RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
RPUSD4-205ENST00000530903 EPRSP07814 1512 aaKnown RBP15.59■□□□□ 0.09
RPUSD4-205ENST00000530903 ABCC2Q92887 1545 aa15.59■□□□□ 0.09
RPUSD4-205ENST00000530903 ADCY10Q96PN6 1610 aa15.58■□□□□ 0.08
RPUSD4-205ENST00000530903 MAP3K1Q13233 1512 aa15.57■□□□□ 0.08
RPUSD4-205ENST00000530903 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
RPUSD4-205ENST00000530903 UHRF1BP1LA0JNW5 1464 aa15.55■□□□□ 0.08
RPUSD4-205ENST00000530903 ZBTB22O15209 634 aa15.55■□□□□ 0.08
RPUSD4-205ENST00000530903 KANK4Q5T7N3 995 aaPredicted RBP15.54■□□□□ 0.08
RPUSD4-205ENST00000530903 ATP10BO94823 1461 aa15.53■□□□□ 0.08
RPUSD4-205ENST00000530903 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.08
RPUSD4-205ENST00000530903 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.08
RPUSD4-205ENST00000530903 ZCCHC11Q5TAX3 1644 aaKnown RBP15.52■□□□□ 0.08
RPUSD4-205ENST00000530903 MAGI3Q5TCQ9 1506 aa15.51■□□□□ 0.07
RPUSD4-205ENST00000530903 EVX2Q03828 476 aa15.5■□□□□ 0.07
RPUSD4-205ENST00000530903 KDM5BQ9UGL1 1544 aa15.49■□□□□ 0.07
RPUSD4-205ENST00000530903 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
RPUSD4-205ENST00000530903 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
RPUSD4-205ENST00000530903 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
RPUSD4-205ENST00000530903 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
RPUSD4-205ENST00000530903 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
RPUSD4-205ENST00000530903 TROQ12816 1431 aaPredicted RBP15.43■□□□□ 0.06
RPUSD4-205ENST00000530903 PLEKHD1A6NEE1 506 aa15.43■□□□□ 0.06
RPUSD4-205ENST00000530903 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
RPUSD4-205ENST00000530903 KIF14Q15058 1648 aa15.41■□□□□ 0.06
RPUSD4-205ENST00000530903 NCOA2Q15596 1464 aa15.4■□□□□ 0.06
RPUSD4-205ENST00000530903 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
RPUSD4-205ENST00000530903 ASXL2Q76L83 1435 aa15.38■□□□□ 0.05
RPUSD4-205ENST00000530903 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.05
RPUSD4-205ENST00000530903 WDR7Q9Y4E6 1490 aa15.37■□□□□ 0.05
RPUSD4-205ENST00000530903 PHLDB1Q86UU1 1377 aa15.37■□□□□ 0.05
RPUSD4-205ENST00000530903 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
RPUSD4-205ENST00000530903 MAPKBP1O60336 1514 aa15.34■□□□□ 0.05
RPUSD4-205ENST00000530903 TTC37Q6PGP7 1564 aa15.33■□□□□ 0.04
RPUSD4-205ENST00000530903 ABCC10Q5T3U5 1492 aa15.32■□□□□ 0.04
RPUSD4-205ENST00000530903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.31■□□□□ 0.04
RPUSD4-205ENST00000530903 CCNB3Q8WWL7 1395 aa15.31■□□□□ 0.04
RPUSD4-205ENST00000530903 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
RPUSD4-205ENST00000530903 ITSN2Q9NZM3 1697 aa15.3■□□□□ 0.04
RPUSD4-205ENST00000530903 CDC42BPAQ5VT25 1732 aa15.3■□□□□ 0.04
RPUSD4-205ENST00000530903 TRIM26Q12899 539 aaPredicted RBP15.3■□□□□ 0.04
RPUSD4-205ENST00000530903 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
RPUSD4-205ENST00000530903 FGD6Q6ZV73 1430 aa15.27■□□□□ 0.04
RPUSD4-205ENST00000530903 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.04
RPUSD4-205ENST00000530903 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.03
RPUSD4-205ENST00000530903 SPDYE2BA6NHP3 402 aa15.26■□□□□ 0.03
RPUSD4-205ENST00000530903 SPDYE6P0CI01 402 aa15.26■□□□□ 0.03
RPUSD4-205ENST00000530903 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
RPUSD4-205ENST00000530903 PREX2Q70Z35 1606 aa15.26■□□□□ 0.03
RPUSD4-205ENST00000530903 ABCA9Q8IUA7 1624 aa15.26■□□□□ 0.03
RPUSD4-205ENST00000530903 CDC42BPBQ9Y5S2 1711 aa15.26■□□□□ 0.03
RPUSD4-205ENST00000530903 PTPN23Q9H3S7 1636 aa15.26■□□□□ 0.03
RPUSD4-205ENST00000530903 DIP2BQ9P265 1576 aa15.23■□□□□ 0.03
RPUSD4-205ENST00000530903 FAM50AQ14320 339 aaKnown RBP15.23■□□□□ 0.03
RPUSD4-205ENST00000530903 PCGF6Q9BYE7 350 aa15.23■□□□□ 0.03
RPUSD4-205ENST00000530903 CFDP1Q9UEE9 299 aaPredicted RBP15.22■□□□□ 0.03
RPUSD4-205ENST00000530903 MIA2Q96PC5 1412 aa15.22■□□□□ 0.03
RPUSD4-205ENST00000530903 ARHGAP5Q13017 1502 aa15.22■□□□□ 0.03
RPUSD4-205ENST00000530903 ZNF777Q9ULD5 760 aaPredicted RBP15.2■□□□□ 0.02
RPUSD4-205ENST00000530903 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
RPUSD4-205ENST00000530903 GLI2P10070 1586 aa15.2■□□□□ 0.02
RPUSD4-205ENST00000530903 KIF13AQ9H1H9 1805 aa15.2■□□□□ 0.02
RPUSD4-205ENST00000530903 PLCH2O75038 1416 aa15.19■□□□□ 0.02
RPUSD4-205ENST00000530903 CAMSAP2Q08AD1 1489 aa15.19■□□□□ 0.02
RPUSD4-205ENST00000530903 ZNF644Q9H582 1327 aaPredicted RBP15.19■□□□□ 0.02
RPUSD4-205ENST00000530903 MAP3K4Q9Y6R4 1608 aa15.18■□□□□ 0.02
RPUSD4-205ENST00000530903 CD109Q6YHK3 1445 aa15.18■□□□□ 0.02
RPUSD4-205ENST00000530903 FAM69CQ0P6D2 419 aa15.17■□□□□ 0.02
RPUSD4-205ENST00000530903 SAMD9LQ8IVG5 1584 aa15.17■□□□□ 0.02
RPUSD4-205ENST00000530903 ITGAEP38570 1179 aa15.17■□□□□ 0.02
RPUSD4-205ENST00000530903 ARAP3Q8WWN8 1544 aa15.16■□□□□ 0.02
RPUSD4-205ENST00000530903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.16■□□□□ 0.02
RPUSD4-205ENST00000530903 TSPOAP1O95153 1857 aa15.16■□□□□ 0.02
RPUSD4-205ENST00000530903 EFCAB2Q5VUJ9 269 aa15.14■□□□□ 0.01
RPUSD4-205ENST00000530903 FANCAO15360 1455 aa15.14■□□□□ 0.01
RPUSD4-205ENST00000530903 DNMT1P26358 1616 aaKnown RBP15.12■□□□□ 0.01
RPUSD4-205ENST00000530903 MKRN4PQ13434 485 aaPredicted RBP15.12■□□□□ 0.01
RPUSD4-205ENST00000530903 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
RPUSD4-205ENST00000530903 CFAP74Q9C0B2 1584 aa15.12■□□□□ 0.01
RPUSD4-205ENST00000530903 PPRC1Q5VV67 1664 aaKnown RBP15.11■□□□□ 0.01
RPUSD4-205ENST00000530903 ABCC1P33527 1531 aa15.11■□□□□ 0.01
RPUSD4-205ENST00000530903 CROCC2H7BZ55 1655 aa15.1■□□□□ 0.01
RPUSD4-205ENST00000530903 HNRNPMP52272 730 aaKnown RBP eCLIP15.09■□□□□ 0.01
RPUSD4-205ENST00000530903 DAPK1P53355 1430 aa15.09■□□□□ 0.01
RPUSD4-205ENST00000530903 PLEKHH2Q8IVE3 1493 aa15.09■□□□□ 0.01
RPUSD4-205ENST00000530903 PTPRKQ15262 1439 aa15.08■□□□□ 0.01
RPUSD4-205ENST00000530903 ARHGEF12Q9NZN5 1544 aa15.08■□□□□ 0
RPUSD4-205ENST00000530903 ARHGEF5Q12774 1597 aa15.08■□□□□ 0
RPUSD4-205ENST00000530903 ABCC5O15440 1437 aa15.07■□□□□ 0
RPUSD4-205ENST00000530903 AKNAQ7Z591 1439 aa15.07■□□□□ 0
RPUSD4-205ENST00000530903 ADGRL1O94910 1474 aa15.07■□□□□ 0
RPUSD4-205ENST00000530903 POTEMA6NI47 508 aa15.07■□□□□ 0
RPUSD4-205ENST00000530903 GABBR2O75899 941 aa15.07■□□□□ 0
RPUSD4-205ENST00000530903 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
RPUSD4-205ENST00000530903 MBD5Q9P267 1494 aa15.07■□□□□ 0
RPUSD4-205ENST00000530903 SSUH2Q9Y2M2 353 aa15.06■□□□□ 0
RPUSD4-205ENST00000530903 CCDC141Q6ZP82 1450 aa15.05■□□□□ -0
RPUSD4-205ENST00000530903 NEO1Q92859 1461 aa15.05■□□□□ -0
RPUSD4-205ENST00000530903 CHIC2Q9UKJ5 165 aa15.05■□□□□ -0
RPUSD4-205ENST00000530903 SCAPERQ9BY12 1400 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms