RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CDC42BPBQ9Y5S2 1711 aa20.02■□□□□ 0.8
CCDC90B-216ENST00000529856 EHBP1L1Q8N3D4 1523 aa20.02■□□□□ 0.79
CCDC90B-216ENST00000529856 ADGRL1O94910 1474 aa20.01■□□□□ 0.79
CCDC90B-216ENST00000529856 CDC42BPAQ5VT25 1732 aa20■□□□□ 0.79
CCDC90B-216ENST00000529856 PREX2Q70Z35 1606 aa20■□□□□ 0.79
CCDC90B-216ENST00000529856 MAP3K1Q13233 1512 aa20■□□□□ 0.79
CCDC90B-216ENST00000529856 SCAPERQ9BY12 1400 aa20■□□□□ 0.79
CCDC90B-216ENST00000529856 GPATCH8Q9UKJ3 1502 aaKnown RBP19.99■□□□□ 0.79
CCDC90B-216ENST00000529856 FRMPD1Q5SYB0 1578 aa19.99■□□□□ 0.79
CCDC90B-216ENST00000529856 RICTORQ6R327 1708 aa19.98■□□□□ 0.79
CCDC90B-216ENST00000529856 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
CCDC90B-216ENST00000529856 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
CCDC90B-216ENST00000529856 KANK4Q5T7N3 995 aaPredicted RBP19.95■□□□□ 0.78
CCDC90B-216ENST00000529856 APLP2Q06481 763 aa19.94■□□□□ 0.78
CCDC90B-216ENST00000529856 CFDP1Q9UEE9 299 aaPredicted RBP19.94■□□□□ 0.78
CCDC90B-216ENST00000529856 POGZQ7Z3K3 1410 aa19.93■□□□□ 0.78
CCDC90B-216ENST00000529856 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
CCDC90B-216ENST00000529856 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
CCDC90B-216ENST00000529856 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
CCDC90B-216ENST00000529856 ZMYM4Q5VZL5 1548 aa19.91■□□□□ 0.78
CCDC90B-216ENST00000529856 AFAP1Q8N556 730 aa19.9■□□□□ 0.78
CCDC90B-216ENST00000529856 ABCC1P33527 1531 aa19.89■□□□□ 0.77
CCDC90B-216ENST00000529856 ARHGEF12Q9NZN5 1544 aa19.89■□□□□ 0.77
CCDC90B-216ENST00000529856 SAMD9LQ8IVG5 1584 aa19.88■□□□□ 0.77
CCDC90B-216ENST00000529856 ZNF518AQ6AHZ1 1483 aa19.88■□□□□ 0.77
CCDC90B-216ENST00000529856 MAGI2Q86UL8 1455 aa19.88■□□□□ 0.77
CCDC90B-216ENST00000529856 KDM4FA0A1W2PPD8 638 aa19.88■□□□□ 0.77
CCDC90B-216ENST00000529856 ITSN2Q9NZM3 1697 aa19.87■□□□□ 0.77
CCDC90B-216ENST00000529856 TRAPPC8Q9Y2L5 1435 aa19.86■□□□□ 0.77
CCDC90B-216ENST00000529856 KIAA1107Q9UPP5 1409 aa19.85■□□□□ 0.77
CCDC90B-216ENST00000529856 PLEKHH2Q8IVE3 1493 aa19.85■□□□□ 0.77
CCDC90B-216ENST00000529856 YEATS2Q9ULM3 1422 aa19.85■□□□□ 0.77
CCDC90B-216ENST00000529856 ZNF644Q9H582 1327 aaPredicted RBP19.84■□□□□ 0.77
CCDC90B-216ENST00000529856 KDM5CP41229 1560 aa19.84■□□□□ 0.77
CCDC90B-216ENST00000529856 HNRNPMP52272 730 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCDC90B-216ENST00000529856 ZFYVE16Q7Z3T8 1539 aa19.84■□□□□ 0.77
CCDC90B-216ENST00000529856 ARHGEF40Q8TER5 1519 aa19.84■□□□□ 0.77
CCDC90B-216ENST00000529856 SYCP2Q9BX26 1530 aa19.81■□□□□ 0.76
CCDC90B-216ENST00000529856 MLH3Q9UHC1 1453 aa19.8■□□□□ 0.76
CCDC90B-216ENST00000529856 MYT1LQ9UL68 1186 aa19.8■□□□□ 0.76
CCDC90B-216ENST00000529856 HECW2Q9P2P5 1572 aa19.78■□□□□ 0.76
CCDC90B-216ENST00000529856 ATP10AO60312 1499 aa19.78■□□□□ 0.76
CCDC90B-216ENST00000529856 MBD5Q9P267 1494 aa19.77■□□□□ 0.76
CCDC90B-216ENST00000529856 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
CCDC90B-216ENST00000529856 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
CCDC90B-216ENST00000529856 SPAG9O60271 1321 aaKnown RBP19.76■□□□□ 0.75
CCDC90B-216ENST00000529856 CAMSAP2Q08AD1 1489 aa19.75■□□□□ 0.75
CCDC90B-216ENST00000529856 MIA2Q96PC5 1412 aa19.75■□□□□ 0.75
CCDC90B-216ENST00000529856 RSPH4AQ5TD94 716 aa19.74■□□□□ 0.75
CCDC90B-216ENST00000529856 C9orf84Q5VXU9 1444 aa19.74■□□□□ 0.75
CCDC90B-216ENST00000529856 KIDINS220Q9ULH0 1771 aa19.73■□□□□ 0.75
CCDC90B-216ENST00000529856 DIP2CQ9Y2E4 1556 aa19.72■□□□□ 0.75
CCDC90B-216ENST00000529856 SIGLEC1Q9BZZ2 1709 aa19.71■□□□□ 0.75
CCDC90B-216ENST00000529856 ABCA6Q8N139 1617 aa19.71■□□□□ 0.75
CCDC90B-216ENST00000529856 BCORL1Q5H9F3 1711 aa19.7■□□□□ 0.74
CCDC90B-216ENST00000529856 FOXD1Q16676 465 aa19.69■□□□□ 0.74
CCDC90B-216ENST00000529856 ADAMTSL3P82987 1691 aa19.68■□□□□ 0.74
CCDC90B-216ENST00000529856 ATP7AQ04656 1500 aa19.68■□□□□ 0.74
CCDC90B-216ENST00000529856 REREQ9P2R6 1566 aa19.68■□□□□ 0.74
CCDC90B-216ENST00000529856 CCDC141Q6ZP82 1450 aa19.67■□□□□ 0.74
CCDC90B-216ENST00000529856 ARHGEF5Q12774 1597 aa19.67■□□□□ 0.74
CCDC90B-216ENST00000529856 INO80Q9ULG1 1556 aaPredicted RBP19.67■□□□□ 0.74
CCDC90B-216ENST00000529856 RTEL1-TNFRSF6BF6WH68 1400 aa19.67■□□□□ 0.74
CCDC90B-216ENST00000529856 MLECQ14165 292 aa19.65■□□□□ 0.74
CCDC90B-216ENST00000529856 TSPY4P0CV99 314 aa19.64■□□□□ 0.73
CCDC90B-216ENST00000529856 TSPY10P0CW01 314 aa19.64■□□□□ 0.73
CCDC90B-216ENST00000529856 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
CCDC90B-216ENST00000529856 PTPN23Q9H3S7 1636 aa19.63■□□□□ 0.73
CCDC90B-216ENST00000529856 AGLP35573 1532 aa19.63■□□□□ 0.73
CCDC90B-216ENST00000529856 PPARGC1BQ86YN6 1023 aaKnown RBP19.61■□□□□ 0.73
CCDC90B-216ENST00000529856 MADDQ8WXG6 1647 aa19.61■□□□□ 0.73
CCDC90B-216ENST00000529856 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
CCDC90B-216ENST00000529856 A2MP01023 1474 aa19.6■□□□□ 0.73
CCDC90B-216ENST00000529856 PTPRMP28827 1452 aa19.59■□□□□ 0.73
CCDC90B-216ENST00000529856 ADGBQ8N7X0 1667 aa19.58■□□□□ 0.72
CCDC90B-216ENST00000529856 DHX29Q7Z478 1369 aaKnown RBP19.57■□□□□ 0.72
CCDC90B-216ENST00000529856 ABCC5O15440 1437 aa19.56■□□□□ 0.72
CCDC90B-216ENST00000529856 PLXNC1O60486 1568 aa19.56■□□□□ 0.72
CCDC90B-216ENST00000529856 MAST1Q9Y2H9 1570 aa19.56■□□□□ 0.72
CCDC90B-216ENST00000529856 RIMS1Q86UR5 1692 aaKnown RBP19.55■□□□□ 0.72
CCDC90B-216ENST00000529856 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
CCDC90B-216ENST00000529856 FAM50AQ14320 339 aaKnown RBP19.53■□□□□ 0.72
CCDC90B-216ENST00000529856 DAPK1P53355 1430 aa19.52■□□□□ 0.72
CCDC90B-216ENST00000529856 DNMT1P26358 1616 aaKnown RBP19.52■□□□□ 0.72
CCDC90B-216ENST00000529856 SHANK2Q9UPX8 1470 aa19.51■□□□□ 0.71
CCDC90B-216ENST00000529856 CROCC2H7BZ55 1655 aa19.5■□□□□ 0.71
CCDC90B-216ENST00000529856 GGT6Q6P531 493 aa19.48■□□□□ 0.71
CCDC90B-216ENST00000529856 ESF1Q9H501 851 aaKnown RBP19.48■□□□□ 0.71
CCDC90B-216ENST00000529856 KIF3BO15066 747 aa19.47■□□□□ 0.71
CCDC90B-216ENST00000529856 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
CCDC90B-216ENST00000529856 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
CCDC90B-216ENST00000529856 CHIC2Q9UKJ5 165 aa19.46■□□□□ 0.71
CCDC90B-216ENST00000529856 CEBPAP49715 358 aaPredicted RBP19.45■□□□□ 0.7
CCDC90B-216ENST00000529856 RRP7BPQ9NSQ0 103 aa19.45■□□□□ 0.7
CCDC90B-216ENST00000529856 CNTLNQ9NXG0 1405 aa19.44■□□□□ 0.7
CCDC90B-216ENST00000529856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCDC90B-216ENST00000529856 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
CCDC90B-216ENST00000529856 ANKRD30AQ9BXX3 1397 aa19.43■□□□□ 0.7
CCDC90B-216ENST00000529856 DUOX2Q9NRD8 1548 aa19.42■□□□□ 0.7
CCDC90B-216ENST00000529856 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms