1655 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms