RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 EFCAB2Q5VUJ9 269 aa34.71■■■■□ 3.15
LRRK1-208ENST00000532029 GPATCH8Q9UKJ3 1502 aaKnown RBP34.69■■■■□ 3.14
LRRK1-208ENST00000532029 KDM6BO15054 1643 aa34.69■■■■□ 3.14
LRRK1-208ENST00000532029 CDC42BPAQ5VT25 1732 aa34.69■■■■□ 3.14
LRRK1-208ENST00000532029 AKNAQ7Z591 1439 aa34.66■■■■□ 3.14
LRRK1-208ENST00000532029 CDC42BPBQ9Y5S2 1711 aa34.65■■■■□ 3.14
LRRK1-208ENST00000532029 ITSN2Q9NZM3 1697 aa34.63■■■■□ 3.13
LRRK1-208ENST00000532029 CFDP1Q9UEE9 299 aaPredicted RBP34.62■■■■□ 3.13
LRRK1-208ENST00000532029 ZNF777Q9ULD5 760 aaPredicted RBP34.58■■■■□ 3.13
LRRK1-208ENST00000532029 ADGRL1O94910 1474 aa34.58■■■■□ 3.13
LRRK1-208ENST00000532029 COL17A1Q9UMD9 1497 aaPredicted RBP34.57■■■■□ 3.12
LRRK1-208ENST00000532029 PPARGC1BQ86YN6 1023 aaKnown RBP34.52■■■■□ 3.12
LRRK1-208ENST00000532029 SCAPERQ9BY12 1400 aa34.52■■■■□ 3.12
LRRK1-208ENST00000532029 DENND4BO75064 1496 aaPredicted RBP34.52■■■■□ 3.12
LRRK1-208ENST00000532029 MYOM3Q5VTT5 1437 aa34.51■■■■□ 3.12
LRRK1-208ENST00000532029 SAMD9LQ8IVG5 1584 aa34.48■■■■□ 3.11
LRRK1-208ENST00000532029 ABCC1P33527 1531 aa34.47■■■■□ 3.11
LRRK1-208ENST00000532029 PLEKHH2Q8IVE3 1493 aa34.46■■■■□ 3.11
LRRK1-208ENST00000532029 RAPGEF3O95398 923 aa34.46■■■■□ 3.11
LRRK1-208ENST00000532029 MIA2Q96PC5 1412 aa34.43■■■■□ 3.1
LRRK1-208ENST00000532029 POGZQ7Z3K3 1410 aa34.42■■■■□ 3.1
LRRK1-208ENST00000532029 ZNF644Q9H582 1327 aaPredicted RBP34.4■■■■□ 3.1
LRRK1-208ENST00000532029 KIAA1107Q9UPP5 1409 aa34.39■■■■□ 3.1
LRRK1-208ENST00000532029 RICTORQ6R327 1708 aa34.39■■■■□ 3.1
LRRK1-208ENST00000532029 FRMPD1Q5SYB0 1578 aa34.39■■■■□ 3.1
LRRK1-208ENST00000532029 SYCP2Q9BX26 1530 aa34.39■■■■□ 3.1
LRRK1-208ENST00000532029 ARHGEF12Q9NZN5 1544 aa34.39■■■■□ 3.1
LRRK1-208ENST00000532029 CAMSAP2Q08AD1 1489 aa34.39■■■■□ 3.1
LRRK1-208ENST00000532029 HNRNPMP52272 730 aaKnown RBP eCLIP34.37■■■■□ 3.09
LRRK1-208ENST00000532029 ZNF518AQ6AHZ1 1483 aa34.36■■■■□ 3.09
LRRK1-208ENST00000532029 FGD6Q6ZV73 1430 aa34.36■■■■□ 3.09
LRRK1-208ENST00000532029 TRAPPC8Q9Y2L5 1435 aa34.33■■■■□ 3.09
LRRK1-208ENST00000532029 AFAP1Q8N556 730 aa34.32■■■■□ 3.08
LRRK1-208ENST00000532029 PTPN23Q9H3S7 1636 aa34.3■■■■□ 3.08
LRRK1-208ENST00000532029 ZMYM4Q5VZL5 1548 aa34.3■■■■□ 3.08
LRRK1-208ENST00000532029 KDM5CP41229 1560 aa34.27■■■■□ 3.08
LRRK1-208ENST00000532029 MBD5Q9P267 1494 aa34.27■■■■□ 3.08
LRRK1-208ENST00000532029 MYT1LQ9UL68 1186 aa34.26■■■■□ 3.08
LRRK1-208ENST00000532029 RSPH4AQ5TD94 716 aa34.24■■■■□ 3.07
LRRK1-208ENST00000532029 TCOF1Q13428 1488 aaKnown RBP34.24■■■■□ 3.07
LRRK1-208ENST00000532029 MAGI2Q86UL8 1455 aa34.24■■■■□ 3.07
LRRK1-208ENST00000532029 CCDC141Q6ZP82 1450 aa34.21■■■■□ 3.07
LRRK1-208ENST00000532029 ARHGEF5Q12774 1597 aa34.21■■■■□ 3.07
LRRK1-208ENST00000532029 ZFYVE16Q7Z3T8 1539 aa34.2■■■■□ 3.07
LRRK1-208ENST00000532029 HECW2Q9P2P5 1572 aa34.2■■■■□ 3.07
LRRK1-208ENST00000532029 SPAG9O60271 1321 aaKnown RBP34.19■■■■□ 3.06
LRRK1-208ENST00000532029 FAM50AQ14320 339 aaKnown RBP34.18■■■■□ 3.06
LRRK1-208ENST00000532029 MLH3Q9UHC1 1453 aa34.18■■■■□ 3.06
LRRK1-208ENST00000532029 ARHGEF40Q8TER5 1519 aa34.16■■■■□ 3.06
LRRK1-208ENST00000532029 YEATS2Q9ULM3 1422 aa34.14■■■■□ 3.06
LRRK1-208ENST00000532029 TSPY4P0CV99 314 aa34.13■■■■□ 3.05
LRRK1-208ENST00000532029 TSPY10P0CW01 314 aa34.13■■■■□ 3.05
LRRK1-208ENST00000532029 AEBP2Q6ZN18 517 aaPredicted RBP34.1■■■■□ 3.05
LRRK1-208ENST00000532029 ATP7AQ04656 1500 aa34.09■■■■□ 3.05
LRRK1-208ENST00000532029 INO80Q9ULG1 1556 aaPredicted RBP34.08■■■■□ 3.05
LRRK1-208ENST00000532029 KIDINS220Q9ULH0 1771 aa34.08■■■■□ 3.05
LRRK1-208ENST00000532029 RTEL1-TNFRSF6BF6WH68 1400 aa34.07■■■■□ 3.04
LRRK1-208ENST00000532029 DNMT1P26358 1616 aaKnown RBP34.07■■■■□ 3.04
LRRK1-208ENST00000532029 ATP10AO60312 1499 aa34.06■■■■□ 3.04
LRRK1-208ENST00000532029 ABCC5O15440 1437 aa34.05■■■■□ 3.04
LRRK1-208ENST00000532029 DAPK1P53355 1430 aa34.05■■■■□ 3.04
LRRK1-208ENST00000532029 RRBP1Q9P2E9 1410 aaKnown RBP34.05■■■■□ 3.04
LRRK1-208ENST00000532029 DIP2CQ9Y2E4 1556 aa34.04■■■■□ 3.04
LRRK1-208ENST00000532029 KDM4FA0A1W2PPD8 638 aa34.04■■■■□ 3.04
LRRK1-208ENST00000532029 ABCA6Q8N139 1617 aa34.04■■■■□ 3.04
LRRK1-208ENST00000532029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.03■■■■□ 3.04
LRRK1-208ENST00000532029 C9orf84Q5VXU9 1444 aa34.02■■■■□ 3.04
LRRK1-208ENST00000532029 MAST1Q9Y2H9 1570 aa34.02■■■■□ 3.04
LRRK1-208ENST00000532029 SHANK2Q9UPX8 1470 aa34.01■■■■□ 3.03
LRRK1-208ENST00000532029 CROCC2H7BZ55 1655 aa34■■■■□ 3.03
LRRK1-208ENST00000532029 ARID4BQ4LE39 1312 aaPredicted RBP33.96■■■■□ 3.03
LRRK1-208ENST00000532029 REREQ9P2R6 1566 aa33.93■■■■□ 3.02
LRRK1-208ENST00000532029 CHIC2Q9UKJ5 165 aa33.92■■■■□ 3.02
LRRK1-208ENST00000532029 ADGBQ8N7X0 1667 aa33.92■■■■□ 3.02
LRRK1-208ENST00000532029 ITGAEP38570 1179 aa33.91■■■■□ 3.02
LRRK1-208ENST00000532029 A2MP01023 1474 aa33.9■■■■□ 3.02
LRRK1-208ENST00000532029 PLXNC1O60486 1568 aa33.88■■■■□ 3.01
LRRK1-208ENST00000532029 ANKRD30AQ9BXX3 1397 aa33.86■■■■□ 3.01
LRRK1-208ENST00000532029 SIGLEC1Q9BZZ2 1709 aa33.84■■■■□ 3.01
LRRK1-208ENST00000532029 DHX29Q7Z478 1369 aaKnown RBP33.84■■■■□ 3.01
LRRK1-208ENST00000532029 PTPRKQ15262 1439 aa33.83■■■■□ 3.01
LRRK1-208ENST00000532029 AGLP35573 1532 aa33.83■■■■□ 3.01
LRRK1-208ENST00000532029 ADGRL2O95490 1459 aa33.82■■■■□ 3.01
LRRK1-208ENST00000532029 KIF15Q9NS87 1388 aa33.82■■■■□ 3
LRRK1-208ENST00000532029 RRP7BPQ9NSQ0 103 aa33.81■■■■□ 3
LRRK1-208ENST00000532029 NCOA1Q15788 1441 aa33.79■■■■□ 3
LRRK1-208ENST00000532029 MLECQ14165 292 aa33.78■■■■□ 3
LRRK1-208ENST00000532029 DUOX2Q9NRD8 1548 aa33.78■■■■□ 3
LRRK1-208ENST00000532029 BCORL1Q5H9F3 1711 aa33.76■■■□□ 2.99
LRRK1-208ENST00000532029 ROCK1Q13464 1354 aa33.74■■■□□ 2.99
LRRK1-208ENST00000532029 KIF3BO15066 747 aa33.7■■■□□ 2.99
LRRK1-208ENST00000532029 ERBINQ96RT1 1412 aa33.68■■■□□ 2.98
LRRK1-208ENST00000532029 ADAMTSL3P82987 1691 aa33.66■■■□□ 2.98
LRRK1-208ENST00000532029 EIF2AK4Q9P2K8 1649 aaKnown RBP33.66■■■□□ 2.98
LRRK1-208ENST00000532029 GGT6Q6P531 493 aa33.65■■■□□ 2.98
LRRK1-208ENST00000532029 ANKRD50Q9ULJ7 1429 aa33.62■■■□□ 2.97
LRRK1-208ENST00000532029 ESF1Q9H501 851 aaKnown RBP33.61■■■□□ 2.97
LRRK1-208ENST00000532029 MADDQ8WXG6 1647 aa33.61■■■□□ 2.97
LRRK1-208ENST00000532029 FER1L4A9Z1Z3 1794 aa33.57■■■□□ 2.97
LRRK1-208ENST00000532029 RNF17Q9BXT8 1623 aaKnown RBP33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms